RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 S100A7L2Q5SY68 101 aa8.2□□□□□ -1.1
RFC3-201ENST00000380071 C9orf153Q5TBE3 101 aa8.2□□□□□ -1.1
RFC3-201ENST00000380071 LYPD5Q6UWN5 251 aa8.2□□□□□ -1.1
RFC3-201ENST00000380071 WFDC9Q8NEX5 89 aa8.2□□□□□ -1.1
RFC3-201ENST00000380071 ANK2Q01484 3957 aa8.19□□□□□ -1.1
RFC3-201ENST00000380071 A0A1B0GX51 115 aa8.19□□□□□ -1.1
RFC3-201ENST00000380071 UQCRQO14949 82 aa8.19□□□□□ -1.1
RFC3-201ENST00000380071 C2orf48Q96LS8 159 aa8.19□□□□□ -1.1
RFC3-201ENST00000380071 A0A0J9YWU9 116 aa8.18□□□□□ -1.1
RFC3-201ENST00000380071 A0A087WVE0 104 aa8.18□□□□□ -1.1
RFC3-201ENST00000380071 TMEM256-PLSCR3K7ERE1 68 aa8.18□□□□□ -1.1
RFC3-201ENST00000380071 CCKP06307 115 aa8.18□□□□□ -1.1
RFC3-201ENST00000380071 RPL18AQ02543 176 aaKnown RBP8.17□□□□□ -1.1
RFC3-201ENST00000380071 Q6JHZ5 121 aa8.17□□□□□ -1.1
RFC3-201ENST00000380071 COX7CP15954 63 aa8.17□□□□□ -1.1
RFC3-201ENST00000380071 LINC00575Q6W349 94 aa8.17□□□□□ -1.1
RFC3-201ENST00000380071 RETNQ9HD89 108 aa8.17□□□□□ -1.1
RFC3-201ENST00000380071 C6orf48Q9UBA6 75 aa8.16□□□□□ -1.1
RFC3-201ENST00000380071 JMJD7-PLA2G4BH0Y9G9 81 aa8.15□□□□□ -1.1
RFC3-201ENST00000380071 ATOX1O00244 68 aa8.15□□□□□ -1.1
RFC3-201ENST00000380071 OXLD1Q5BKU9 147 aa8.15□□□□□ -1.1
RFC3-201ENST00000380071 WFDC10BQ8IUB3 73 aa8.15□□□□□ -1.1
RFC3-201ENST00000380071 XAGE1AQ9HD64 81 aa8.15□□□□□ -1.1
RFC3-201ENST00000380071 WIPF1O43516 503 aa8.14□□□□□ -1.11
RFC3-201ENST00000380071 IGLV6-57P01721 117 aa8.14□□□□□ -1.11
RFC3-201ENST00000380071 CYSTM1Q9H1C7 97 aa8.14□□□□□ -1.11
RFC3-201ENST00000380071 hADV29S1A0JD25 119 aa8.13□□□□□ -1.11
RFC3-201ENST00000380071 PKD1L1Q8TDX9 2849 aa8.13□□□□□ -1.11
RFC3-201ENST00000380071 HIGD2BQ4VC39 106 aa8.13□□□□□ -1.11
RFC3-201ENST00000380071 KPRPQ5T749 579 aaPredicted RBP8.13□□□□□ -1.11
RFC3-201ENST00000380071 GVQW2A0A096LPI5 108 aaPredicted RBP8.12□□□□□ -1.11
RFC3-201ENST00000380071 KRTAP10-11P60412 298 aa8.12□□□□□ -1.11
RFC3-201ENST00000380071 TRBV10-3A0A0K0K1G6 114 aa8.12□□□□□ -1.11
RFC3-201ENST00000380071 MUC7Q8TAX7 377 aa8.12□□□□□ -1.11
RFC3-201ENST00000380071 CRYGAP11844 174 aa8.11□□□□□ -1.11
RFC3-201ENST00000380071 Q6ZTC4 211 aa8.11□□□□□ -1.11
RFC3-201ENST00000380071 CMYA5Q8N3K9 4069 aa8.11□□□□□ -1.11
RFC3-201ENST00000380071 KRTAP26-1Q6PEX3 210 aa8.1□□□□□ -1.11
RFC3-201ENST00000380071 USP17L23D6RBM5 183 aa8.1□□□□□ -1.11
RFC3-201ENST00000380071 ZNF561-AS1K7EIQ3 104 aa8.09□□□□□ -1.11
RFC3-201ENST00000380071 Q6ZQY7 126 aa8.09□□□□□ -1.11
RFC3-201ENST00000380071 RBM3P98179 157 aaKnown RBP8.09□□□□□ -1.11
RFC3-201ENST00000380071 CAMK2N2Q96S95 79 aa8.09□□□□□ -1.11
RFC3-201ENST00000380071 LAMTOR3Q9UHA4 124 aa8.09□□□□□ -1.11
RFC3-201ENST00000380071 TRAV23DV6A0A075B6W5 121 aa8.08□□□□□ -1.12
RFC3-201ENST00000380071 M0R2N4 97 aa8.08□□□□□ -1.12
RFC3-201ENST00000380071 ESRGQ1W209 222 aa8.08□□□□□ -1.12
RFC3-201ENST00000380071 Q6ZRU5 148 aa8.08□□□□□ -1.12
RFC3-201ENST00000380071 Q6ZQT0 140 aa8.07□□□□□ -1.12
RFC3-201ENST00000380071 SERP2Q8N6R1 65 aa8.07□□□□□ -1.12
RFC3-201ENST00000380071 UPK3BQ9BT76 320 aa8.07□□□□□ -1.12
RFC3-201ENST00000380071 LOC107984640A0A0U1RRK4 108 aa8.06□□□□□ -1.12
RFC3-201ENST00000380071 H3BNG1 76 aa8.06□□□□□ -1.12
RFC3-201ENST00000380071 C15orf56Q8N910 161 aa8.06□□□□□ -1.12
RFC3-201ENST00000380071 DIRC1Q969H9 104 aa8.06□□□□□ -1.12
RFC3-201ENST00000380071 ZNF73O43830 326 aaPredicted RBP8.05□□□□□ -1.12
RFC3-201ENST00000380071 VPREB1P12018 145 aa8.05□□□□□ -1.12
RFC3-201ENST00000380071 FAM19A1Q7Z5A9 133 aa8.05□□□□□ -1.12
RFC3-201ENST00000380071 TENM3Q9P273 2699 aa8.05□□□□□ -1.12
RFC3-201ENST00000380071 UBL5Q9BZL1 73 aa8.04□□□□□ -1.12
RFC3-201ENST00000380071 LOC110117498A0A087WWA1 95 aa8.03□□□□□ -1.12
RFC3-201ENST00000380071 EGFEM1PQ0D2K5 195 aa8.03□□□□□ -1.12
RFC3-201ENST00000380071 ATP5EP2Q5VTU8 51 aa8.03□□□□□ -1.12
RFC3-201ENST00000380071 COX7BP24311 80 aa8.03□□□□□ -1.12
RFC3-201ENST00000380071 DSCR8Q96T75 97 aa8.02□□□□□ -1.13
RFC3-201ENST00000380071 NDUFC2-KCTD14E9PQ53 114 aa8.02□□□□□ -1.13
RFC3-201ENST00000380071 ELOF1P60002 83 aaKnown RBP8.02□□□□□ -1.13
RFC3-201ENST00000380071 Q6ZRP5 223 aa8.02□□□□□ -1.13
RFC3-201ENST00000380071 IGKV2D-24A0A075B6R9 120 aa8.01□□□□□ -1.13
RFC3-201ENST00000380071 C1orf43Q9BWL3 253 aa8.01□□□□□ -1.13
RFC3-201ENST00000380071 DEFB131BA0A096LNP1 70 aa8.01□□□□□ -1.13
RFC3-201ENST00000380071 M0R378 163 aa8.01□□□□□ -1.13
RFC3-201ENST00000380071 FBN1P35555 2871 aaKnown RBP8□□□□□ -1.13
RFC3-201ENST00000380071 GHRHP01286 108 aa8□□□□□ -1.13
RFC3-201ENST00000380071 J3KT08 172 aa8□□□□□ -1.13
RFC3-201ENST00000380071 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8□□□□□ -1.13
RFC3-201ENST00000380071 KRTAP24-1Q3LI83 254 aa7.99□□□□□ -1.13
RFC3-201ENST00000380071 F8P00451 2351 aa7.99□□□□□ -1.13
RFC3-201ENST00000380071 LINC01556Q5JQF7 62 aa7.99□□□□□ -1.13
RFC3-201ENST00000380071 C11orf45Q8TAV5 145 aa7.99□□□□□ -1.13
RFC3-201ENST00000380071 DNAH3Q8TD57 4116 aa7.99□□□□□ -1.13
RFC3-201ENST00000380071 TMEM258P61165 79 aa7.98□□□□□ -1.13
RFC3-201ENST00000380071 Q6ZVQ6 151 aa7.98□□□□□ -1.13
RFC3-201ENST00000380071 HAMPP81172 84 aa7.98□□□□□ -1.13
RFC3-201ENST00000380071 STAB1Q9NY15 2570 aa7.97□□□□□ -1.13
RFC3-201ENST00000380071 TRBV7-6A0A0J9YX20 115 aa7.97□□□□□ -1.13
RFC3-201ENST00000380071 LINC01547P58512 204 aaPredicted RBP7.97□□□□□ -1.13
RFC3-201ENST00000380071 H3BQ85 93 aa7.97□□□□□ -1.13
RFC3-201ENST00000380071 LINC00528Q8N1L1 170 aa7.97□□□□□ -1.13
RFC3-201ENST00000380071 TRBV7-4A0A0J9YYF1 115 aa7.96□□□□□ -1.14
RFC3-201ENST00000380071 SYCNQ0VAF6 134 aa7.96□□□□□ -1.14
RFC3-201ENST00000380071 DNAH1Q9P2D7 4330 aa7.96□□□□□ -1.14
RFC3-201ENST00000380071 PDE6GP18545 87 aa7.95□□□□□ -1.14
RFC3-201ENST00000380071 FAM19A5Q7Z5A7 132 aaPredicted RBP7.95□□□□□ -1.14
RFC3-201ENST00000380071 DPH3Q96FX2 82 aa7.95□□□□□ -1.14
RFC3-201ENST00000380071 SERTAD4-AS1Q5TG53 156 aa7.95□□□□□ -1.14
RFC3-201ENST00000380071 OXTP01178 125 aa7.94□□□□□ -1.14
RFC3-201ENST00000380071 FLNBO75369 2602 aaKnown RBP7.94□□□□□ -1.14
RFC3-201ENST00000380071 RPS28P62857 69 aaKnown RBP7.94□□□□□ -1.14
RFC3-201ENST00000380071 PRB2P02812 416 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms