RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 SPINT4Q6UDR6 99 aa9.74□□□□□ -0.85
TRIM13-202ENST00000378182 KIF25-AS1Q9Y6Z4 181 aa9.73□□□□□ -0.85
TRIM13-202ENST00000378182 LINC00588Q9Y4M8 146 aa9.72□□□□□ -0.85
TRIM13-202ENST00000378182 WDR87Q6ZQQ6 2873 aa9.72□□□□□ -0.85
TRIM13-202ENST00000378182 EP400Q96L91 3159 aa9.72□□□□□ -0.85
TRIM13-202ENST00000378182 C2CD3Q4AC94 2353 aa9.71□□□□□ -0.86
TRIM13-202ENST00000378182 ST20-AS1Q8NBB2 130 aa9.71□□□□□ -0.86
TRIM13-202ENST00000378182 LINC00846Q9NV44 126 aa9.71□□□□□ -0.86
TRIM13-202ENST00000378182 GOLGB1Q14789 3259 aaKnown RBP9.71□□□□□ -0.86
TRIM13-202ENST00000378182 FAM168BA1KXE4 195 aa9.71□□□□□ -0.86
TRIM13-202ENST00000378182 CDIP1Q9H305 208 aa9.7□□□□□ -0.86
TRIM13-202ENST00000378182 SPATA3Q8NHX4 192 aa9.69□□□□□ -0.86
TRIM13-202ENST00000378182 YPEL4Q96NS1 127 aa9.69□□□□□ -0.86
TRIM13-202ENST00000378182 APLNQ9ULZ1 77 aa9.69□□□□□ -0.86
TRIM13-202ENST00000378182 Q8NBF4 154 aa9.68□□□□□ -0.86
TRIM13-202ENST00000378182 LINC00476Q8WZB0 136 aa9.68□□□□□ -0.86
TRIM13-202ENST00000378182 URB1-AS1Q96HZ7 61 aa9.68□□□□□ -0.86
TRIM13-202ENST00000378182 LINC01561Q8N1V8 128 aa9.67□□□□□ -0.86
TRIM13-202ENST00000378182 C11orf72Q8NBR9 251 aa9.67□□□□□ -0.86
TRIM13-202ENST00000378182 PCSK5Q92824 1860 aa9.67□□□□□ -0.86
TRIM13-202ENST00000378182 ZFYVE26Q68DK2 2539 aa9.66□□□□□ -0.86
TRIM13-202ENST00000378182 MYO9AB2RTY4 2548 aa9.65□□□□□ -0.86
TRIM13-202ENST00000378182 COL4A2P08572 1712 aa9.65□□□□□ -0.86
TRIM13-202ENST00000378182 NAV2Q8IVL1 2488 aa9.64□□□□□ -0.87
TRIM13-202ENST00000378182 DNAH10OSP0CZ25 163 aa9.63□□□□□ -0.87
TRIM13-202ENST00000378182 TP53AIP1Q9HCN2 124 aa9.63□□□□□ -0.87
TRIM13-202ENST00000378182 BCE1O60756 84 aa9.62□□□□□ -0.87
TRIM13-202ENST00000378182 CXCL6P80162 114 aa9.62□□□□□ -0.87
TRIM13-202ENST00000378182 IGF2RP11717 2491 aa9.62□□□□□ -0.87
TRIM13-202ENST00000378182 SSBP3-AS1Q7Z2R9 100 aa9.61□□□□□ -0.87
TRIM13-202ENST00000378182 LINC01554Q52M75 96 aa9.61□□□□□ -0.87
TRIM13-202ENST00000378182 FN1P02751 2386 aaKnown RBP9.6□□□□□ -0.87
TRIM13-202ENST00000378182 DSCR10P59022 87 aa9.59□□□□□ -0.87
TRIM13-202ENST00000378182 OBSCN-AS1Q96MR7 158 aa9.59□□□□□ -0.87
TRIM13-202ENST00000378182 IGLV6-57P01721 117 aa9.58□□□□□ -0.88
TRIM13-202ENST00000378182 Q6ZRX8 168 aa9.57□□□□□ -0.88
TRIM13-202ENST00000378182 TRAV22A0A0B4J277 110 aa9.57□□□□□ -0.88
TRIM13-202ENST00000378182 Q8NAQ8 132 aa9.57□□□□□ -0.88
TRIM13-202ENST00000378182 ELOF1P60002 83 aaKnown RBP9.56□□□□□ -0.88
TRIM13-202ENST00000378182 KRTAP10-11P60412 298 aa9.56□□□□□ -0.88
TRIM13-202ENST00000378182 LINC00304Q8N9R0 145 aa9.56□□□□□ -0.88
TRIM13-202ENST00000378182 IGHV3OR16-9A0A0B4J2B5 98 aa9.55□□□□□ -0.88
TRIM13-202ENST00000378182 LINC00310P59036 64 aa9.54□□□□□ -0.88
TRIM13-202ENST00000378182 FAM19A4Q96LR4 140 aa9.53□□□□□ -0.88
TRIM13-202ENST00000378182 H3BNG1 76 aa9.53□□□□□ -0.88
TRIM13-202ENST00000378182 ANAPC11Q9NYG5 84 aa9.53□□□□□ -0.88
TRIM13-202ENST00000378182 A0A096LNJ9 63 aa9.52□□□□□ -0.89
TRIM13-202ENST00000378182 IGLV5-37A0A075B6J1 123 aa9.52□□□□□ -0.89
TRIM13-202ENST00000378182 FAM218AQ96MZ4 157 aa9.52□□□□□ -0.89
TRIM13-202ENST00000378182 K7EIL1 84 aa9.51□□□□□ -0.89
TRIM13-202ENST00000378182 TM2D3Q9BRN9 247 aa9.51□□□□□ -0.89
TRIM13-202ENST00000378182 JMJD1CQ15652 2540 aa9.51□□□□□ -0.89
TRIM13-202ENST00000378182 TLN1Q9Y490 2541 aaKnown RBP9.51□□□□□ -0.89
TRIM13-202ENST00000378182 K7EQZ3 153 aa9.5□□□□□ -0.89
TRIM13-202ENST00000378182 NCOR2Q9Y618 2525 aa9.49□□□□□ -0.89
TRIM13-202ENST00000378182 IGLV5-39A0A0G2JS06 123 aa9.48□□□□□ -0.89
TRIM13-202ENST00000378182 CENPFP49454 3210 aa9.47□□□□□ -0.89
TRIM13-202ENST00000378182 M0R2T5 61 aa9.47□□□□□ -0.89
TRIM13-202ENST00000378182 RBM12B-AS1Q9P1G2 102 aa9.47□□□□□ -0.89
TRIM13-202ENST00000378182 GVQW2A0A096LPI5 108 aaPredicted RBP9.47□□□□□ -0.89
TRIM13-202ENST00000378182 COX8CQ7Z4L0 72 aa9.47□□□□□ -0.89
TRIM13-202ENST00000378182 PIEZO1Q92508 2521 aa9.46□□□□□ -0.89
TRIM13-202ENST00000378182 A0A0D9SG42 100 aa9.46□□□□□ -0.9
TRIM13-202ENST00000378182 Q6ZQT0 140 aa9.46□□□□□ -0.9
TRIM13-202ENST00000378182 LINC01600Q96MT4 127 aa9.45□□□□□ -0.9
TRIM13-202ENST00000378182 A0A0G2JQZ4 141 aa9.44□□□□□ -0.9
TRIM13-202ENST00000378182 A0A1W2PNN7 141 aa9.44□□□□□ -0.9
TRIM13-202ENST00000378182 ABCA12Q86UK0 2595 aa9.43□□□□□ -0.9
TRIM13-202ENST00000378182 MRPL34Q9BQ48 92 aaKnown RBP9.43□□□□□ -0.9
TRIM13-202ENST00000378182 ANKRD17O75179 2603 aaKnown RBP9.43□□□□□ -0.9
TRIM13-202ENST00000378182 TRBV7-4A0A0J9YYF1 115 aa9.42□□□□□ -0.9
TRIM13-202ENST00000378182 C15orf56Q8N910 161 aa9.42□□□□□ -0.9
TRIM13-202ENST00000378182 C9orf129Q5T035 196 aaKnown RBP9.42□□□□□ -0.9
TRIM13-202ENST00000378182 C8orf87E5RJ46 101 aa9.41□□□□□ -0.9
TRIM13-202ENST00000378182 A8MWP4 228 aa9.41□□□□□ -0.9
TRIM13-202ENST00000378182 CRIPTQ9P021 101 aa9.4□□□□□ -0.9
TRIM13-202ENST00000378182 C4orf26Q17RF5 130 aa9.4□□□□□ -0.9
TRIM13-202ENST00000378182 A0A087WTM6 91 aa9.38□□□□□ -0.91
TRIM13-202ENST00000378182 ZNF575Q86XF7 245 aa9.37□□□□□ -0.91
TRIM13-202ENST00000378182 LINC00528Q8N1L1 170 aa9.36□□□□□ -0.91
TRIM13-202ENST00000378182 TLN2Q9Y4G6 2542 aa9.36□□□□□ -0.91
TRIM13-202ENST00000378182 ZNF861PO60384 105 aa9.35□□□□□ -0.91
TRIM13-202ENST00000378182 LOC101927531A0A1B0GV80 90 aa9.35□□□□□ -0.91
TRIM13-202ENST00000378182 KRTAP10-3P60369 221 aa9.35□□□□□ -0.91
TRIM13-202ENST00000378182 CSNK1G2-AS1Q8NCQ2 148 aa9.35□□□□□ -0.91
TRIM13-202ENST00000378182 IGLV1-50A0A075B6I6 118 aa9.34□□□□□ -0.91
TRIM13-202ENST00000378182 COA5Q86WW8 74 aa9.34□□□□□ -0.91
TRIM13-202ENST00000378182 VPREB1P12018 145 aa9.33□□□□□ -0.92
TRIM13-202ENST00000378182 IGFL1Q6UW32 110 aa9.32□□□□□ -0.92
TRIM13-202ENST00000378182 LOC110117498A0A087WWA1 95 aa9.32□□□□□ -0.92
TRIM13-202ENST00000378182 Q8N1X5 172 aa9.31□□□□□ -0.92
TRIM13-202ENST00000378182 F8P00451 2351 aa9.3□□□□□ -0.92
TRIM13-202ENST00000378182 H3BPC8 53 aa9.3□□□□□ -0.92
TRIM13-202ENST00000378182 UTRNP46939 3433 aa9.3□□□□□ -0.92
TRIM13-202ENST00000378182 LINC01546A6NGU7 62 aa9.3□□□□□ -0.92
TRIM13-202ENST00000378182 IGLV5-45A0A087WSX0 123 aa9.29□□□□□ -0.92
TRIM13-202ENST00000378182 C10orf142B7Z368 130 aa9.29□□□□□ -0.92
TRIM13-202ENST00000378182 LINC00336Q6ZUF6 198 aa9.28□□□□□ -0.92
TRIM13-202ENST00000378182 SETD2Q9BYW2 2564 aaPredicted RBP9.28□□□□□ -0.92
TRIM13-202ENST00000378182 C8orf17Q9NRJ1 99 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms