RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 LAMTOR3Q9UHA4 124 aa12.2□□□□□ -0.46
GNE-201ENST00000377902 RBM3P98179 157 aaKnown RBP12.19□□□□□ -0.46
GNE-201ENST00000377902 LYPD5Q6UWN5 251 aa12.19□□□□□ -0.46
GNE-201ENST00000377902 Q6ZQT0 140 aa12.19□□□□□ -0.46
GNE-201ENST00000377902 TMEM258P61165 79 aa12.18□□□□□ -0.46
GNE-201ENST00000377902 CYSRT1A8MQ03 144 aa12.18□□□□□ -0.46
GNE-201ENST00000377902 SPAG11BQ08648 103 aa12.18□□□□□ -0.46
GNE-201ENST00000377902 CELA1Q9UNI1 258 aa12.18□□□□□ -0.46
GNE-201ENST00000377902 HTN3P15516 51 aa12.17□□□□□ -0.46
GNE-201ENST00000377902 SMR3AQ99954 134 aa12.17□□□□□ -0.46
GNE-201ENST00000377902 RPS28P62857 69 aaKnown RBP12.16□□□□□ -0.46
GNE-201ENST00000377902 Q6ZQY7 126 aa12.16□□□□□ -0.46
GNE-201ENST00000377902 XAGE1AQ9HD64 81 aa12.16□□□□□ -0.46
GNE-201ENST00000377902 ATP5EP2Q5VTU8 51 aa12.15□□□□□ -0.47
GNE-201ENST00000377902 C20orf197Q8N268 126 aa12.15□□□□□ -0.47
GNE-201ENST00000377902 KLK12Q9UKR0 248 aa12.15□□□□□ -0.47
GNE-201ENST00000377902 HAMPP81172 84 aa12.14□□□□□ -0.47
GNE-201ENST00000377902 DAD1P61803 113 aa12.14□□□□□ -0.47
GNE-201ENST00000377902 TENM1Q9UKZ4 2725 aa12.14□□□□□ -0.47
GNE-201ENST00000377902 TRRAPQ9Y4A5 3859 aa12.13□□□□□ -0.47
GNE-201ENST00000377902 SMIM9A6NGZ8 99 aa12.13□□□□□ -0.47
GNE-201ENST00000377902 ZNF561-AS1K7EIQ3 104 aa12.13□□□□□ -0.47
GNE-201ENST00000377902 LYRM9A8MSI8 78 aa12.13□□□□□ -0.47
GNE-201ENST00000377902 IGLV6-57P01721 117 aa12.12□□□□□ -0.47
GNE-201ENST00000377902 TRBV10-3A0A0K0K1G6 114 aa12.12□□□□□ -0.47
GNE-201ENST00000377902 LINC01547P58512 204 aaPredicted RBP12.11□□□□□ -0.47
GNE-201ENST00000377902 Q6ZVQ6 151 aa12.1□□□□□ -0.47
GNE-201ENST00000377902 TRAV10A0A0B4J240 114 aa12.1□□□□□ -0.47
GNE-201ENST00000377902 LOC110117498A0A087WWA1 95 aa12.09□□□□□ -0.47
GNE-201ENST00000377902 A0A0J9YWU9 116 aa12.08□□□□□ -0.48
GNE-201ENST00000377902 IGHV4-30-4P0DP06 118 aa12.08□□□□□ -0.48
GNE-201ENST00000377902 C6orf48Q9UBA6 75 aa12.08□□□□□ -0.48
GNE-201ENST00000377902 SCXQ7RTU7 201 aa12.08□□□□□ -0.48
GNE-201ENST00000377902 HIVEP1P15822 2718 aa12.07□□□□□ -0.48
GNE-201ENST00000377902 C4orf26Q17RF5 130 aa12.06□□□□□ -0.48
GNE-201ENST00000377902 FASNP49327 2511 aaKnown RBP12.04□□□□□ -0.48
GNE-201ENST00000377902 PKD1L1Q8TDX9 2849 aa12.04□□□□□ -0.48
GNE-201ENST00000377902 HIGD2BQ4VC39 106 aa12.04□□□□□ -0.48
GNE-201ENST00000377902 Q8NAQ8 132 aa12.04□□□□□ -0.48
GNE-201ENST00000377902 LELP1Q5T871 98 aa12.04□□□□□ -0.48
GNE-201ENST00000377902 MUC7Q8TAX7 377 aa12.04□□□□□ -0.48
GNE-201ENST00000377902 PRR34Q9NV39 138 aa12.03□□□□□ -0.48
GNE-201ENST00000377902 DIRC1Q969H9 104 aa12.03□□□□□ -0.48
GNE-201ENST00000377902 HELZ2Q9BYK8 2649 aaKnown RBP12.03□□□□□ -0.48
GNE-201ENST00000377902 SNURFQ9Y675 71 aa12.02□□□□□ -0.48
GNE-201ENST00000377902 ZNF73O43830 326 aaPredicted RBP12.02□□□□□ -0.49
GNE-201ENST00000377902 C5orf47Q569G3 176 aa12.02□□□□□ -0.49
GNE-201ENST00000377902 Q5XG85 94 aa12.01□□□□□ -0.49
GNE-201ENST00000377902 UNC79Q9P2D8 2635 aa12□□□□□ -0.49
GNE-201ENST00000377902 H7BZZ5 65 aa11.99□□□□□ -0.49
GNE-201ENST00000377902 C9orf66Q5T8R8 295 aa11.99□□□□□ -0.49
GNE-201ENST00000377902 OTOGQ6ZRI0 2925 aa11.98□□□□□ -0.49
GNE-201ENST00000377902 TRAV7A0A075B6U4 112 aa11.98□□□□□ -0.49
GNE-201ENST00000377902 COX7BP24311 80 aa11.98□□□□□ -0.49
GNE-201ENST00000377902 RMI2Q96E14 147 aa11.98□□□□□ -0.49
GNE-201ENST00000377902 APOC4P55056 127 aa11.98□□□□□ -0.49
GNE-201ENST00000377902 SPART-AS1P0CW21 52 aa11.97□□□□□ -0.49
GNE-201ENST00000377902 HRCT1Q6UXD1 115 aa11.97□□□□□ -0.49
GNE-201ENST00000377902 ATRQ13535 2644 aa11.97□□□□□ -0.49
GNE-201ENST00000377902 NOTCH2Q04721 2471 aa11.96□□□□□ -0.49
GNE-201ENST00000377902 GVQW2A0A096LPI5 108 aaPredicted RBP11.96□□□□□ -0.49
GNE-201ENST00000377902 TRBV7-4A0A0J9YYF1 115 aa11.96□□□□□ -0.49
GNE-201ENST00000377902 FAM236DA0A1B0GTK5 79 aa11.96□□□□□ -0.5
GNE-201ENST00000377902 FAM236CP0DP71 79 aa11.96□□□□□ -0.5
GNE-201ENST00000377902 WFDC10BQ8IUB3 73 aa11.96□□□□□ -0.5
GNE-201ENST00000377902 TM2D3Q9BRN9 247 aa11.96□□□□□ -0.5
GNE-201ENST00000377902 ELOF1P60002 83 aaKnown RBP11.95□□□□□ -0.5
GNE-201ENST00000377902 NDUFC2-KCTD14E9PQ53 114 aa11.95□□□□□ -0.5
GNE-201ENST00000377902 CAMK2N2Q96S95 79 aa11.95□□□□□ -0.5
GNE-201ENST00000377902 VPREB1P12018 145 aa11.94□□□□□ -0.5
GNE-201ENST00000377902 Q8N9L7 120 aa11.94□□□□□ -0.5
GNE-201ENST00000377902 MIFP14174 115 aa11.94□□□□□ -0.5
GNE-201ENST00000377902 CXCL6P80162 114 aa11.94□□□□□ -0.5
GNE-201ENST00000377902 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.94□□□□□ -0.5
GNE-201ENST00000377902 Q6ZRU5 148 aa11.93□□□□□ -0.5
GNE-201ENST00000377902 PDE6GP18545 87 aa11.92□□□□□ -0.5
GNE-201ENST00000377902 TEP1Q99973 2627 aaKnown RBP11.92□□□□□ -0.5
GNE-201ENST00000377902 F8WEM9 126 aa11.89□□□□□ -0.51
GNE-201ENST00000377902 KLKP1Q107X0 134 aa11.89□□□□□ -0.51
GNE-201ENST00000377902 HECTD1Q9ULT8 2610 aa11.89□□□□□ -0.51
GNE-201ENST00000377902 KRTAP26-1Q6PEX3 210 aa11.88□□□□□ -0.51
GNE-201ENST00000377902 LINC00528Q8N1L1 170 aa11.87□□□□□ -0.51
GNE-201ENST00000377902 BCE1O60756 84 aa11.87□□□□□ -0.51
GNE-201ENST00000377902 C15orf56Q8N910 161 aa11.87□□□□□ -0.51
GNE-201ENST00000377902 RETNQ9HD89 108 aa11.87□□□□□ -0.51
GNE-201ENST00000377902 M0R378 163 aa11.86□□□□□ -0.51
GNE-201ENST00000377902 Q6ZRP5 223 aa11.86□□□□□ -0.51
GNE-201ENST00000377902 TRBV7-6A0A0J9YX20 115 aa11.85□□□□□ -0.51
GNE-201ENST00000377902 DEFB105AQ8NG35 78 aa11.85□□□□□ -0.51
GNE-201ENST00000377902 H3BQ85 93 aa11.85□□□□□ -0.51
GNE-201ENST00000377902 KPRPQ5T749 579 aaPredicted RBP11.84□□□□□ -0.51
GNE-201ENST00000377902 INAFM1C9JVW0 142 aa11.84□□□□□ -0.51
GNE-201ENST00000377902 C3orf84H3BNL1 204 aa11.84□□□□□ -0.51
GNE-201ENST00000377902 ANK2Q01484 3957 aa11.84□□□□□ -0.51
GNE-201ENST00000377902 BPY2O14599 106 aa11.83□□□□□ -0.52
GNE-201ENST00000377902 EGFEM1PQ0D2K5 195 aa11.83□□□□□ -0.52
GNE-201ENST00000377902 NSD1Q96L73 2696 aaPredicted RBP11.83□□□□□ -0.52
GNE-201ENST00000377902 SERP1Q9Y6X1 66 aa11.82□□□□□ -0.52
GNE-201ENST00000377902 NREPQ16612 68 aa11.82□□□□□ -0.52
GNE-201ENST00000377902 EPM2AB3EWF7 344 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms