RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 SND1-IT1Q9HBX3 110 aa7□□□□□ -1.29
SMARCE1-203ENST00000377808 COLCA2A8K830 154 aa6.99□□□□□ -1.29
SMARCE1-203ENST00000377808 BCE1O60756 84 aa6.99□□□□□ -1.29
SMARCE1-203ENST00000377808 ATP6V1G1O75348 118 aa6.99□□□□□ -1.29
SMARCE1-203ENST00000377808 COX17Q14061 63 aa6.99□□□□□ -1.29
SMARCE1-203ENST00000377808 MEIG1Q5JSS6 88 aa6.99□□□□□ -1.29
SMARCE1-203ENST00000377808 HSPB8Q9UJY1 196 aa6.99□□□□□ -1.29
SMARCE1-203ENST00000377808 IGLV5-37A0A075B6J1 123 aa6.98□□□□□ -1.29
SMARCE1-203ENST00000377808 RPL28P46779 137 aaKnown RBP6.98□□□□□ -1.29
SMARCE1-203ENST00000377808 UBE2AP49459 152 aa6.98□□□□□ -1.29
SMARCE1-203ENST00000377808 LINC00310P59036 64 aa6.98□□□□□ -1.29
SMARCE1-203ENST00000377808 RPL24P83731 157 aaKnown RBP6.98□□□□□ -1.29
SMARCE1-203ENST00000377808 SMIM13P0DJ93 91 aa6.96□□□□□ -1.3
SMARCE1-203ENST00000377808 VPREB1P12018 145 aa6.96□□□□□ -1.3
SMARCE1-203ENST00000377808 PMCHL2Q9BQD1 86 aa6.96□□□□□ -1.3
SMARCE1-203ENST00000377808 IGLV1-50A0A075B6I6 118 aa6.95□□□□□ -1.3
SMARCE1-203ENST00000377808 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
SMARCE1-203ENST00000377808 PLNP26678 52 aa6.95□□□□□ -1.3
SMARCE1-203ENST00000377808 NDUFA12Q9UI09 145 aa6.95□□□□□ -1.3
SMARCE1-203ENST00000377808 UBR4Q5T4S7 5183 aa6.94□□□□□ -1.3
SMARCE1-203ENST00000377808 MYMXA0A1B0GTQ4 84 aa6.94□□□□□ -1.3
SMARCE1-203ENST00000377808 HERVK_113P61574 105 aa6.94□□□□□ -1.3
SMARCE1-203ENST00000377808 FAM19A1Q7Z5A9 133 aa6.94□□□□□ -1.3
SMARCE1-203ENST00000377808 TMEM238C9JI98 176 aa6.93□□□□□ -1.3
SMARCE1-203ENST00000377808 DPM2O94777 84 aa6.93□□□□□ -1.3
SMARCE1-203ENST00000377808 RPL13AP40429 203 aaKnown RBP6.93□□□□□ -1.3
SMARCE1-203ENST00000377808 HERV-K104P63124 156 aa6.93□□□□□ -1.3
SMARCE1-203ENST00000377808 Q8NDZ9 215 aa6.93□□□□□ -1.3
SMARCE1-203ENST00000377808 MAP1LC3CQ9BXW4 147 aa6.93□□□□□ -1.3
SMARCE1-203ENST00000377808 NCR3O14931 201 aa6.92□□□□□ -1.3
SMARCE1-203ENST00000377808 LEPROTO15243 131 aa6.92□□□□□ -1.3
SMARCE1-203ENST00000377808 IGKCP01834 107 aa6.92□□□□□ -1.3
SMARCE1-203ENST00000377808 PRLHP81277 87 aa6.92□□□□□ -1.3
SMARCE1-203ENST00000377808 BOD1L2Q8IYS8 172 aa6.92□□□□□ -1.3
SMARCE1-203ENST00000377808 MIR7-3HGQ8N6C7 128 aa6.92□□□□□ -1.3
SMARCE1-203ENST00000377808 PLEKHB2Q96CS7 222 aa6.92□□□□□ -1.3
SMARCE1-203ENST00000377808 TMEM126AQ9H061 195 aa6.92□□□□□ -1.3
SMARCE1-203ENST00000377808 LINC00587B1AMM8 73 aa6.91□□□□□ -1.3
SMARCE1-203ENST00000377808 LGALS3P17931 250 aaKnown RBP6.91□□□□□ -1.3
SMARCE1-203ENST00000377808 TSPEAR-AS2P59090 65 aa6.91□□□□□ -1.3
SMARCE1-203ENST00000377808 LRP2P98164 4655 aa6.9□□□□□ -1.3
SMARCE1-203ENST00000377808 J3QQQ9 107 aa6.9□□□□□ -1.3
SMARCE1-203ENST00000377808 HIST1H2BKO60814 126 aa6.9□□□□□ -1.3
SMARCE1-203ENST00000377808 HIST1H2BJP06899 126 aa6.9□□□□□ -1.3
SMARCE1-203ENST00000377808 HIST1H2BOP23527 126 aa6.9□□□□□ -1.3
SMARCE1-203ENST00000377808 HIST1H2BBP33778 126 aa6.9□□□□□ -1.3
SMARCE1-203ENST00000377808 HIST1H2BDP58876 126 aa6.9□□□□□ -1.3
SMARCE1-203ENST00000377808 HIST1H2BCP62807 126 aa6.9□□□□□ -1.3
SMARCE1-203ENST00000377808 HIST2H2BEQ16778 126 aa6.9□□□□□ -1.3
SMARCE1-203ENST00000377808 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.9□□□□□ -1.3
SMARCE1-203ENST00000377808 HIST1H2BHQ93079 126 aa6.9□□□□□ -1.3
SMARCE1-203ENST00000377808 HIST1H2BNQ99877 126 aa6.9□□□□□ -1.3
SMARCE1-203ENST00000377808 HIST1H2BMQ99879 126 aa6.9□□□□□ -1.3
SMARCE1-203ENST00000377808 M0R378 163 aa6.89□□□□□ -1.31
SMARCE1-203ENST00000377808 DAND5Q8N907 189 aa6.89□□□□□ -1.31
SMARCE1-203ENST00000377808 ANAPC11Q9NYG5 84 aa6.89□□□□□ -1.31
SMARCE1-203ENST00000377808 CRYGAP11844 174 aa6.88□□□□□ -1.31
SMARCE1-203ENST00000377808 XP32Q5T750 250 aa6.88□□□□□ -1.31
SMARCE1-203ENST00000377808 KRTAP13-1Q8IUC0 172 aa6.88□□□□□ -1.31
SMARCE1-203ENST00000377808 A0A087X002 238 aa6.87□□□□□ -1.31
SMARCE1-203ENST00000377808 NMUP48645 174 aa6.87□□□□□ -1.31
SMARCE1-203ENST00000377808 TYMSOSQ8TAI1 123 aa6.87□□□□□ -1.31
SMARCE1-203ENST00000377808 HIGD2AQ9BW72 106 aa6.87□□□□□ -1.31
SMARCE1-203ENST00000377808 MIEN1Q9BRT3 115 aa6.86□□□□□ -1.31
SMARCE1-203ENST00000377808 SYS1-DBNDD2H3BUS1 97 aa6.85□□□□□ -1.31
SMARCE1-203ENST00000377808 TSPAN13O95857 204 aa6.85□□□□□ -1.31
SMARCE1-203ENST00000377808 NPC2P61916 151 aa6.85□□□□□ -1.31
SMARCE1-203ENST00000377808 S100A12P80511 92 aa6.85□□□□□ -1.31
SMARCE1-203ENST00000377808 IGKV2D-26A0A0A0MRZ7 120 aa6.84□□□□□ -1.31
SMARCE1-203ENST00000377808 PRYO14603 147 aa6.84□□□□□ -1.31
SMARCE1-203ENST00000377808 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
SMARCE1-203ENST00000377808 TRBV10-3A0A0K0K1G6 114 aa6.83□□□□□ -1.32
SMARCE1-203ENST00000377808 ETDCA0A1B0GVM5 59 aa6.83□□□□□ -1.32
SMARCE1-203ENST00000377808 E9PLD3 99 aa6.83□□□□□ -1.32
SMARCE1-203ENST00000377808 PRR4Q16378 134 aa6.83□□□□□ -1.32
SMARCE1-203ENST00000377808 KRTDAPP60985 99 aa6.82□□□□□ -1.32
SMARCE1-203ENST00000377808 PET117Q6UWS5 81 aa6.82□□□□□ -1.32
SMARCE1-203ENST00000377808 LPAP08519 4548 aa6.81□□□□□ -1.32
SMARCE1-203ENST00000377808 A0A0J9YXY3 114 aa6.81□□□□□ -1.32
SMARCE1-203ENST00000377808 DDTP30046 118 aa6.81□□□□□ -1.32
SMARCE1-203ENST00000377808 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
SMARCE1-203ENST00000377808 KRTAP13-2Q52LG2 175 aa6.81□□□□□ -1.32
SMARCE1-203ENST00000377808 S100A7L2Q5SY68 101 aa6.81□□□□□ -1.32
SMARCE1-203ENST00000377808 LINC01545Q5VT33 79 aa6.81□□□□□ -1.32
SMARCE1-203ENST00000377808 C3orf79P0CE67 100 aa6.8□□□□□ -1.32
SMARCE1-203ENST00000377808 KCNQ1DNQ9H478 68 aa6.8□□□□□ -1.32
SMARCE1-203ENST00000377808 SPANXB1Q9NS25 103 aaPredicted RBP6.8□□□□□ -1.32
SMARCE1-203ENST00000377808 LINC00337Q8N6G1 96 aa6.79□□□□□ -1.32
SMARCE1-203ENST00000377808 ZNF706Q9Y5V0 76 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1-203ENST00000377808 LOC107984156A0A0G2JMH3 177 aa6.78□□□□□ -1.32
SMARCE1-203ENST00000377808 TRBV10-2A0A0K0K1G8 114 aa6.78□□□□□ -1.32
SMARCE1-203ENST00000377808 C20orf202A1L168 122 aa6.78□□□□□ -1.32
SMARCE1-203ENST00000377808 ZNF815PA8K554 130 aa6.78□□□□□ -1.32
SMARCE1-203ENST00000377808 ADAMTSL4-AS1Q5T5F5 129 aa6.78□□□□□ -1.32
SMARCE1-203ENST00000377808 ARL17AQ8IVW1 177 aa6.78□□□□□ -1.32
SMARCE1-203ENST00000377808 LINC00304Q8N9R0 145 aa6.78□□□□□ -1.32
SMARCE1-203ENST00000377808 SPRR4Q96PI1 79 aa6.78□□□□□ -1.32
SMARCE1-203ENST00000377808 SPRR1AP35321 89 aa6.77□□□□□ -1.32
SMARCE1-203ENST00000377808 COA6Q5JTJ3 125 aaKnown RBP6.77□□□□□ -1.32
SMARCE1-203ENST00000377808 SOSTDC1Q6X4U4 206 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms