RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 FAM19A5Q7Z5A7 132 aaPredicted RBP9.65□□□□□ -0.86
CLCNKA-202ENST00000375692 TRAV23DV6A0A075B6W5 121 aa9.65□□□□□ -0.87
CLCNKA-202ENST00000375692 DEFB4AO15263 64 aa9.64□□□□□ -0.87
CLCNKA-202ENST00000375692 ENHOQ6UWT2 76 aa9.64□□□□□ -0.87
CLCNKA-202ENST00000375692 CHCHD10Q8WYQ3 142 aaPredicted RBP9.64□□□□□ -0.87
CLCNKA-202ENST00000375692 PRO0255Q9UI72 69 aa9.64□□□□□ -0.87
CLCNKA-202ENST00000375692 LINC00612Q8N6U2 182 aa9.63□□□□□ -0.87
CLCNKA-202ENST00000375692 ANGP03950 147 aaKnown RBP9.63□□□□□ -0.87
CLCNKA-202ENST00000375692 CD164L2Q6UWJ8 174 aa9.63□□□□□ -0.87
CLCNKA-202ENST00000375692 X6R8D5 127 aa9.63□□□□□ -0.87
CLCNKA-202ENST00000375692 NDUFC2O95298 119 aa9.62□□□□□ -0.87
CLCNKA-202ENST00000375692 C6orf223Q8N319 242 aa9.62□□□□□ -0.87
CLCNKA-202ENST00000375692 C10orf25Q5T742 122 aa9.61□□□□□ -0.87
CLCNKA-202ENST00000375692 DSCR8Q96T75 97 aa9.61□□□□□ -0.87
CLCNKA-202ENST00000375692 GHRHP01286 108 aa9.61□□□□□ -0.87
CLCNKA-202ENST00000375692 REG3AQ06141 175 aa9.61□□□□□ -0.87
CLCNKA-202ENST00000375692 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
CLCNKA-202ENST00000375692 DPH3Q96FX2 82 aa9.61□□□□□ -0.87
CLCNKA-202ENST00000375692 COX17Q14061 63 aa9.6□□□□□ -0.87
CLCNKA-202ENST00000375692 M0R2N4 97 aa9.6□□□□□ -0.87
CLCNKA-202ENST00000375692 UNQ6190/PRO20217Q6UXQ8 127 aa9.6□□□□□ -0.87
CLCNKA-202ENST00000375692 LINC00575Q6W349 94 aa9.59□□□□□ -0.87
CLCNKA-202ENST00000375692 TMEM258P61165 79 aa9.59□□□□□ -0.87
CLCNKA-202ENST00000375692 RPS28P62857 69 aaKnown RBP9.59□□□□□ -0.87
CLCNKA-202ENST00000375692 IGHV4-28A0A0C4DH34 117 aa9.58□□□□□ -0.88
CLCNKA-202ENST00000375692 OXTP01178 125 aa9.58□□□□□ -0.88
CLCNKA-202ENST00000375692 LYPD5Q6UWN5 251 aa9.58□□□□□ -0.88
CLCNKA-202ENST00000375692 UBL5Q9BZL1 73 aa9.58□□□□□ -0.88
CLCNKA-202ENST00000375692 LAMTOR3Q9UHA4 124 aa9.57□□□□□ -0.88
CLCNKA-202ENST00000375692 RBM3P98179 157 aaKnown RBP9.56□□□□□ -0.88
CLCNKA-202ENST00000375692 ATP5EP2Q5VTU8 51 aa9.56□□□□□ -0.88
CLCNKA-202ENST00000375692 Q6ZQT0 140 aa9.56□□□□□ -0.88
CLCNKA-202ENST00000375692 OXLD1Q5BKU9 147 aa9.55□□□□□ -0.88
CLCNKA-202ENST00000375692 SMIM9A6NGZ8 99 aa9.54□□□□□ -0.88
CLCNKA-202ENST00000375692 DEFB135Q30KP9 77 aa9.54□□□□□ -0.88
CLCNKA-202ENST00000375692 C9orf66Q5T8R8 295 aa9.54□□□□□ -0.88
CLCNKA-202ENST00000375692 NOTCH1P46531 2555 aa9.54□□□□□ -0.88
CLCNKA-202ENST00000375692 SPAG11BQ08648 103 aa9.54□□□□□ -0.88
CLCNKA-202ENST00000375692 C20orf197Q8N268 126 aa9.53□□□□□ -0.88
CLCNKA-202ENST00000375692 ZNF561-AS1K7EIQ3 104 aa9.53□□□□□ -0.88
CLCNKA-202ENST00000375692 Q6ZQY7 126 aa9.53□□□□□ -0.88
CLCNKA-202ENST00000375692 HAMPP81172 84 aa9.52□□□□□ -0.89
CLCNKA-202ENST00000375692 HTN3P15516 51 aa9.51□□□□□ -0.89
CLCNKA-202ENST00000375692 XAGE1AQ9HD64 81 aa9.51□□□□□ -0.89
CLCNKA-202ENST00000375692 TRBV10-3A0A0K0K1G6 114 aa9.5□□□□□ -0.89
CLCNKA-202ENST00000375692 LYRM9A8MSI8 78 aa9.5□□□□□ -0.89
CLCNKA-202ENST00000375692 IGLV6-57P01721 117 aa9.5□□□□□ -0.89
CLCNKA-202ENST00000375692 LINC01547P58512 204 aaPredicted RBP9.5□□□□□ -0.89
CLCNKA-202ENST00000375692 CELA1Q9UNI1 258 aa9.5□□□□□ -0.89
CLCNKA-202ENST00000375692 LOC110117498A0A087WWA1 95 aa9.5□□□□□ -0.89
CLCNKA-202ENST00000375692 DAD1P61803 113 aa9.5□□□□□ -0.89
CLCNKA-202ENST00000375692 KLK12Q9UKR0 248 aa9.5□□□□□ -0.89
CLCNKA-202ENST00000375692 Q6ZVQ6 151 aa9.49□□□□□ -0.89
CLCNKA-202ENST00000375692 MDFIQ99750 246 aa9.49□□□□□ -0.89
CLCNKA-202ENST00000375692 TRAV10A0A0B4J240 114 aa9.48□□□□□ -0.89
CLCNKA-202ENST00000375692 C5orf47Q569G3 176 aa9.48□□□□□ -0.89
CLCNKA-202ENST00000375692 NBEAL1Q6ZS30 2694 aa9.47□□□□□ -0.89
CLCNKA-202ENST00000375692 A0A0J9YWU9 116 aa9.47□□□□□ -0.89
CLCNKA-202ENST00000375692 IGHV4-30-4P0DP06 118 aa9.47□□□□□ -0.89
CLCNKA-202ENST00000375692 CMYA5Q8N3K9 4069 aa9.47□□□□□ -0.89
CLCNKA-202ENST00000375692 MGAM2Q2M2H8 2515 aa9.47□□□□□ -0.89
CLCNKA-202ENST00000375692 KRTAP10-11P60412 298 aa9.47□□□□□ -0.89
CLCNKA-202ENST00000375692 C4orf26Q17RF5 130 aa9.47□□□□□ -0.89
CLCNKA-202ENST00000375692 SCXQ7RTU7 201 aa9.46□□□□□ -0.9
CLCNKA-202ENST00000375692 C6orf48Q9UBA6 75 aa9.46□□□□□ -0.9
CLCNKA-202ENST00000375692 MUC7Q8TAX7 377 aa9.44□□□□□ -0.9
CLCNKA-202ENST00000375692 ANK2Q01484 3957 aa9.43□□□□□ -0.9
CLCNKA-202ENST00000375692 WIPF1O43516 503 aa9.43□□□□□ -0.9
CLCNKA-202ENST00000375692 TRAV7A0A075B6U4 112 aa9.43□□□□□ -0.9
CLCNKA-202ENST00000375692 LELP1Q5T871 98 aa9.43□□□□□ -0.9
CLCNKA-202ENST00000375692 Q5XG85 94 aa9.43□□□□□ -0.9
CLCNKA-202ENST00000375692 DIRC1Q969H9 104 aa9.43□□□□□ -0.9
CLCNKA-202ENST00000375692 SNURFQ9Y675 71 aa9.43□□□□□ -0.9
CLCNKA-202ENST00000375692 PRR34Q9NV39 138 aa9.42□□□□□ -0.9
CLCNKA-202ENST00000375692 ZNF73O43830 326 aaPredicted RBP9.42□□□□□ -0.9
CLCNKA-202ENST00000375692 NDUFC2-KCTD14E9PQ53 114 aa9.41□□□□□ -0.9
CLCNKA-202ENST00000375692 H7BZZ5 65 aa9.41□□□□□ -0.9
CLCNKA-202ENST00000375692 HIGD2BQ4VC39 106 aa9.41□□□□□ -0.9
CLCNKA-202ENST00000375692 Q8NAQ8 132 aa9.41□□□□□ -0.9
CLCNKA-202ENST00000375692 HRCT1Q6UXD1 115 aa9.41□□□□□ -0.9
CLCNKA-202ENST00000375692 FAM236DA0A1B0GTK5 79 aa9.4□□□□□ -0.9
CLCNKA-202ENST00000375692 PRB2P02812 416 aaPredicted RBP9.4□□□□□ -0.9
CLCNKA-202ENST00000375692 FAM236CP0DP71 79 aa9.4□□□□□ -0.9
CLCNKA-202ENST00000375692 COX7BP24311 80 aa9.4□□□□□ -0.9
CLCNKA-202ENST00000375692 RMI2Q96E14 147 aa9.4□□□□□ -0.9
CLCNKA-202ENST00000375692 GVQW2A0A096LPI5 108 aaPredicted RBP9.39□□□□□ -0.91
CLCNKA-202ENST00000375692 TRBV7-4A0A0J9YYF1 115 aa9.38□□□□□ -0.91
CLCNKA-202ENST00000375692 PDE6GP18545 87 aa9.38□□□□□ -0.91
CLCNKA-202ENST00000375692 CXCL6P80162 114 aa9.38□□□□□ -0.91
CLCNKA-202ENST00000375692 SPART-AS1P0CW21 52 aa9.38□□□□□ -0.91
CLCNKA-202ENST00000375692 APOC4P55056 127 aa9.38□□□□□ -0.91
CLCNKA-202ENST00000375692 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.37□□□□□ -0.91
CLCNKA-202ENST00000375692 TM2D3Q9BRN9 247 aa9.37□□□□□ -0.91
CLCNKA-202ENST00000375692 ELOF1P60002 83 aaKnown RBP9.37□□□□□ -0.91
CLCNKA-202ENST00000375692 EGFEM1PQ0D2K5 195 aa9.36□□□□□ -0.91
CLCNKA-202ENST00000375692 BCE1O60756 84 aa9.36□□□□□ -0.91
CLCNKA-202ENST00000375692 VPREB1P12018 145 aa9.36□□□□□ -0.91
CLCNKA-202ENST00000375692 CAMK2N2Q96S95 79 aa9.35□□□□□ -0.91
CLCNKA-202ENST00000375692 MIFP14174 115 aa9.35□□□□□ -0.91
CLCNKA-202ENST00000375692 KLKP1Q107X0 134 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms