RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 C15orf56Q8N910 161 aa4.44□□□□□ -1.7
UBR4-204ENST00000375254 USP9YO00507 2555 aaPredicted RBP4.44□□□□□ -1.7
UBR4-204ENST00000375254 COL11A2P13942 1736 aaPredicted RBP4.44□□□□□ -1.7
UBR4-204ENST00000375254 SHANK3Q9BYB0 1731 aa4.43□□□□□ -1.7
UBR4-204ENST00000375254 STRCQ7RTU9 1775 aa4.43□□□□□ -1.7
UBR4-204ENST00000375254 TET2Q6N021 2002 aaPredicted RBP4.43□□□□□ -1.7
UBR4-204ENST00000375254 THSD7AQ9UPZ6 1657 aa4.43□□□□□ -1.7
UBR4-204ENST00000375254 DSCAMO60469 2012 aa4.43□□□□□ -1.7
UBR4-204ENST00000375254 NLRC5Q86WI3 1866 aa4.42□□□□□ -1.7
UBR4-204ENST00000375254 COL4A3Q01955 1670 aa4.42□□□□□ -1.7
UBR4-204ENST00000375254 NRXN2Q9P2S2 1712 aa4.42□□□□□ -1.7
UBR4-204ENST00000375254 A0A1B0GU33 70 aa4.42□□□□□ -1.7
UBR4-204ENST00000375254 C9orf129Q5T035 196 aaKnown RBP4.42□□□□□ -1.7
UBR4-204ENST00000375254 MAPK1IP1LQ8NDC0 245 aa4.42□□□□□ -1.7
UBR4-204ENST00000375254 C9orf163Q8N9P6 203 aa4.41□□□□□ -1.7
UBR4-204ENST00000375254 ZFYVE26Q68DK2 2539 aa4.41□□□□□ -1.7
UBR4-204ENST00000375254 UBR3Q6ZT12 1888 aa4.41□□□□□ -1.7
UBR4-204ENST00000375254 CSAG1Q6PB30 78 aa4.41□□□□□ -1.7
UBR4-204ENST00000375254 APLNQ9ULZ1 77 aa4.41□□□□□ -1.7
UBR4-204ENST00000375254 TCF20Q9UGU0 1960 aaKnown RBP4.41□□□□□ -1.7
UBR4-204ENST00000375254 SPRR4Q96PI1 79 aa4.41□□□□□ -1.7
UBR4-204ENST00000375254 IGLV1-50A0A075B6I6 118 aa4.41□□□□□ -1.7
UBR4-204ENST00000375254 EML5Q05BV3 1969 aa4.41□□□□□ -1.7
UBR4-204ENST00000375254 ADORA2A-AS1P86434 159 aa4.4□□□□□ -1.7
UBR4-204ENST00000375254 TLN1Q9Y490 2541 aaKnown RBP4.4□□□□□ -1.7
UBR4-204ENST00000375254 C16orf95Q9H693 158 aa4.4□□□□□ -1.7
UBR4-204ENST00000375254 OBSL1O75147 1896 aa4.4□□□□□ -1.71
UBR4-204ENST00000375254 IGFL1Q6UW32 110 aa4.4□□□□□ -1.71
UBR4-204ENST00000375254 GREB1LQ9C091 1923 aaPredicted RBP4.4□□□□□ -1.71
UBR4-204ENST00000375254 Q8NA96 180 aa4.4□□□□□ -1.71
UBR4-204ENST00000375254 PLXNA4Q9HCM2 1894 aa4.4□□□□□ -1.71
UBR4-204ENST00000375254 ECM29Q5VYK3 1845 aa4.4□□□□□ -1.71
UBR4-204ENST00000375254 ST20-AS1Q8NBB2 130 aa4.39□□□□□ -1.71
UBR4-204ENST00000375254 DOCK5Q9H7D0 1870 aa4.38□□□□□ -1.71
UBR4-204ENST00000375254 COL5A3P25940 1745 aaPredicted RBP4.38□□□□□ -1.71
UBR4-204ENST00000375254 MYO16Q9Y6X6 1858 aa4.38□□□□□ -1.71
UBR4-204ENST00000375254 TLX1NBP0CAT3 122 aa4.37□□□□□ -1.71
UBR4-204ENST00000375254 ABCA12Q86UK0 2595 aa4.37□□□□□ -1.71
UBR4-204ENST00000375254 VWA8A3KMH1 1905 aa4.37□□□□□ -1.71
UBR4-204ENST00000375254 PRR34Q9NV39 138 aa4.37□□□□□ -1.71
UBR4-204ENST00000375254 NUPR2A6NF83 97 aa4.37□□□□□ -1.71
UBR4-204ENST00000375254 IGLV7-43P04211 117 aa4.36□□□□□ -1.71
UBR4-204ENST00000375254 RLFQ13129 1914 aa4.36□□□□□ -1.71
UBR4-204ENST00000375254 FAM229BQ4G0N7 80 aa4.36□□□□□ -1.71
UBR4-204ENST00000375254 DENND4CQ5VZ89 1909 aa4.36□□□□□ -1.71
UBR4-204ENST00000375254 JMJD1CQ15652 2540 aa4.36□□□□□ -1.71
UBR4-204ENST00000375254 BRWD3Q6RI45 1802 aa4.36□□□□□ -1.71
UBR4-204ENST00000375254 ATG2AQ2TAZ0 1938 aa4.36□□□□□ -1.71
UBR4-204ENST00000375254 OXTP01178 125 aa4.35□□□□□ -1.71
UBR4-204ENST00000375254 BTAF1O14981 1849 aa4.35□□□□□ -1.71
UBR4-204ENST00000375254 IGLV5-52A0A0A0MRZ9 124 aa4.35□□□□□ -1.71
UBR4-204ENST00000375254 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
UBR4-204ENST00000375254 SIPA1L1O43166 1804 aa4.35□□□□□ -1.71
UBR4-204ENST00000375254 C10orf142B7Z368 130 aa4.35□□□□□ -1.71
UBR4-204ENST00000375254 SPATA8Q6RVD6 105 aa4.35□□□□□ -1.71
UBR4-204ENST00000375254 DMBT1Q9UGM3 2413 aaPredicted RBP4.35□□□□□ -1.71
UBR4-204ENST00000375254 CYSTM1Q9H1C7 97 aa4.34□□□□□ -1.71
UBR4-204ENST00000375254 DSCR10P59022 87 aa4.34□□□□□ -1.71
UBR4-204ENST00000375254 PTPRBP23467 1997 aa4.34□□□□□ -1.71
UBR4-204ENST00000375254 PRR26Q8N8Z3 221 aa4.34□□□□□ -1.71
UBR4-204ENST00000375254 A0A1W2PNM2 257 aa4.34□□□□□ -1.71
UBR4-204ENST00000375254 TANC1Q9C0D5 1861 aa4.34□□□□□ -1.71
UBR4-204ENST00000375254 ROMO1P60602 79 aa4.34□□□□□ -1.72
UBR4-204ENST00000375254 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.34□□□□□ -1.72
UBR4-204ENST00000375254 CSNK1G2-AS1Q8NCQ2 148 aa4.34□□□□□ -1.72
UBR4-204ENST00000375254 EXPH5Q8NEV8 1989 aa4.33□□□□□ -1.72
UBR4-204ENST00000375254 ADAMTSL1Q8N6G6 1762 aa4.33□□□□□ -1.72
UBR4-204ENST00000375254 A6NN06 94 aa4.33□□□□□ -1.72
UBR4-204ENST00000375254 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
UBR4-204ENST00000375254 RALGAPA2Q2PPJ7 1873 aa4.33□□□□□ -1.72
UBR4-204ENST00000375254 ADAMTS9Q9P2N4 1935 aa4.33□□□□□ -1.72
UBR4-204ENST00000375254 TSC2P49815 1807 aa4.32□□□□□ -1.72
UBR4-204ENST00000375254 LINC00483Q53H64 154 aa4.32□□□□□ -1.72
UBR4-204ENST00000375254 SETD2Q9BYW2 2564 aaPredicted RBP4.32□□□□□ -1.72
UBR4-204ENST00000375254 LCTP09848 1927 aa4.32□□□□□ -1.72
UBR4-204ENST00000375254 DNAH10OSP0CZ25 163 aa4.32□□□□□ -1.72
UBR4-204ENST00000375254 Q96NJ1 140 aa4.31□□□□□ -1.72
UBR4-204ENST00000375254 IGLV5-37A0A075B6J1 123 aa4.31□□□□□ -1.72
UBR4-204ENST00000375254 A0A0G2JMZ2 1700 aa4.31□□□□□ -1.72
UBR4-204ENST00000375254 LRRC37A2A6NM11 1700 aa4.31□□□□□ -1.72
UBR4-204ENST00000375254 PLXNB2O15031 1838 aa4.31□□□□□ -1.72
UBR4-204ENST00000375254 J3QKU1 62 aa4.3□□□□□ -1.72
UBR4-204ENST00000375254 ZNF106Q9H2Y7 1883 aaKnown RBP4.3□□□□□ -1.72
UBR4-204ENST00000375254 CNBPP62633 177 aaKnown RBP4.3□□□□□ -1.72
UBR4-204ENST00000375254 C2orf16Q68DN1 1984 aa4.3□□□□□ -1.72
UBR4-204ENST00000375254 C10orf99Q6UWK7 81 aa4.3□□□□□ -1.72
UBR4-204ENST00000375254 LTBP1Q14766 1721 aa4.3□□□□□ -1.72
UBR4-204ENST00000375254 PIEZO1Q92508 2521 aa4.3□□□□□ -1.72
UBR4-204ENST00000375254 INAFM1C9JVW0 142 aa4.3□□□□□ -1.72
UBR4-204ENST00000375254 SPINK7P58062 85 aa4.3□□□□□ -1.72
UBR4-204ENST00000375254 LY6G6CO95867 125 aa4.3□□□□□ -1.72
UBR4-204ENST00000375254 C18orf65Q6ZTR6 163 aa4.3□□□□□ -1.72
UBR4-204ENST00000375254 SBF2Q86WG5 1849 aa4.29□□□□□ -1.72
UBR4-204ENST00000375254 COL4A4P53420 1690 aaPredicted RBP4.29□□□□□ -1.72
UBR4-204ENST00000375254 ZNF861PO60384 105 aa4.29□□□□□ -1.72
UBR4-204ENST00000375254 A0A1W2PNU3 283 aaPredicted RBP4.29□□□□□ -1.72
UBR4-204ENST00000375254 PLXNA1Q9UIW2 1896 aa4.29□□□□□ -1.72
UBR4-204ENST00000375254 ZFHX2Q9C0A1 2572 aaPredicted RBP4.29□□□□□ -1.72
UBR4-204ENST00000375254 PLXNA3P51805 1871 aa4.29□□□□□ -1.72
UBR4-204ENST00000375254 BRCA1P38398 1863 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms