RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 ATP11AUNQ6ZP68 121 aa10.19□□□□□ -0.78
NOTCH4-201ENST00000375023 Q96NJ1 140 aa10.19□□□□□ -0.78
NOTCH4-201ENST00000375023 LRRK2Q5S007 2527 aa10.19□□□□□ -0.78
NOTCH4-201ENST00000375023 TMEM254Q8TBM7 123 aa10.19□□□□□ -0.78
NOTCH4-201ENST00000375023 hDV103S1A0JD37 113 aa10.18□□□□□ -0.78
NOTCH4-201ENST00000375023 C6orf48Q9UBA6 75 aa10.18□□□□□ -0.78
NOTCH4-201ENST00000375023 Q8N2B8 174 aa10.17□□□□□ -0.78
NOTCH4-201ENST00000375023 C11orf72Q8NBR9 251 aa10.17□□□□□ -0.78
NOTCH4-201ENST00000375023 SPATA3Q8NHX4 192 aa10.16□□□□□ -0.78
NOTCH4-201ENST00000375023 COL27A1Q8IZC6 1860 aaPredicted RBP10.15□□□□□ -0.78
NOTCH4-201ENST00000375023 ST20-AS1Q8NBB2 130 aa10.15□□□□□ -0.78
NOTCH4-201ENST00000375023 SPAG11AQ6PDA7 123 aa10.14□□□□□ -0.79
NOTCH4-201ENST00000375023 ZFYVE26Q68DK2 2539 aa10.14□□□□□ -0.79
NOTCH4-201ENST00000375023 FN1P02751 2386 aaKnown RBP10.13□□□□□ -0.79
NOTCH4-201ENST00000375023 FAM218AQ96MZ4 157 aa10.12□□□□□ -0.79
NOTCH4-201ENST00000375023 NBDYA0A0U1RRE5 68 aa10.12□□□□□ -0.79
NOTCH4-201ENST00000375023 A0A1B0GU69 56 aa10.11□□□□□ -0.79
NOTCH4-201ENST00000375023 TLN1Q9Y490 2541 aaKnown RBP10.11□□□□□ -0.79
NOTCH4-201ENST00000375023 FAM168BA1KXE4 195 aa10.1□□□□□ -0.79
NOTCH4-201ENST00000375023 KIF25-AS1Q9Y6Z4 181 aa10.1□□□□□ -0.79
NOTCH4-201ENST00000375023 MYO9AB2RTY4 2548 aa10.09□□□□□ -0.79
NOTCH4-201ENST00000375023 LINC01554Q52M75 96 aa10.09□□□□□ -0.79
NOTCH4-201ENST00000375023 ABCA12Q86UK0 2595 aa10.08□□□□□ -0.8
NOTCH4-201ENST00000375023 DNAH10OSP0CZ25 163 aa10.08□□□□□ -0.8
NOTCH4-201ENST00000375023 EPM2AB3EWF7 344 aa10.07□□□□□ -0.8
NOTCH4-201ENST00000375023 IGHV3OR16-9A0A0B4J2B5 98 aa10.07□□□□□ -0.8
NOTCH4-201ENST00000375023 TLN2Q9Y4G6 2542 aa10.06□□□□□ -0.8
NOTCH4-201ENST00000375023 Q6ZRP5 223 aa10.06□□□□□ -0.8
NOTCH4-201ENST00000375023 LINC00476Q8WZB0 136 aa10.06□□□□□ -0.8
NOTCH4-201ENST00000375023 COX8CQ7Z4L0 72 aa10.06□□□□□ -0.8
NOTCH4-201ENST00000375023 ACYP2P14621 99 aa10.05□□□□□ -0.8
NOTCH4-201ENST00000375023 F8WDY8 70 aa10.05□□□□□ -0.8
NOTCH4-201ENST00000375023 LINC00313P59037 77 aa10.05□□□□□ -0.8
NOTCH4-201ENST00000375023 LINC00588Q9Y4M8 146 aa10.04□□□□□ -0.8
NOTCH4-201ENST00000375023 UTRNP46939 3433 aa10.02□□□□□ -0.81
NOTCH4-201ENST00000375023 CXCL6P80162 114 aa10.02□□□□□ -0.81
NOTCH4-201ENST00000375023 IGLV5-39A0A0G2JS06 123 aa10.02□□□□□ -0.81
NOTCH4-201ENST00000375023 SPINT4Q6UDR6 99 aa10.02□□□□□ -0.81
NOTCH4-201ENST00000375023 C10orf142B7Z368 130 aa10.01□□□□□ -0.81
NOTCH4-201ENST00000375023 C4orf26Q17RF5 130 aa10.01□□□□□ -0.81
NOTCH4-201ENST00000375023 LINC01561Q8N1V8 128 aa10.01□□□□□ -0.81
NOTCH4-201ENST00000375023 TM2D3Q9BRN9 247 aa10□□□□□ -0.81
NOTCH4-201ENST00000375023 SETD2Q9BYW2 2564 aaPredicted RBP10□□□□□ -0.81
NOTCH4-201ENST00000375023 ELOF1P60002 83 aaKnown RBP9.98□□□□□ -0.81
NOTCH4-201ENST00000375023 SMCPP49901 116 aaPredicted RBP9.98□□□□□ -0.81
NOTCH4-201ENST00000375023 FAM19A4Q96LR4 140 aa9.97□□□□□ -0.81
NOTCH4-201ENST00000375023 APLNQ9ULZ1 77 aa9.96□□□□□ -0.81
NOTCH4-201ENST00000375023 A0A0G2JQZ4 141 aa9.96□□□□□ -0.82
NOTCH4-201ENST00000375023 A0A1W2PNN7 141 aa9.96□□□□□ -0.82
NOTCH4-201ENST00000375023 Q6ZRX8 168 aa9.96□□□□□ -0.82
NOTCH4-201ENST00000375023 KRTAP10-11P60412 298 aa9.95□□□□□ -0.82
NOTCH4-201ENST00000375023 K7EIL1 84 aa9.95□□□□□ -0.82
NOTCH4-201ENST00000375023 ZNF462Q96JM2 2506 aa9.94□□□□□ -0.82
NOTCH4-201ENST00000375023 Q8NAQ8 132 aa9.94□□□□□ -0.82
NOTCH4-201ENST00000375023 Q6ZQT0 140 aa9.94□□□□□ -0.82
NOTCH4-201ENST00000375023 Q8NBF4 154 aa9.93□□□□□ -0.82
NOTCH4-201ENST00000375023 COL4A2P08572 1712 aa9.93□□□□□ -0.82
NOTCH4-201ENST00000375023 PIEZO1Q92508 2521 aa9.92□□□□□ -0.82
NOTCH4-201ENST00000375023 ANAPC11Q9NYG5 84 aa9.91□□□□□ -0.82
NOTCH4-201ENST00000375023 IGLV5-37A0A075B6J1 123 aa9.9□□□□□ -0.82
NOTCH4-201ENST00000375023 IGLV6-57P01721 117 aa9.9□□□□□ -0.82
NOTCH4-201ENST00000375023 DSCR10P59022 87 aa9.89□□□□□ -0.83
NOTCH4-201ENST00000375023 TP53AIP1Q9HCN2 124 aa9.88□□□□□ -0.83
NOTCH4-201ENST00000375023 OBSCN-AS1Q96MR7 158 aa9.88□□□□□ -0.83
NOTCH4-201ENST00000375023 LINC01546A6NGU7 62 aa9.88□□□□□ -0.83
NOTCH4-201ENST00000375023 LINC00304Q8N9R0 145 aa9.88□□□□□ -0.83
NOTCH4-201ENST00000375023 BCE1O60756 84 aa9.87□□□□□ -0.83
NOTCH4-201ENST00000375023 K7EQZ3 153 aa9.87□□□□□ -0.83
NOTCH4-201ENST00000375023 USP9XQ93008 2570 aaPredicted RBP9.87□□□□□ -0.83
NOTCH4-201ENST00000375023 SSBP3-AS1Q7Z2R9 100 aa9.87□□□□□ -0.83
NOTCH4-201ENST00000375023 TRAV22A0A0B4J277 110 aa9.86□□□□□ -0.83
NOTCH4-201ENST00000375023 DNAH12Q6ZR08 3092 aa9.85□□□□□ -0.83
NOTCH4-201ENST00000375023 TRBV7-4A0A0J9YYF1 115 aa9.85□□□□□ -0.83
NOTCH4-201ENST00000375023 LINC00528Q8N1L1 170 aa9.84□□□□□ -0.83
NOTCH4-201ENST00000375023 IGLV5-45A0A087WSX0 123 aa9.83□□□□□ -0.84
NOTCH4-201ENST00000375023 PCSK5Q92824 1860 aa9.82□□□□□ -0.84
NOTCH4-201ENST00000375023 ANKRD11Q6UB99 2663 aaPredicted RBP9.81□□□□□ -0.84
NOTCH4-201ENST00000375023 GVQW2A0A096LPI5 108 aaPredicted RBP9.81□□□□□ -0.84
NOTCH4-201ENST00000375023 PKD1L2Q7Z442 2459 aa9.8□□□□□ -0.84
NOTCH4-201ENST00000375023 H3BNG1 76 aa9.8□□□□□ -0.84
NOTCH4-201ENST00000375023 RBM12B-AS1Q9P1G2 102 aa9.79□□□□□ -0.84
NOTCH4-201ENST00000375023 PRO0461Q9UI25 63 aa9.78□□□□□ -0.84
NOTCH4-201ENST00000375023 VPREB1P12018 145 aa9.78□□□□□ -0.84
NOTCH4-201ENST00000375023 LINC01600Q96MT4 127 aa9.78□□□□□ -0.84
NOTCH4-201ENST00000375023 ANKRD17O75179 2603 aaKnown RBP9.78□□□□□ -0.84
NOTCH4-201ENST00000375023 ZNF575Q86XF7 245 aa9.77□□□□□ -0.84
NOTCH4-201ENST00000375023 SPTBN4Q9H254 2564 aa9.77□□□□□ -0.85
NOTCH4-201ENST00000375023 LOC110117498A0A087WWA1 95 aa9.77□□□□□ -0.85
NOTCH4-201ENST00000375023 C15orf56Q8N910 161 aa9.77□□□□□ -0.85
NOTCH4-201ENST00000375023 CSNK1G2-AS1Q8NCQ2 148 aa9.76□□□□□ -0.85
NOTCH4-201ENST00000375023 A0A0D9SG42 100 aa9.76□□□□□ -0.85
NOTCH4-201ENST00000375023 EIF4EBP3O60516 100 aaPredicted RBP9.75□□□□□ -0.85
NOTCH4-201ENST00000375023 A8MWP4 228 aa9.75□□□□□ -0.85
NOTCH4-201ENST00000375023 KRTAP10-3P60369 221 aa9.74□□□□□ -0.85
NOTCH4-201ENST00000375023 MRPL34Q9BQ48 92 aaKnown RBP9.74□□□□□ -0.85
NOTCH4-201ENST00000375023 POLQO75417 2590 aa9.74□□□□□ -0.85
NOTCH4-201ENST00000375023 COA5Q86WW8 74 aa9.74□□□□□ -0.85
NOTCH4-201ENST00000375023 PRO0628Q9UI54 55 aa9.74□□□□□ -0.85
NOTCH4-201ENST00000375023 IGLV1-50A0A075B6I6 118 aa9.73□□□□□ -0.85
NOTCH4-201ENST00000375023 A8MUN3 132 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms