RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 LY6G6CO95867 125 aa10.19□□□□□ -0.78
NIPAL3-204ENST00000374399 Q6ZRP5 223 aa10.19□□□□□ -0.78
NIPAL3-204ENST00000374399 FRAS1Q86XX4 4008 aa10.19□□□□□ -0.78
NIPAL3-204ENST00000374399 PRR3P79522 188 aaKnown RBP10.19□□□□□ -0.78
NIPAL3-204ENST00000374399 RNF151Q2KHN1 245 aa10.19□□□□□ -0.78
NIPAL3-204ENST00000374399 XAGE1AQ9HD64 81 aa10.18□□□□□ -0.78
NIPAL3-204ENST00000374399 H7C2G1 150 aa10.17□□□□□ -0.78
NIPAL3-204ENST00000374399 NDUFC2O95298 119 aa10.17□□□□□ -0.78
NIPAL3-204ENST00000374399 RPL13AP40429 203 aaKnown RBP10.17□□□□□ -0.78
NIPAL3-204ENST00000374399 TLX1NBP0CAT3 122 aa10.16□□□□□ -0.78
NIPAL3-204ENST00000374399 VAMP3Q15836 100 aa10.16□□□□□ -0.78
NIPAL3-204ENST00000374399 HECTD4Q9Y4D8 3996 aa10.16□□□□□ -0.78
NIPAL3-204ENST00000374399 CNBPP62633 177 aaKnown RBP10.16□□□□□ -0.78
NIPAL3-204ENST00000374399 C9orf129Q5T035 196 aaKnown RBP10.14□□□□□ -0.79
NIPAL3-204ENST00000374399 DNAH11Q96DT5 4516 aa10.14□□□□□ -0.79
NIPAL3-204ENST00000374399 FABP2P12104 132 aa10.13□□□□□ -0.79
NIPAL3-204ENST00000374399 GAGE2EQ4V326 116 aa10.13□□□□□ -0.79
NIPAL3-204ENST00000374399 GAGE2DQ9UEU5 116 aa10.13□□□□□ -0.79
NIPAL3-204ENST00000374399 TRAV13-2A0A0B4J235 113 aa10.13□□□□□ -0.79
NIPAL3-204ENST00000374399 K7EP34 96 aa10.13□□□□□ -0.79
NIPAL3-204ENST00000374399 TRIAP1O43715 76 aa10.13□□□□□ -0.79
NIPAL3-204ENST00000374399 SPCS1Q9Y6A9 102 aa10.12□□□□□ -0.79
NIPAL3-204ENST00000374399 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
NIPAL3-204ENST00000374399 VPREB1P12018 145 aa10.11□□□□□ -0.79
NIPAL3-204ENST00000374399 UBE2V1Q13404 147 aa10.11□□□□□ -0.79
NIPAL3-204ENST00000374399 Q1RN00 199 aa10.11□□□□□ -0.79
NIPAL3-204ENST00000374399 C14orf177Q52M58 125 aa10.11□□□□□ -0.79
NIPAL3-204ENST00000374399 A0A087WTM6 91 aa10.1□□□□□ -0.79
NIPAL3-204ENST00000374399 NCR3O14931 201 aa10.1□□□□□ -0.79
NIPAL3-204ENST00000374399 FAT2Q9NYQ8 4349 aa10.1□□□□□ -0.79
NIPAL3-204ENST00000374399 RPL18AQ02543 176 aaKnown RBP10.1□□□□□ -0.79
NIPAL3-204ENST00000374399 GAGE10A6NGK3 116 aa10.09□□□□□ -0.79
NIPAL3-204ENST00000374399 C1orf134Q5TEV5 83 aa10.09□□□□□ -0.79
NIPAL3-204ENST00000374399 Q8N814 137 aa10.09□□□□□ -0.79
NIPAL3-204ENST00000374399 PSMB2P49721 201 aa10.08□□□□□ -0.8
NIPAL3-204ENST00000374399 KRTAP7-1Q8IUC3 87 aa10.08□□□□□ -0.8
NIPAL3-204ENST00000374399 SMIM11BQ8TCY0 68 aa10.08□□□□□ -0.8
NIPAL3-204ENST00000374399 LOC107984640A0A0U1RRK4 108 aa10.07□□□□□ -0.8
NIPAL3-204ENST00000374399 TCL1BO95988 128 aa10.07□□□□□ -0.8
NIPAL3-204ENST00000374399 RPL28P46779 137 aaKnown RBP10.07□□□□□ -0.8
NIPAL3-204ENST00000374399 SERTAD4-AS1Q5TG53 156 aa10.07□□□□□ -0.8
NIPAL3-204ENST00000374399 TRBV10-2A0A0K0K1G8 114 aa10.07□□□□□ -0.8
NIPAL3-204ENST00000374399 FAM168BA1KXE4 195 aa10.06□□□□□ -0.8
NIPAL3-204ENST00000374399 C9orf163Q8N9P6 203 aa10.06□□□□□ -0.8
NIPAL3-204ENST00000374399 OR13C6PQ8NH95 151 aa10.06□□□□□ -0.8
NIPAL3-204ENST00000374399 DNAH5Q8TE73 4624 aa10.06□□□□□ -0.8
NIPAL3-204ENST00000374399 IGLV6-57P01721 117 aa10.05□□□□□ -0.8
NIPAL3-204ENST00000374399 GAGE2BQ13066 116 aa10.05□□□□□ -0.8
NIPAL3-204ENST00000374399 GTF2H5Q6ZYL4 71 aa10.05□□□□□ -0.8
NIPAL3-204ENST00000374399 A0A096LNI7 61 aa10.04□□□□□ -0.8
NIPAL3-204ENST00000374399 H3BMG7 143 aa10.04□□□□□ -0.8
NIPAL3-204ENST00000374399 SCGB1C2P0DMR2 95 aa10.04□□□□□ -0.8
NIPAL3-204ENST00000374399 PLA2G2DQ9UNK4 145 aa10.04□□□□□ -0.8
NIPAL3-204ENST00000374399 LINC01620Q4KN68 170 aa10.04□□□□□ -0.8
NIPAL3-204ENST00000374399 TMEM126AQ9H061 195 aa10.04□□□□□ -0.8
NIPAL3-204ENST00000374399 RTL8CO15255 209 aa10.03□□□□□ -0.8
NIPAL3-204ENST00000374399 CLEC2BQ92478 149 aa10.03□□□□□ -0.8
NIPAL3-204ENST00000374399 PKD1P98161 4303 aa10.02□□□□□ -0.8
NIPAL3-204ENST00000374399 TRBV10-3A0A0K0K1G6 114 aa10.02□□□□□ -0.8
NIPAL3-204ENST00000374399 C16orf90A8MZG2 172 aa10.02□□□□□ -0.8
NIPAL3-204ENST00000374399 FUSP35637 526 aaKnown RBP eCLIP10.02□□□□□ -0.8
NIPAL3-204ENST00000374399 RYR2Q92736 4967 aa10.02□□□□□ -0.81
NIPAL3-204ENST00000374399 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
NIPAL3-204ENST00000374399 TNP2Q05952 138 aa10.02□□□□□ -0.81
NIPAL3-204ENST00000374399 LYRM7Q5U5X0 104 aa10.02□□□□□ -0.81
NIPAL3-204ENST00000374399 SDIM1Q6ZPB5 146 aa10.02□□□□□ -0.81
NIPAL3-204ENST00000374399 TRBV20-1A0A075B6N2 111 aa10.01□□□□□ -0.81
NIPAL3-204ENST00000374399 M0R378 163 aa10.01□□□□□ -0.81
NIPAL3-204ENST00000374399 FAM218AQ96MZ4 157 aa10.01□□□□□ -0.81
NIPAL3-204ENST00000374399 PRO0461Q9UI25 63 aa10.01□□□□□ -0.81
NIPAL3-204ENST00000374399 S100A7L2Q5SY68 101 aa10□□□□□ -0.81
NIPAL3-204ENST00000374399 KMT2CQ8NEZ4 4911 aaKnown RBP9.99□□□□□ -0.81
NIPAL3-204ENST00000374399 COX6CP09669 75 aa9.99□□□□□ -0.81
NIPAL3-204ENST00000374399 CHTF8P0CG12 524 aa9.99□□□□□ -0.81
NIPAL3-204ENST00000374399 LST1O00453 97 aa9.99□□□□□ -0.81
NIPAL3-204ENST00000374399 C7orf33Q8WU49 177 aa9.99□□□□□ -0.81
NIPAL3-204ENST00000374399 IGKV2-24A0A0C4DH68 120 aa9.98□□□□□ -0.81
NIPAL3-204ENST00000374399 A0A1W2PNN7 141 aa9.98□□□□□ -0.81
NIPAL3-204ENST00000374399 PANO1I0J062 215 aa9.98□□□□□ -0.81
NIPAL3-204ENST00000374399 MTURNQ8N3F0 131 aa9.98□□□□□ -0.81
NIPAL3-204ENST00000374399 DNAH8Q96JB1 4490 aa9.97□□□□□ -0.81
NIPAL3-204ENST00000374399 SMCPP49901 116 aaPredicted RBP9.97□□□□□ -0.81
NIPAL3-204ENST00000374399 LCE6AA0A183 80 aa9.96□□□□□ -0.81
NIPAL3-204ENST00000374399 ATXN8Q156A1 80 aa9.96□□□□□ -0.81
NIPAL3-204ENST00000374399 C6orf99Q4VX62 202 aa9.96□□□□□ -0.81
NIPAL3-204ENST00000374399 C22orf24Q9Y442 160 aa9.96□□□□□ -0.81
NIPAL3-204ENST00000374399 FAM19A5Q7Z5A7 132 aaPredicted RBP9.96□□□□□ -0.82
NIPAL3-204ENST00000374399 TRAV23DV6A0A075B6W5 121 aa9.95□□□□□ -0.82
NIPAL3-204ENST00000374399 NKAPP1Q8N9T2 125 aa9.95□□□□□ -0.82
NIPAL3-204ENST00000374399 A0A087WYN8 130 aa9.94□□□□□ -0.82
NIPAL3-204ENST00000374399 H0YGX0 51 aa9.93□□□□□ -0.82
NIPAL3-204ENST00000374399 LINC00167Q96N53 147 aa9.93□□□□□ -0.82
NIPAL3-204ENST00000374399 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.93□□□□□ -0.82
NIPAL3-204ENST00000374399 IGLV1-50A0A075B6I6 118 aa9.92□□□□□ -0.82
NIPAL3-204ENST00000374399 F8W1H4 67 aa9.92□□□□□ -0.82
NIPAL3-204ENST00000374399 ZNF73O43830 326 aaPredicted RBP9.92□□□□□ -0.82
NIPAL3-204ENST00000374399 KRTAP10-2P60368 255 aa9.92□□□□□ -0.82
NIPAL3-204ENST00000374399 MRPL55Q7Z7F7 128 aaKnown RBP9.92□□□□□ -0.82
NIPAL3-204ENST00000374399 KCNQ1DNQ9H478 68 aa9.92□□□□□ -0.82
NIPAL3-204ENST00000374399 C9JAW5 83 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms