RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 LYSTQ99698 3801 aa6.34□□□□□ -1.39
PTPN20-202ENST00000374339 LOC107984156A0A0G2JMH3 177 aa6.33□□□□□ -1.4
PTPN20-202ENST00000374339 A0A1B0GWB2 263 aa6.33□□□□□ -1.4
PTPN20-202ENST00000374339 ARL17AQ8IVW1 177 aa6.33□□□□□ -1.4
PTPN20-202ENST00000374339 SND1-IT1Q9HBX3 110 aa6.33□□□□□ -1.4
PTPN20-202ENST00000374339 STARD9Q9P2P6 4700 aa6.33□□□□□ -1.4
PTPN20-202ENST00000374339 TLX1NBP0CAT3 122 aa6.32□□□□□ -1.4
PTPN20-202ENST00000374339 WFDC2Q14508 124 aa6.32□□□□□ -1.4
PTPN20-202ENST00000374339 A0A0B4J2C4 111 aa6.31□□□□□ -1.4
PTPN20-202ENST00000374339 LCE6AA0A183 80 aa6.31□□□□□ -1.4
PTPN20-202ENST00000374339 SLPIP03973 132 aa6.31□□□□□ -1.4
PTPN20-202ENST00000374339 SOSTDC1Q6X4U4 206 aa6.31□□□□□ -1.4
PTPN20-202ENST00000374339 Q8N814 137 aa6.31□□□□□ -1.4
PTPN20-202ENST00000374339 RAB37Q96AX2 223 aa6.31□□□□□ -1.4
PTPN20-202ENST00000374339 A0A087WTM6 91 aa6.31□□□□□ -1.4
PTPN20-202ENST00000374339 LOC107984640A0A0U1RRK4 108 aa6.31□□□□□ -1.4
PTPN20-202ENST00000374339 NDUFC2O95298 119 aa6.31□□□□□ -1.4
PTPN20-202ENST00000374339 CFC1BP0CG36 223 aa6.31□□□□□ -1.4
PTPN20-202ENST00000374339 CFC1P0CG37 223 aa6.31□□□□□ -1.4
PTPN20-202ENST00000374339 PRO1854Q9UHT4 67 aa6.31□□□□□ -1.4
PTPN20-202ENST00000374339 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.3□□□□□ -1.4
PTPN20-202ENST00000374339 RPL18AQ02543 176 aaKnown RBP6.3□□□□□ -1.4
PTPN20-202ENST00000374339 TRAV13-2A0A0B4J235 113 aa6.29□□□□□ -1.4
PTPN20-202ENST00000374339 K7ERJ3 54 aa6.29□□□□□ -1.4
PTPN20-202ENST00000374339 GAGE2EQ4V326 116 aa6.29□□□□□ -1.4
PTPN20-202ENST00000374339 Q6ZRP5 223 aa6.29□□□□□ -1.4
PTPN20-202ENST00000374339 GAGE2DQ9UEU5 116 aa6.29□□□□□ -1.4
PTPN20-202ENST00000374339 TAX1BP3O14907 124 aa6.28□□□□□ -1.4
PTPN20-202ENST00000374339 C9orf163Q8N9P6 203 aa6.28□□□□□ -1.4
PTPN20-202ENST00000374339 XAGE1AQ9HD64 81 aa6.28□□□□□ -1.4
PTPN20-202ENST00000374339 TRBV10-2A0A0K0K1G8 114 aa6.26□□□□□ -1.41
PTPN20-202ENST00000374339 C9orf118A6NHY6 69 aa6.26□□□□□ -1.41
PTPN20-202ENST00000374339 C16orf90A8MZG2 172 aa6.26□□□□□ -1.41
PTPN20-202ENST00000374339 RTL8CO15255 209 aa6.26□□□□□ -1.41
PTPN20-202ENST00000374339 GAGE2BQ13066 116 aa6.26□□□□□ -1.41
PTPN20-202ENST00000374339 LINC00474Q9P2X8 69 aa6.26□□□□□ -1.41
PTPN20-202ENST00000374339 IGKV2-28A0A075B6P5 120 aa6.25□□□□□ -1.41
PTPN20-202ENST00000374339 IGKV2D-28P01615 120 aa6.25□□□□□ -1.41
PTPN20-202ENST00000374339 RPL13AP40429 203 aaKnown RBP6.25□□□□□ -1.41
PTPN20-202ENST00000374339 Q1RN00 199 aa6.25□□□□□ -1.41
PTPN20-202ENST00000374339 PLA2G2DQ9UNK4 145 aa6.25□□□□□ -1.41
PTPN20-202ENST00000374339 PLECQ15149 4684 aaKnown RBP6.25□□□□□ -1.41
PTPN20-202ENST00000374339 DNAH1Q9P2D7 4330 aa6.24□□□□□ -1.41
PTPN20-202ENST00000374339 TSPAN13O95857 204 aa6.24□□□□□ -1.41
PTPN20-202ENST00000374339 C9orf129Q5T035 196 aaKnown RBP6.24□□□□□ -1.41
PTPN20-202ENST00000374339 LYRM7Q5U5X0 104 aa6.24□□□□□ -1.41
PTPN20-202ENST00000374339 LINC00337Q8N6G1 96 aa6.24□□□□□ -1.41
PTPN20-202ENST00000374339 OR13C6PQ8NH95 151 aa6.24□□□□□ -1.41
PTPN20-202ENST00000374339 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
PTPN20-202ENST00000374339 TMEM126AQ9H061 195 aa6.24□□□□□ -1.41
PTPN20-202ENST00000374339 H3BUT2 72 aa6.23□□□□□ -1.41
PTPN20-202ENST00000374339 H7C2G1 150 aa6.23□□□□□ -1.41
PTPN20-202ENST00000374339 NCR3O14931 201 aa6.23□□□□□ -1.41
PTPN20-202ENST00000374339 VPREB1P12018 145 aa6.23□□□□□ -1.41
PTPN20-202ENST00000374339 S100A7L2Q5SY68 101 aa6.23□□□□□ -1.41
PTPN20-202ENST00000374339 LCE1DQ5T752 114 aa6.23□□□□□ -1.41
PTPN20-202ENST00000374339 LINC00336Q6ZUF6 198 aa6.23□□□□□ -1.41
PTPN20-202ENST00000374339 NKAPP1Q8N9T2 125 aa6.23□□□□□ -1.41
PTPN20-202ENST00000374339 CBY1Q9Y3M2 126 aa6.23□□□□□ -1.41
PTPN20-202ENST00000374339 A0A096LNI7 61 aa6.22□□□□□ -1.41
PTPN20-202ENST00000374339 IGLV5-52A0A0A0MRZ9 124 aa6.22□□□□□ -1.41
PTPN20-202ENST00000374339 M0R378 163 aa6.22□□□□□ -1.41
PTPN20-202ENST00000374339 COX6CP09669 75 aa6.22□□□□□ -1.41
PTPN20-202ENST00000374339 PSMB2P49721 201 aa6.22□□□□□ -1.41
PTPN20-202ENST00000374339 SDIM1Q6ZPB5 146 aa6.22□□□□□ -1.41
PTPN20-202ENST00000374339 IGLV5-37A0A075B6J1 123 aa6.21□□□□□ -1.41
PTPN20-202ENST00000374339 IGKV2-24A0A0C4DH68 120 aa6.21□□□□□ -1.41
PTPN20-202ENST00000374339 A0A1W2PPM0 123 aa6.21□□□□□ -1.41
PTPN20-202ENST00000374339 FABP2P12104 132 aa6.21□□□□□ -1.41
PTPN20-202ENST00000374339 PRR3P79522 188 aaKnown RBP6.21□□□□□ -1.41
PTPN20-202ENST00000374339 Q8NDZ9 215 aa6.21□□□□□ -1.41
PTPN20-202ENST00000374339 NAA38Q9BRA0 125 aaKnown RBP6.2□□□□□ -1.42
PTPN20-202ENST00000374339 IGLV6-57P01721 117 aa6.19□□□□□ -1.42
PTPN20-202ENST00000374339 SCGB1C2P0DMR2 95 aa6.19□□□□□ -1.42
PTPN20-202ENST00000374339 RPL28P46779 137 aaKnown RBP6.19□□□□□ -1.42
PTPN20-202ENST00000374339 VPS13DQ5THJ4 4388 aa6.19□□□□□ -1.42
PTPN20-202ENST00000374339 TRIAP1O43715 76 aa6.18□□□□□ -1.42
PTPN20-202ENST00000374339 VAMP3Q15836 100 aa6.18□□□□□ -1.42
PTPN20-202ENST00000374339 LINC01620Q4KN68 170 aa6.18□□□□□ -1.42
PTPN20-202ENST00000374339 SERTAD4-AS1Q5TG53 156 aa6.18□□□□□ -1.42
PTPN20-202ENST00000374339 FAM19A5Q7Z5A7 132 aaPredicted RBP6.18□□□□□ -1.42
PTPN20-202ENST00000374339 SMIM11BQ8TCY0 68 aa6.18□□□□□ -1.42
PTPN20-202ENST00000374339 ALMS1Q8TCU4 4167 aa6.18□□□□□ -1.42
PTPN20-202ENST00000374339 TRBV20-1A0A075B6N2 111 aa6.18□□□□□ -1.42
PTPN20-202ENST00000374339 TRBV10-3A0A0K0K1G6 114 aa6.18□□□□□ -1.42
PTPN20-202ENST00000374339 FAM168BA1KXE4 195 aa6.18□□□□□ -1.42
PTPN20-202ENST00000374339 GTF2H5Q6ZYL4 71 aa6.18□□□□□ -1.42
PTPN20-202ENST00000374339 MRPL55Q7Z7F7 128 aaKnown RBP6.18□□□□□ -1.42
PTPN20-202ENST00000374339 SPACA4Q8TDM5 124 aa6.18□□□□□ -1.42
PTPN20-202ENST00000374339 DPH3Q96FX2 82 aa6.18□□□□□ -1.42
PTPN20-202ENST00000374339 C22orf24Q9Y442 160 aa6.18□□□□□ -1.42
PTPN20-202ENST00000374339 KMT2AQ03164 3969 aa6.17□□□□□ -1.42
PTPN20-202ENST00000374339 TRAV23DV6A0A075B6W5 121 aa6.17□□□□□ -1.42
PTPN20-202ENST00000374339 M0QXV9 152 aa6.17□□□□□ -1.42
PTPN20-202ENST00000374339 C7orf33Q8WU49 177 aa6.17□□□□□ -1.42
PTPN20-202ENST00000374339 SPCS1Q9Y6A9 102 aa6.17□□□□□ -1.42
PTPN20-202ENST00000374339 GAGE10A6NGK3 116 aa6.16□□□□□ -1.42
PTPN20-202ENST00000374339 H0YGX0 51 aa6.16□□□□□ -1.42
PTPN20-202ENST00000374339 CHTF8P0CG12 524 aa6.16□□□□□ -1.42
PTPN20-202ENST00000374339 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms