RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 LINC01549A6NIU2 74 aa8.31□□□□□ -1.08
UBXN11-207ENST00000374223 A0A0U1RRA0 63 aa8.3□□□□□ -1.08
UBXN11-207ENST00000374223 M0R378 163 aa8.3□□□□□ -1.08
UBXN11-207ENST00000374223 CRYGAP11844 174 aa8.3□□□□□ -1.08
UBXN11-207ENST00000374223 UBE2AP49459 152 aa8.3□□□□□ -1.08
UBXN11-207ENST00000374223 TMEM170BQ5T4T1 132 aa8.29□□□□□ -1.08
UBXN11-207ENST00000374223 TMEM126AQ9H061 195 aa8.29□□□□□ -1.08
UBXN11-207ENST00000374223 FAM19A1Q7Z5A9 133 aa8.29□□□□□ -1.08
UBXN11-207ENST00000374223 C3orf22Q8N5N4 141 aa8.28□□□□□ -1.08
UBXN11-207ENST00000374223 TRGC2P03986 189 aa8.27□□□□□ -1.09
UBXN11-207ENST00000374223 CHTOPQ9Y3Y2 248 aaKnown RBP8.27□□□□□ -1.09
UBXN11-207ENST00000374223 TMEM223A0PJW6 202 aa8.26□□□□□ -1.09
UBXN11-207ENST00000374223 TMA7Q9Y2S6 64 aaKnown RBP8.26□□□□□ -1.09
UBXN11-207ENST00000374223 MUC17Q685J3 4493 aa8.25□□□□□ -1.09
UBXN11-207ENST00000374223 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
UBXN11-207ENST00000374223 FAM19A2Q8N3H0 131 aa8.25□□□□□ -1.09
UBXN11-207ENST00000374223 PLEKHB2Q96CS7 222 aa8.25□□□□□ -1.09
UBXN11-207ENST00000374223 SMIM13P0DJ93 91 aa8.24□□□□□ -1.09
UBXN11-207ENST00000374223 LINC00158P58513 81 aa8.24□□□□□ -1.09
UBXN11-207ENST00000374223 LINC00310P59036 64 aa8.23□□□□□ -1.09
UBXN11-207ENST00000374223 COX17Q14061 63 aa8.23□□□□□ -1.09
UBXN11-207ENST00000374223 IFI27L1Q96BM0 104 aa8.23□□□□□ -1.09
UBXN11-207ENST00000374223 FAT4Q6V0I7 4981 aa8.22□□□□□ -1.09
UBXN11-207ENST00000374223 HIST1H2BKO60814 126 aa8.22□□□□□ -1.09
UBXN11-207ENST00000374223 HIST1H2BJP06899 126 aa8.22□□□□□ -1.09
UBXN11-207ENST00000374223 HIST1H2BOP23527 126 aa8.22□□□□□ -1.09
UBXN11-207ENST00000374223 HIST1H2BBP33778 126 aa8.22□□□□□ -1.09
UBXN11-207ENST00000374223 HIST1H2BDP58876 126 aa8.22□□□□□ -1.09
UBXN11-207ENST00000374223 HIST1H2BCP62807 126 aa8.22□□□□□ -1.09
UBXN11-207ENST00000374223 HIST2H2BEQ16778 126 aa8.22□□□□□ -1.09
UBXN11-207ENST00000374223 FAM229BQ4G0N7 80 aa8.22□□□□□ -1.09
UBXN11-207ENST00000374223 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.22□□□□□ -1.09
UBXN11-207ENST00000374223 LINC00304Q8N9R0 145 aa8.22□□□□□ -1.09
UBXN11-207ENST00000374223 HIST1H2BHQ93079 126 aa8.22□□□□□ -1.09
UBXN11-207ENST00000374223 HIST1H2BNQ99877 126 aa8.22□□□□□ -1.09
UBXN11-207ENST00000374223 HIST1H2BMQ99879 126 aa8.22□□□□□ -1.09
UBXN11-207ENST00000374223 NCR3O14931 201 aa8.21□□□□□ -1.1
UBXN11-207ENST00000374223 TSPEAR-AS2P59090 65 aa8.21□□□□□ -1.1
UBXN11-207ENST00000374223 RPL24P83731 157 aaKnown RBP8.21□□□□□ -1.1
UBXN11-207ENST00000374223 HIGD2AQ9BW72 106 aa8.21□□□□□ -1.1
UBXN11-207ENST00000374223 TRAV12-1A0A0B4J245 112 aa8.2□□□□□ -1.1
UBXN11-207ENST00000374223 IGKV2D-26A0A0A0MRZ7 120 aa8.19□□□□□ -1.1
UBXN11-207ENST00000374223 S100A6P06703 90 aa8.19□□□□□ -1.1
UBXN11-207ENST00000374223 COA6Q5JTJ3 125 aaKnown RBP8.19□□□□□ -1.1
UBXN11-207ENST00000374223 C5orf52A6NGY3 159 aa8.18□□□□□ -1.1
UBXN11-207ENST00000374223 H0Y8G0 127 aa8.18□□□□□ -1.1
UBXN11-207ENST00000374223 MIR7-3HGQ8N6C7 128 aa8.18□□□□□ -1.1
UBXN11-207ENST00000374223 CHCHD1Q96BP2 118 aaKnown RBP8.18□□□□□ -1.1
UBXN11-207ENST00000374223 SPRR4Q96PI1 79 aa8.18□□□□□ -1.1
UBXN11-207ENST00000374223 KRTAP9-6A0A140TA67 174 aa8.17□□□□□ -1.1
UBXN11-207ENST00000374223 BOD1L2Q8IYS8 172 aa8.17□□□□□ -1.1
UBXN11-207ENST00000374223 DAND5Q8N907 189 aa8.17□□□□□ -1.1
UBXN11-207ENST00000374223 KRTAP4-16G5E9R7 235 aaPredicted RBP8.16□□□□□ -1.1
UBXN11-207ENST00000374223 PPDPFQ9H3Y8 114 aa8.16□□□□□ -1.1
UBXN11-207ENST00000374223 LOC105371267A0A1B0GV96 52 aa8.15□□□□□ -1.1
UBXN11-207ENST00000374223 MEIG1Q5JSS6 88 aa8.15□□□□□ -1.1
UBXN11-207ENST00000374223 PMCHL2Q9BQD1 86 aa8.15□□□□□ -1.1
UBXN11-207ENST00000374223 TRBV10-3A0A0K0K1G6 114 aa8.14□□□□□ -1.11
UBXN11-207ENST00000374223 SERF1AO75920 110 aa8.14□□□□□ -1.11
UBXN11-207ENST00000374223 SPRR1AP35321 89 aa8.14□□□□□ -1.11
UBXN11-207ENST00000374223 SNRPEP62304 92 aaKnown RBP8.14□□□□□ -1.11
UBXN11-207ENST00000374223 SMCR5Q8TEV8 140 aa8.14□□□□□ -1.11
UBXN11-207ENST00000374223 NDUFA12Q9UI09 145 aa8.14□□□□□ -1.11
UBXN11-207ENST00000374223 IGLV7-46A0A075B6I9 117 aa8.13□□□□□ -1.11
UBXN11-207ENST00000374223 EIF4EBP3O60516 100 aaPredicted RBP8.13□□□□□ -1.11
UBXN11-207ENST00000374223 HSBP1O75506 76 aa8.13□□□□□ -1.11
UBXN11-207ENST00000374223 ERC2-IT1O76042 136 aa8.13□□□□□ -1.11
UBXN11-207ENST00000374223 TPRXLQ17RH7 258 aa8.12□□□□□ -1.11
UBXN11-207ENST00000374223 SFTA2Q6UW10 78 aa8.12□□□□□ -1.11
UBXN11-207ENST00000374223 KCNQ1DNQ9H478 68 aa8.12□□□□□ -1.11
UBXN11-207ENST00000374223 PRYO14603 147 aa8.11□□□□□ -1.11
UBXN11-207ENST00000374223 CDIP1Q9H305 208 aa8.11□□□□□ -1.11
UBXN11-207ENST00000374223 FABP4P15090 132 aa8.1□□□□□ -1.11
UBXN11-207ENST00000374223 CTAG1AP78358 180 aa8.1□□□□□ -1.11
UBXN11-207ENST00000374223 LEPROTO15243 131 aa8.09□□□□□ -1.11
UBXN11-207ENST00000374223 HIST3H2BBQ8N257 126 aa8.09□□□□□ -1.11
UBXN11-207ENST00000374223 LINC00337Q8N6G1 96 aa8.09□□□□□ -1.11
UBXN11-207ENST00000374223 Q8NBF4 154 aa8.09□□□□□ -1.11
UBXN11-207ENST00000374223 B5MCH6 92 aa8.08□□□□□ -1.12
UBXN11-207ENST00000374223 LEPROTL1O95214 131 aa8.08□□□□□ -1.12
UBXN11-207ENST00000374223 HERV-K104P63124 156 aa8.08□□□□□ -1.12
UBXN11-207ENST00000374223 SOSTDC1Q6X4U4 206 aa8.08□□□□□ -1.12
UBXN11-207ENST00000374223 Q9BRP9 147 aa8.08□□□□□ -1.12
UBXN11-207ENST00000374223 MYMXA0A1B0GTQ4 84 aa8.07□□□□□ -1.12
UBXN11-207ENST00000374223 ETDCA0A1B0GVM5 59 aa8.06□□□□□ -1.12
UBXN11-207ENST00000374223 S100A2P29034 98 aa8.06□□□□□ -1.12
UBXN11-207ENST00000374223 NPC2P61916 151 aa8.06□□□□□ -1.12
UBXN11-207ENST00000374223 LOC107984156A0A0G2JMH3 177 aa8.05□□□□□ -1.12
UBXN11-207ENST00000374223 J3QQQ9 107 aa8.05□□□□□ -1.12
UBXN11-207ENST00000374223 ADAMTSL4-AS1Q5T5F5 129 aa8.05□□□□□ -1.12
UBXN11-207ENST00000374223 GAGE2AQ6NT46 116 aa8.05□□□□□ -1.12
UBXN11-207ENST00000374223 ARL17AQ8IVW1 177 aa8.05□□□□□ -1.12
UBXN11-207ENST00000374223 KRTAP4-1Q9BYQ7 146 aa8.05□□□□□ -1.12
UBXN11-207ENST00000374223 LINC00483Q53H64 154 aa8.04□□□□□ -1.12
UBXN11-207ENST00000374223 HIST1H2BLQ99880 126 aa8.04□□□□□ -1.12
UBXN11-207ENST00000374223 DPM2O94777 84 aa8.03□□□□□ -1.12
UBXN11-207ENST00000374223 DDTP30046 118 aa8.03□□□□□ -1.12
UBXN11-207ENST00000374223 IGLV9-49A0A0B4J1Y8 123 aa8.03□□□□□ -1.12
UBXN11-207ENST00000374223 MOBPQ13875 183 aa8.03□□□□□ -1.12
UBXN11-207ENST00000374223 KRTAP13-3Q3SY46 172 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms