RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 KIAA0087Q14695 138 aa10.13□□□□□ -0.79
COL9A2-202ENST00000372748 ATP5EP2Q5VTU8 51 aa10.13□□□□□ -0.79
COL9A2-202ENST00000372748 NSD1Q96L73 2696 aaPredicted RBP10.13□□□□□ -0.79
COL9A2-202ENST00000372748 LAMTOR3Q9UHA4 124 aa10.12□□□□□ -0.79
COL9A2-202ENST00000372748 A0A1B0GUV1 79 aa10.12□□□□□ -0.79
COL9A2-202ENST00000372748 SPATA3Q8NHX4 192 aa10.12□□□□□ -0.79
COL9A2-202ENST00000372748 CHCHD10Q8WYQ3 142 aaPredicted RBP10.11□□□□□ -0.79
COL9A2-202ENST00000372748 DEFB4AO15263 64 aa10.11□□□□□ -0.79
COL9A2-202ENST00000372748 NDUFC2O95298 119 aa10.11□□□□□ -0.79
COL9A2-202ENST00000372748 LYPD5Q6UWN5 251 aa10.11□□□□□ -0.79
COL9A2-202ENST00000372748 ANGP03950 147 aaKnown RBP10.1□□□□□ -0.79
COL9A2-202ENST00000372748 HAMPP81172 84 aa10.1□□□□□ -0.79
COL9A2-202ENST00000372748 RBM3P98179 157 aaKnown RBP10.1□□□□□ -0.79
COL9A2-202ENST00000372748 LINC00482Q8N8I6 264 aa10.1□□□□□ -0.79
COL9A2-202ENST00000372748 HRCT1Q6UXD1 115 aa10.1□□□□□ -0.79
COL9A2-202ENST00000372748 LINC00575Q6W349 94 aa10.1□□□□□ -0.79
COL9A2-202ENST00000372748 C6orf223Q8N319 242 aa10.09□□□□□ -0.79
COL9A2-202ENST00000372748 C10orf25Q5T742 122 aa10.09□□□□□ -0.79
COL9A2-202ENST00000372748 CD164L2Q6UWJ8 174 aa10.09□□□□□ -0.79
COL9A2-202ENST00000372748 Q6ZQT0 140 aa10.09□□□□□ -0.79
COL9A2-202ENST00000372748 ATRQ13535 2644 aa10.09□□□□□ -0.79
COL9A2-202ENST00000372748 Q5XG85 94 aa10.08□□□□□ -0.8
COL9A2-202ENST00000372748 COX17Q14061 63 aa10.08□□□□□ -0.8
COL9A2-202ENST00000372748 UNQ6190/PRO20217Q6UXQ8 127 aa10.07□□□□□ -0.8
COL9A2-202ENST00000372748 X6R8D5 127 aa10.07□□□□□ -0.8
COL9A2-202ENST00000372748 REG3AQ06141 175 aa10.07□□□□□ -0.8
COL9A2-202ENST00000372748 PRO0255Q9UI72 69 aa10.07□□□□□ -0.8
COL9A2-202ENST00000372748 LINC01547P58512 204 aaPredicted RBP10.06□□□□□ -0.8
COL9A2-202ENST00000372748 Q6ZQY7 126 aa10.06□□□□□ -0.8
COL9A2-202ENST00000372748 MAST4O15021 2626 aa10.05□□□□□ -0.8
COL9A2-202ENST00000372748 TRAV10A0A0B4J240 114 aa10.05□□□□□ -0.8
COL9A2-202ENST00000372748 TRBV10-3A0A0K0K1G6 114 aa10.05□□□□□ -0.8
COL9A2-202ENST00000372748 ZNF561-AS1K7EIQ3 104 aa10.05□□□□□ -0.8
COL9A2-202ENST00000372748 IGHV4-28A0A0C4DH34 117 aa10.04□□□□□ -0.8
COL9A2-202ENST00000372748 Q6ZVQ6 151 aa10.04□□□□□ -0.8
COL9A2-202ENST00000372748 SNURFQ9Y675 71 aa10.04□□□□□ -0.8
COL9A2-202ENST00000372748 DEFB135Q30KP9 77 aa10.04□□□□□ -0.8
COL9A2-202ENST00000372748 TENM1Q9UKZ4 2725 aa10.03□□□□□ -0.8
COL9A2-202ENST00000372748 FAM236DA0A1B0GTK5 79 aa10.03□□□□□ -0.8
COL9A2-202ENST00000372748 FAM236CP0DP71 79 aa10.03□□□□□ -0.8
COL9A2-202ENST00000372748 SCXQ7RTU7 201 aa10.03□□□□□ -0.8
COL9A2-202ENST00000372748 LINC00612Q8N6U2 182 aa10.03□□□□□ -0.8
COL9A2-202ENST00000372748 H7BZZ5 65 aa10.02□□□□□ -0.81
COL9A2-202ENST00000372748 LOC110117498A0A087WWA1 95 aa10.01□□□□□ -0.81
COL9A2-202ENST00000372748 SPAG11BQ08648 103 aa10.01□□□□□ -0.81
COL9A2-202ENST00000372748 NDUFC2-KCTD14E9PQ53 114 aa10.01□□□□□ -0.81
COL9A2-202ENST00000372748 CYSRT1A8MQ03 144 aa10□□□□□ -0.81
COL9A2-202ENST00000372748 WIPF1O43516 503 aa10□□□□□ -0.81
COL9A2-202ENST00000372748 XAGE1AQ9HD64 81 aa10□□□□□ -0.81
COL9A2-202ENST00000372748 INAFM1C9JVW0 142 aa10□□□□□ -0.81
COL9A2-202ENST00000372748 RMI2Q96E14 147 aa10□□□□□ -0.81
COL9A2-202ENST00000372748 TRAV7A0A075B6U4 112 aa10□□□□□ -0.81
COL9A2-202ENST00000372748 IGLV6-57P01721 117 aa9.98□□□□□ -0.81
COL9A2-202ENST00000372748 TRRAPQ9Y4A5 3859 aa9.98□□□□□ -0.81
COL9A2-202ENST00000372748 HTN3P15516 51 aa9.97□□□□□ -0.81
COL9A2-202ENST00000372748 MUC7Q8TAX7 377 aa9.96□□□□□ -0.81
COL9A2-202ENST00000372748 CELA1Q9UNI1 258 aa9.96□□□□□ -0.81
COL9A2-202ENST00000372748 DAD1P61803 113 aa9.95□□□□□ -0.82
COL9A2-202ENST00000372748 KLK12Q9UKR0 248 aa9.95□□□□□ -0.82
COL9A2-202ENST00000372748 TM2D3Q9BRN9 247 aa9.95□□□□□ -0.82
COL9A2-202ENST00000372748 F8WEM9 126 aa9.94□□□□□ -0.82
COL9A2-202ENST00000372748 LYRM9A8MSI8 78 aa9.94□□□□□ -0.82
COL9A2-202ENST00000372748 C9orf66Q5T8R8 295 aa9.94□□□□□ -0.82
COL9A2-202ENST00000372748 KLKP1Q107X0 134 aa9.93□□□□□ -0.82
COL9A2-202ENST00000372748 DIRC1Q969H9 104 aa9.93□□□□□ -0.82
COL9A2-202ENST00000372748 A0A0J9YWU9 116 aa9.93□□□□□ -0.82
COL9A2-202ENST00000372748 IGHV4-30-4P0DP06 118 aa9.93□□□□□ -0.82
COL9A2-202ENST00000372748 SERP1Q9Y6X1 66 aa9.92□□□□□ -0.82
COL9A2-202ENST00000372748 CXCL6P80162 114 aa9.92□□□□□ -0.82
COL9A2-202ENST00000372748 ZNF73O43830 326 aaPredicted RBP9.91□□□□□ -0.82
COL9A2-202ENST00000372748 C6orf48Q9UBA6 75 aa9.91□□□□□ -0.82
COL9A2-202ENST00000372748 Q8N9L7 120 aa9.91□□□□□ -0.82
COL9A2-202ENST00000372748 STAB1Q9NY15 2570 aa9.91□□□□□ -0.82
COL9A2-202ENST00000372748 PDE6GP18545 87 aa9.9□□□□□ -0.82
COL9A2-202ENST00000372748 TRBV7-4A0A0J9YYF1 115 aa9.89□□□□□ -0.83
COL9A2-202ENST00000372748 BCE1O60756 84 aa9.89□□□□□ -0.83
COL9A2-202ENST00000372748 COX7BP24311 80 aa9.89□□□□□ -0.83
COL9A2-202ENST00000372748 APOC4P55056 127 aa9.89□□□□□ -0.83
COL9A2-202ENST00000372748 HIGD2BQ4VC39 106 aa9.88□□□□□ -0.83
COL9A2-202ENST00000372748 EPM2AB3EWF7 344 aa9.88□□□□□ -0.83
COL9A2-202ENST00000372748 Q8NAQ8 132 aa9.88□□□□□ -0.83
COL9A2-202ENST00000372748 COL6A5A8TX70 2615 aa9.87□□□□□ -0.83
COL9A2-202ENST00000372748 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.87□□□□□ -0.83
COL9A2-202ENST00000372748 LINC00336Q6ZUF6 198 aa9.86□□□□□ -0.83
COL9A2-202ENST00000372748 FBN1P35555 2871 aaKnown RBP9.86□□□□□ -0.83
COL9A2-202ENST00000372748 ELOF1P60002 83 aaKnown RBP9.85□□□□□ -0.83
COL9A2-202ENST00000372748 NREPQ16612 68 aa9.85□□□□□ -0.83
COL9A2-202ENST00000372748 FP248Q71RG6 208 aaPredicted RBP9.85□□□□□ -0.83
COL9A2-202ENST00000372748 LELP1Q5T871 98 aa9.85□□□□□ -0.83
COL9A2-202ENST00000372748 PRR34Q9NV39 138 aa9.85□□□□□ -0.83
COL9A2-202ENST00000372748 LINC00474Q9P2X8 69 aa9.85□□□□□ -0.83
COL9A2-202ENST00000372748 BPY2O14599 106 aa9.84□□□□□ -0.83
COL9A2-202ENST00000372748 SPART-AS1P0CW21 52 aa9.84□□□□□ -0.83
COL9A2-202ENST00000372748 MIFP14174 115 aa9.84□□□□□ -0.83
COL9A2-202ENST00000372748 GVQW2A0A096LPI5 108 aaPredicted RBP9.82□□□□□ -0.84
COL9A2-202ENST00000372748 CAMK2N2Q96S95 79 aa9.82□□□□□ -0.84
COL9A2-202ENST00000372748 TRBV7-6A0A0J9YX20 115 aa9.81□□□□□ -0.84
COL9A2-202ENST00000372748 H3BQ85 93 aa9.81□□□□□ -0.84
COL9A2-202ENST00000372748 VPREB1P12018 145 aa9.81□□□□□ -0.84
COL9A2-202ENST00000372748 TMEM254Q8TBM7 123 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms