RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 NKAPP1Q8N9T2 125 aa12.09□□□□□ -0.47
TMEM53-205ENST00000372244 GAGE10A6NGK3 116 aa12.08□□□□□ -0.47
TMEM53-205ENST00000372244 LINC00158P58513 81 aa12.08□□□□□ -0.47
TMEM53-205ENST00000372244 BCE1O60756 84 aa12.08□□□□□ -0.48
TMEM53-205ENST00000372244 DPM2O94777 84 aa12.08□□□□□ -0.48
TMEM53-205ENST00000372244 HERV-K104P63124 156 aa12.08□□□□□ -0.48
TMEM53-205ENST00000372244 Q8NDZ9 215 aa12.08□□□□□ -0.48
TMEM53-205ENST00000372244 MAP1LC3CQ9BXW4 147 aa12.08□□□□□ -0.48
TMEM53-205ENST00000372244 RPL24P83731 157 aaKnown RBP12.07□□□□□ -0.48
TMEM53-205ENST00000372244 PMCHL2Q9BQD1 86 aa12.07□□□□□ -0.48
TMEM53-205ENST00000372244 NDUFA12Q9UI09 145 aa12.07□□□□□ -0.48
TMEM53-205ENST00000372244 KRTAP1-4P0C5Y4 121 aa12.06□□□□□ -0.48
TMEM53-205ENST00000372244 LEPROTO15243 131 aa12.05□□□□□ -0.48
TMEM53-205ENST00000372244 IGKCP01834 107 aa12.05□□□□□ -0.48
TMEM53-205ENST00000372244 IGLV1-50A0A075B6I6 118 aa12.04□□□□□ -0.48
TMEM53-205ENST00000372244 A0A0U1RRA0 63 aa12.04□□□□□ -0.48
TMEM53-205ENST00000372244 MYMXA0A1B0GTQ4 84 aa12.04□□□□□ -0.48
TMEM53-205ENST00000372244 SMIM13P0DJ93 91 aa12.04□□□□□ -0.48
TMEM53-205ENST00000372244 TSPEAR-AS2P59090 65 aa12.04□□□□□ -0.48
TMEM53-205ENST00000372244 COA6Q5JTJ3 125 aaKnown RBP12.04□□□□□ -0.48
TMEM53-205ENST00000372244 PLEKHB2Q96CS7 222 aa12.04□□□□□ -0.48
TMEM53-205ENST00000372244 LINC00587B1AMM8 73 aa12.03□□□□□ -0.48
TMEM53-205ENST00000372244 IGKV2-28A0A075B6P5 120 aa12.02□□□□□ -0.49
TMEM53-205ENST00000372244 SYS1-DBNDD2H3BUS1 97 aa12.02□□□□□ -0.49
TMEM53-205ENST00000372244 J3QQQ9 107 aa12.02□□□□□ -0.49
TMEM53-205ENST00000372244 IGKV2D-28P01615 120 aa12.02□□□□□ -0.49
TMEM53-205ENST00000372244 RPL28P46779 137 aaKnown RBP12.02□□□□□ -0.49
TMEM53-205ENST00000372244 PRR26Q8N8Z3 221 aa12.02□□□□□ -0.49
TMEM53-205ENST00000372244 MEIG1Q5JSS6 88 aa12.01□□□□□ -0.49
TMEM53-205ENST00000372244 KRTAP13-1Q8IUC0 172 aa12.01□□□□□ -0.49
TMEM53-205ENST00000372244 ATP6V1G1O75348 118 aa12□□□□□ -0.49
TMEM53-205ENST00000372244 HERVK_113P61574 105 aa12□□□□□ -0.49
TMEM53-205ENST00000372244 MIR7-3HGQ8N6C7 128 aa12□□□□□ -0.49
TMEM53-205ENST00000372244 NMUP48645 174 aa11.98□□□□□ -0.49
TMEM53-205ENST00000372244 LOC107984156A0A0G2JMH3 177 aa11.97□□□□□ -0.49
TMEM53-205ENST00000372244 LINC01545Q5VT33 79 aa11.97□□□□□ -0.49
TMEM53-205ENST00000372244 ARL17AQ8IVW1 177 aa11.97□□□□□ -0.49
TMEM53-205ENST00000372244 PET117Q6UWS5 81 aa11.96□□□□□ -0.49
TMEM53-205ENST00000372244 TMEM238C9JI98 176 aa11.95□□□□□ -0.5
TMEM53-205ENST00000372244 E9PLD3 99 aa11.95□□□□□ -0.5
TMEM53-205ENST00000372244 M0R378 163 aa11.95□□□□□ -0.5
TMEM53-205ENST00000372244 BOD1L2Q8IYS8 172 aa11.95□□□□□ -0.5
TMEM53-205ENST00000372244 TMEM126AQ9H061 195 aa11.95□□□□□ -0.5
TMEM53-205ENST00000372244 LGALS3P17931 250 aaKnown RBP11.95□□□□□ -0.5
TMEM53-205ENST00000372244 C3orf79P0CE67 100 aa11.93□□□□□ -0.5
TMEM53-205ENST00000372244 S100A1P23297 94 aa11.93□□□□□ -0.5
TMEM53-205ENST00000372244 UBE2AP49459 152 aa11.93□□□□□ -0.5
TMEM53-205ENST00000372244 IGKV2D-26A0A0A0MRZ7 120 aa11.92□□□□□ -0.5
TMEM53-205ENST00000372244 DAND5Q8N907 189 aa11.91□□□□□ -0.5
TMEM53-205ENST00000372244 RPL13AP40429 203 aaKnown RBP11.9□□□□□ -0.5
TMEM53-205ENST00000372244 FAM19A1Q7Z5A9 133 aa11.89□□□□□ -0.51
TMEM53-205ENST00000372244 A0A0J9YXY3 114 aa11.89□□□□□ -0.51
TMEM53-205ENST00000372244 PRLHP81277 87 aa11.89□□□□□ -0.51
TMEM53-205ENST00000372244 KCNQ1DNQ9H478 68 aa11.89□□□□□ -0.51
TMEM53-205ENST00000372244 ADAMTSL4-AS1Q5T5F5 129 aa11.87□□□□□ -0.51
TMEM53-205ENST00000372244 A0A087X002 238 aa11.86□□□□□ -0.51
TMEM53-205ENST00000372244 NCR3O14931 201 aa11.86□□□□□ -0.51
TMEM53-205ENST00000372244 KRTDAPP60985 99 aa11.86□□□□□ -0.51
TMEM53-205ENST00000372244 SPRR1AP35321 89 aa11.85□□□□□ -0.51
TMEM53-205ENST00000372244 UBR4Q5T4S7 5183 aa11.85□□□□□ -0.51
TMEM53-205ENST00000372244 TRBV10-2A0A0K0K1G8 114 aa11.84□□□□□ -0.51
TMEM53-205ENST00000372244 CRYGAP11844 174 aa11.84□□□□□ -0.51
TMEM53-205ENST00000372244 ANAPC11Q9NYG5 84 aa11.84□□□□□ -0.51
TMEM53-205ENST00000372244 TRBV10-3A0A0K0K1G6 114 aa11.83□□□□□ -0.52
TMEM53-205ENST00000372244 KRTAP4-16G5E9R7 235 aaPredicted RBP11.83□□□□□ -0.52
TMEM53-205ENST00000372244 PRYO14603 147 aa11.83□□□□□ -0.52
TMEM53-205ENST00000372244 EIF4EBP3O60516 100 aaPredicted RBP11.83□□□□□ -0.52
TMEM53-205ENST00000372244 NDUFC2O95298 119 aa11.83□□□□□ -0.52
TMEM53-205ENST00000372244 SOSTDC1Q6X4U4 206 aa11.83□□□□□ -0.52
TMEM53-205ENST00000372244 LITAFQ99732 161 aa11.83□□□□□ -0.52
TMEM53-205ENST00000372244 FAM229BQ4G0N7 80 aa11.82□□□□□ -0.52
TMEM53-205ENST00000372244 LINC00337Q8N6G1 96 aa11.82□□□□□ -0.52
TMEM53-205ENST00000372244 MIEN1Q9BRT3 115 aa11.81□□□□□ -0.52
TMEM53-205ENST00000372244 LRP2P98164 4655 aa11.8□□□□□ -0.52
TMEM53-205ENST00000372244 TIMM17BO60830 172 aa11.8□□□□□ -0.52
TMEM53-205ENST00000372244 SPANXB1Q9NS25 103 aaPredicted RBP11.8□□□□□ -0.52
TMEM53-205ENST00000372244 KRTAP13-2Q52LG2 175 aa11.79□□□□□ -0.52
TMEM53-205ENST00000372244 C20orf202A1L168 122 aa11.78□□□□□ -0.52
TMEM53-205ENST00000372244 TTTY13Q9BZ97 58 aa11.78□□□□□ -0.52
TMEM53-205ENST00000372244 ZNF815PA8K554 130 aa11.77□□□□□ -0.52
TMEM53-205ENST00000372244 IGLV6-57P01721 117 aa11.77□□□□□ -0.52
TMEM53-205ENST00000372244 DDTP30046 118 aa11.77□□□□□ -0.52
TMEM53-205ENST00000372244 HIGD2AQ9BW72 106 aa11.77□□□□□ -0.52
TMEM53-205ENST00000372244 HIST3H2BBQ8N257 126 aa11.76□□□□□ -0.53
TMEM53-205ENST00000372244 TYMSOSQ8TAI1 123 aa11.76□□□□□ -0.53
TMEM53-205ENST00000372244 NPC2P61916 151 aa11.76□□□□□ -0.53
TMEM53-205ENST00000372244 LINC00308Q8TCZ7 52 aa11.76□□□□□ -0.53
TMEM53-205ENST00000372244 AKR1D1P51857 326 aa11.75□□□□□ -0.53
TMEM53-205ENST00000372244 S100A12P80511 92 aa11.75□□□□□ -0.53
TMEM53-205ENST00000372244 HIST1H2BLQ99880 126 aa11.75□□□□□ -0.53
TMEM53-205ENST00000372244 ETDCA0A1B0GVM5 59 aa11.74□□□□□ -0.53
TMEM53-205ENST00000372244 ANKRD39Q53RE8 183 aa11.74□□□□□ -0.53
TMEM53-205ENST00000372244 B5MCH6 92 aa11.73□□□□□ -0.53
TMEM53-205ENST00000372244 ATOH7Q8N100 152 aa11.73□□□□□ -0.53
TMEM53-205ENST00000372244 SPRR4Q96PI1 79 aa11.73□□□□□ -0.53
TMEM53-205ENST00000372244 S100A7L2Q5SY68 101 aa11.72□□□□□ -0.53
TMEM53-205ENST00000372244 SMCR5Q8TEV8 140 aa11.72□□□□□ -0.53
TMEM53-205ENST00000372244 SPANXCQ9NY87 97 aa11.71□□□□□ -0.53
TMEM53-205ENST00000372244 S100A2P29034 98 aa11.7□□□□□ -0.54
TMEM53-205ENST00000372244 ZNF706Q9Y5V0 76 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms