RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 LINC00526Q96FQ7 95 aa8.64□□□□□ -1.03
LDB3-203ENST00000372056 IGKV2D-24A0A075B6R9 120 aa8.62□□□□□ -1.03
LDB3-203ENST00000372056 NTN5Q8WTR8 489 aaPredicted RBP8.62□□□□□ -1.03
LDB3-203ENST00000372056 C9JAW5 83 aa8.62□□□□□ -1.03
LDB3-203ENST00000372056 LINC01620Q4KN68 170 aa8.62□□□□□ -1.03
LDB3-203ENST00000372056 CLEC2BQ92478 149 aa8.62□□□□□ -1.03
LDB3-203ENST00000372056 GVQW2A0A096LPI5 108 aaPredicted RBP8.61□□□□□ -1.03
LDB3-203ENST00000372056 LST1O00453 97 aa8.61□□□□□ -1.03
LDB3-203ENST00000372056 C15orf56Q8N910 161 aa8.6□□□□□ -1.03
LDB3-203ENST00000372056 NBDYA0A0U1RRE5 68 aa8.6□□□□□ -1.03
LDB3-203ENST00000372056 RPL28P46779 137 aaKnown RBP8.6□□□□□ -1.03
LDB3-203ENST00000372056 C2orf48Q96LS8 159 aa8.6□□□□□ -1.03
LDB3-203ENST00000372056 ZNF561-AS1K7EIQ3 104 aa8.59□□□□□ -1.03
LDB3-203ENST00000372056 NDUFC2O95298 119 aa8.59□□□□□ -1.03
LDB3-203ENST00000372056 HIGD2BQ4VC39 106 aa8.59□□□□□ -1.03
LDB3-203ENST00000372056 CASC10Q5T4H9 136 aa8.59□□□□□ -1.03
LDB3-203ENST00000372056 Q6Q795 121 aa8.59□□□□□ -1.03
LDB3-203ENST00000372056 ANAPC13Q9BS18 74 aa8.59□□□□□ -1.03
LDB3-203ENST00000372056 C6orf48Q9UBA6 75 aa8.59□□□□□ -1.03
LDB3-203ENST00000372056 TRBV10-2A0A0K0K1G8 114 aa8.58□□□□□ -1.04
LDB3-203ENST00000372056 C14orf177Q52M58 125 aa8.58□□□□□ -1.04
LDB3-203ENST00000372056 Q9HAA7 133 aa8.58□□□□□ -1.04
LDB3-203ENST00000372056 SMIM11BQ8TCY0 68 aa8.57□□□□□ -1.04
LDB3-203ENST00000372056 CAMK2N2Q96S95 79 aa8.56□□□□□ -1.04
LDB3-203ENST00000372056 PRR3P79522 188 aaKnown RBP8.55□□□□□ -1.04
LDB3-203ENST00000372056 Q8NDZ9 215 aa8.55□□□□□ -1.04
LDB3-203ENST00000372056 OR13C6PQ8NH95 151 aa8.55□□□□□ -1.04
LDB3-203ENST00000372056 PSCAO43653 123 aa8.55□□□□□ -1.04
LDB3-203ENST00000372056 GAGE2BQ13066 116 aa8.55□□□□□ -1.04
LDB3-203ENST00000372056 GAGE2EQ4V326 116 aa8.55□□□□□ -1.04
LDB3-203ENST00000372056 GAGE2DQ9UEU5 116 aa8.55□□□□□ -1.04
LDB3-203ENST00000372056 H3BT86 120 aa8.54□□□□□ -1.04
LDB3-203ENST00000372056 SNCGO76070 127 aa8.54□□□□□ -1.04
LDB3-203ENST00000372056 PRKDCP78527 4128 aaKnown RBP8.54□□□□□ -1.04
LDB3-203ENST00000372056 NDUFV3P56181 108 aaKnown RBP8.53□□□□□ -1.04
LDB3-203ENST00000372056 Q6ZRU5 148 aa8.53□□□□□ -1.04
LDB3-203ENST00000372056 FAM218AQ96MZ4 157 aa8.53□□□□□ -1.04
LDB3-203ENST00000372056 PKIGQ9Y2B9 76 aa8.53□□□□□ -1.04
LDB3-203ENST00000372056 TRACP01848 142 aa8.53□□□□□ -1.04
LDB3-203ENST00000372056 TENM2Q9NT68 2774 aa8.52□□□□□ -1.05
LDB3-203ENST00000372056 TEX49A0A1B0GTD5 131 aa8.51□□□□□ -1.05
LDB3-203ENST00000372056 FAM240AA0A1B0GVK7 77 aa8.51□□□□□ -1.05
LDB3-203ENST00000372056 LINC00476Q8WZB0 136 aa8.51□□□□□ -1.05
LDB3-203ENST00000372056 TMEM126AQ9H061 195 aa8.51□□□□□ -1.05
LDB3-203ENST00000372056 H0YGX0 51 aa8.51□□□□□ -1.05
LDB3-203ENST00000372056 NCR3O14931 201 aa8.51□□□□□ -1.05
LDB3-203ENST00000372056 Q6ZR54 194 aa8.5□□□□□ -1.05
LDB3-203ENST00000372056 XAGE1AQ9HD64 81 aa8.5□□□□□ -1.05
LDB3-203ENST00000372056 USP17L23D6RBM5 183 aa8.49□□□□□ -1.05
LDB3-203ENST00000372056 LY6G6CO95867 125 aa8.49□□□□□ -1.05
LDB3-203ENST00000372056 SYCNQ0VAF6 134 aa8.49□□□□□ -1.05
LDB3-203ENST00000372056 KRTAP1-5Q9BYS1 174 aa8.49□□□□□ -1.05
LDB3-203ENST00000372056 NDUFC2-KCTD14E9PQ53 114 aa8.49□□□□□ -1.05
LDB3-203ENST00000372056 A0A087WYN8 130 aa8.48□□□□□ -1.05
LDB3-203ENST00000372056 DYNC2H1Q8NCM8 4307 aaKnown RBP8.48□□□□□ -1.05
LDB3-203ENST00000372056 CSMD3Q7Z407 3707 aa8.47□□□□□ -1.05
LDB3-203ENST00000372056 S100A7L2Q5SY68 101 aa8.47□□□□□ -1.05
LDB3-203ENST00000372056 SS18L2Q9UHA2 77 aa8.47□□□□□ -1.05
LDB3-203ENST00000372056 DNAH1Q9P2D7 4330 aa8.47□□□□□ -1.05
LDB3-203ENST00000372056 B5MCH6 92 aa8.47□□□□□ -1.05
LDB3-203ENST00000372056 IGLV6-57P01721 117 aa8.47□□□□□ -1.05
LDB3-203ENST00000372056 RPL18AQ02543 176 aaKnown RBP8.47□□□□□ -1.05
LDB3-203ENST00000372056 C1orf134Q5TEV5 83 aa8.47□□□□□ -1.05
LDB3-203ENST00000372056 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.06
LDB3-203ENST00000372056 TRBV7-7A0A0K0K1E9 115 aa8.45□□□□□ -1.06
LDB3-203ENST00000372056 CNBPP62633 177 aaKnown RBP8.45□□□□□ -1.06
LDB3-203ENST00000372056 Q6ZRP5 223 aa8.45□□□□□ -1.06
LDB3-203ENST00000372056 CCDC179H3BU77 68 aa8.45□□□□□ -1.06
LDB3-203ENST00000372056 SLPIP03973 132 aa8.45□□□□□ -1.06
LDB3-203ENST00000372056 BAALC-AS2P0C853 105 aa8.45□□□□□ -1.06
LDB3-203ENST00000372056 VPREB1P12018 145 aa8.45□□□□□ -1.06
LDB3-203ENST00000372056 LYSTQ99698 3801 aa8.44□□□□□ -1.06
LDB3-203ENST00000372056 DNAH7Q8WXX0 4024 aa8.44□□□□□ -1.06
LDB3-203ENST00000372056 LECT2O14960 151 aa8.44□□□□□ -1.06
LDB3-203ENST00000372056 Q6ZRN7 208 aaPredicted RBP8.44□□□□□ -1.06
LDB3-203ENST00000372056 DNAL4O96015 105 aa8.43□□□□□ -1.06
LDB3-203ENST00000372056 C6orf99Q4VX62 202 aa8.43□□□□□ -1.06
LDB3-203ENST00000372056 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
LDB3-203ENST00000372056 C22orf24Q9Y442 160 aa8.43□□□□□ -1.06
LDB3-203ENST00000372056 M0R2N4 97 aa8.42□□□□□ -1.06
LDB3-203ENST00000372056 ACYP1P07311 99 aa8.42□□□□□ -1.06
LDB3-203ENST00000372056 A0A1B0GX51 115 aa8.41□□□□□ -1.06
LDB3-203ENST00000372056 C9orf129Q5T035 196 aaKnown RBP8.41□□□□□ -1.06
LDB3-203ENST00000372056 LRCOL1A6NCL2 159 aa8.4□□□□□ -1.06
LDB3-203ENST00000372056 IMUPQ9GZP8 106 aa8.4□□□□□ -1.06
LDB3-203ENST00000372056 LOC107984640A0A0U1RRK4 108 aa8.4□□□□□ -1.07
LDB3-203ENST00000372056 M0R378 163 aa8.4□□□□□ -1.07
LDB3-203ENST00000372056 LINC00167Q96N53 147 aa8.4□□□□□ -1.07
LDB3-203ENST00000372056 TRAV23DV6A0A075B6W5 121 aa8.39□□□□□ -1.07
LDB3-203ENST00000372056 Q8N814 137 aa8.39□□□□□ -1.07
LDB3-203ENST00000372056 LINC00575Q6W349 94 aa8.38□□□□□ -1.07
LDB3-203ENST00000372056 SDIM1Q6ZPB5 146 aa8.38□□□□□ -1.07
LDB3-203ENST00000372056 A0A087WTM6 91 aa8.37□□□□□ -1.07
LDB3-203ENST00000372056 LINC00474Q9P2X8 69 aa8.37□□□□□ -1.07
LDB3-203ENST00000372056 PLA2G2DQ9UNK4 145 aa8.37□□□□□ -1.07
LDB3-203ENST00000372056 PLECQ15149 4684 aaKnown RBP8.37□□□□□ -1.07
LDB3-203ENST00000372056 ZNF73O43830 326 aaPredicted RBP8.36□□□□□ -1.07
LDB3-203ENST00000372056 DIRC1Q969H9 104 aa8.36□□□□□ -1.07
LDB3-203ENST00000372056 ORMDL1Q9P0S3 153 aa8.36□□□□□ -1.07
LDB3-203ENST00000372056 LCE6AA0A183 80 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms