RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 GAGE2BQ13066 116 aa8.37□□□□□ -1.07
TTC39A-204ENST00000371750 TMEM238LA0A1B0GVL6 79 aa8.36□□□□□ -1.07
TTC39A-204ENST00000371750 GAGE2EQ4V326 116 aa8.36□□□□□ -1.07
TTC39A-204ENST00000371750 RAB37Q96AX2 223 aa8.36□□□□□ -1.07
TTC39A-204ENST00000371750 NAA38Q9BRA0 125 aaKnown RBP8.36□□□□□ -1.07
TTC39A-204ENST00000371750 GAGE2DQ9UEU5 116 aa8.36□□□□□ -1.07
TTC39A-204ENST00000371750 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
TTC39A-204ENST00000371750 H3BUT2 72 aa8.36□□□□□ -1.07
TTC39A-204ENST00000371750 K7ERJ3 54 aa8.36□□□□□ -1.07
TTC39A-204ENST00000371750 LINC00158P58513 81 aa8.36□□□□□ -1.07
TTC39A-204ENST00000371750 PKIGQ9Y2B9 76 aa8.36□□□□□ -1.07
TTC39A-204ENST00000371750 COX17Q14061 63 aa8.34□□□□□ -1.07
TTC39A-204ENST00000371750 SCGB1D4Q6XE38 83 aa8.34□□□□□ -1.07
TTC39A-204ENST00000371750 DAND5Q8N907 189 aa8.34□□□□□ -1.07
TTC39A-204ENST00000371750 HIST1H4GQ99525 98 aa8.34□□□□□ -1.07
TTC39A-204ENST00000371750 XAGE1AQ9HD64 81 aa8.34□□□□□ -1.07
TTC39A-204ENST00000371750 NHP2Q9NX24 153 aaKnown RBP8.34□□□□□ -1.07
TTC39A-204ENST00000371750 FAM30AQ9NZY2 134 aa8.34□□□□□ -1.07
TTC39A-204ENST00000371750 LITAFQ99732 161 aa8.34□□□□□ -1.07
TTC39A-204ENST00000371750 APOBP04114 4563 aaKnown RBP8.33□□□□□ -1.08
TTC39A-204ENST00000371750 C9orf129Q5T035 196 aaKnown RBP8.33□□□□□ -1.08
TTC39A-204ENST00000371750 MIR7-3HGQ8N6C7 128 aa8.33□□□□□ -1.08
TTC39A-204ENST00000371750 SPACA4Q8TDM5 124 aa8.33□□□□□ -1.08
TTC39A-204ENST00000371750 A0A1W2PPM0 123 aa8.32□□□□□ -1.08
TTC39A-204ENST00000371750 ADAMTSL4-AS1Q5T5F5 129 aa8.32□□□□□ -1.08
TTC39A-204ENST00000371750 Q6ZSA8 131 aa8.32□□□□□ -1.08
TTC39A-204ENST00000371750 SND1-IT1Q9HBX3 110 aa8.32□□□□□ -1.08
TTC39A-204ENST00000371750 K7EP34 96 aa8.32□□□□□ -1.08
TTC39A-204ENST00000371750 HAMPP81172 84 aa8.32□□□□□ -1.08
TTC39A-204ENST00000371750 CIRBPQ14011 172 aaKnown RBP8.32□□□□□ -1.08
TTC39A-204ENST00000371750 GAGE10A6NGK3 116 aa8.31□□□□□ -1.08
TTC39A-204ENST00000371750 TIMM17BO60830 172 aa8.31□□□□□ -1.08
TTC39A-204ENST00000371750 A0A1B0GWB2 263 aa8.3□□□□□ -1.08
TTC39A-204ENST00000371750 NPC2P61916 151 aa8.3□□□□□ -1.08
TTC39A-204ENST00000371750 FAM168BA1KXE4 195 aa8.3□□□□□ -1.08
TTC39A-204ENST00000371750 GTF2H5Q6ZYL4 71 aa8.3□□□□□ -1.08
TTC39A-204ENST00000371750 TMEM238C9JI98 176 aa8.29□□□□□ -1.08
TTC39A-204ENST00000371750 LINC00474Q9P2X8 69 aa8.29□□□□□ -1.08
TTC39A-204ENST00000371750 FABP2P12104 132 aa8.29□□□□□ -1.08
TTC39A-204ENST00000371750 SCXQ7RTU7 201 aa8.29□□□□□ -1.08
TTC39A-204ENST00000371750 SPCS1Q9Y6A9 102 aa8.29□□□□□ -1.08
TTC39A-204ENST00000371750 A0A087WYN8 130 aa8.28□□□□□ -1.08
TTC39A-204ENST00000371750 EIF4EBP3O60516 100 aaPredicted RBP8.28□□□□□ -1.08
TTC39A-204ENST00000371750 SOSTDC1Q6X4U4 206 aa8.28□□□□□ -1.08
TTC39A-204ENST00000371750 FAM19A5Q7Z5A7 132 aaPredicted RBP8.28□□□□□ -1.08
TTC39A-204ENST00000371750 A0A1W2PNN7 141 aa8.27□□□□□ -1.09
TTC39A-204ENST00000371750 SERTAD4-AS1Q5TG53 156 aa8.27□□□□□ -1.09
TTC39A-204ENST00000371750 KRTAP7-1Q8IUC3 87 aa8.27□□□□□ -1.09
TTC39A-204ENST00000371750 Q8NDZ9 215 aa8.27□□□□□ -1.09
TTC39A-204ENST00000371750 SPANXDQ9BXN6 97 aa8.27□□□□□ -1.09
TTC39A-204ENST00000371750 SPANXB1Q9NS25 103 aaPredicted RBP8.27□□□□□ -1.09
TTC39A-204ENST00000371750 SPANXCQ9NY87 97 aa8.27□□□□□ -1.09
TTC39A-204ENST00000371750 CIRBP-AS1Q8TBR5 109 aa8.27□□□□□ -1.09
TTC39A-204ENST00000371750 DPH3Q96FX2 82 aa8.27□□□□□ -1.09
TTC39A-204ENST00000371750 SRSF9Q13242 221 aaKnown RBP eCLIP8.26□□□□□ -1.09
TTC39A-204ENST00000371750 BIRC6Q9NR09 4857 aa8.26□□□□□ -1.09
TTC39A-204ENST00000371750 A6NJY4 79 aa8.25□□□□□ -1.09
TTC39A-204ENST00000371750 LINC00308Q8TCZ7 52 aa8.25□□□□□ -1.09
TTC39A-204ENST00000371750 PLAC8Q9NZF1 115 aa8.25□□□□□ -1.09
TTC39A-204ENST00000371750 XGP55808 180 aa8.24□□□□□ -1.09
TTC39A-204ENST00000371750 LOC107984156A0A0G2JMH3 177 aa8.24□□□□□ -1.09
TTC39A-204ENST00000371750 VPREB1P12018 145 aa8.24□□□□□ -1.09
TTC39A-204ENST00000371750 ARL17AQ8IVW1 177 aa8.24□□□□□ -1.09
TTC39A-204ENST00000371750 M0QXV9 152 aa8.23□□□□□ -1.09
TTC39A-204ENST00000371750 PLA2G2DQ9UNK4 145 aa8.23□□□□□ -1.09
TTC39A-204ENST00000371750 RYR1P21817 5038 aa8.23□□□□□ -1.09
TTC39A-204ENST00000371750 EPM2AB3EWF7 344 aa8.22□□□□□ -1.09
TTC39A-204ENST00000371750 NCR3O14931 201 aa8.22□□□□□ -1.09
TTC39A-204ENST00000371750 OCIAD2Q56VL3 154 aa8.22□□□□□ -1.09
TTC39A-204ENST00000371750 PHF5AQ7RTV0 110 aaKnown RBP8.22□□□□□ -1.09
TTC39A-204ENST00000371750 MUSTN1Q8IVN3 82 aa8.22□□□□□ -1.09
TTC39A-204ENST00000371750 KIAA1109Q2LD37 5005 aa8.22□□□□□ -1.09
TTC39A-204ENST00000371750 IGLV5-37A0A075B6J1 123 aa8.21□□□□□ -1.1
TTC39A-204ENST00000371750 HSPG2P98160 4391 aa8.21□□□□□ -1.1
TTC39A-204ENST00000371750 CDK2AP2O75956 126 aa8.2□□□□□ -1.1
TTC39A-204ENST00000371750 IFITM1P13164 125 aa8.2□□□□□ -1.1
TTC39A-204ENST00000371750 PRR3P79522 188 aaKnown RBP8.2□□□□□ -1.1
TTC39A-204ENST00000371750 RPL24P83731 157 aaKnown RBP8.2□□□□□ -1.1
TTC39A-204ENST00000371750 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
TTC39A-204ENST00000371750 C22orf24Q9Y442 160 aa8.2□□□□□ -1.1
TTC39A-204ENST00000371750 TSPAN13O95857 204 aa8.2□□□□□ -1.1
TTC39A-204ENST00000371750 CFC1BP0CG36 223 aa8.2□□□□□ -1.1
TTC39A-204ENST00000371750 CFC1P0CG37 223 aa8.2□□□□□ -1.1
TTC39A-204ENST00000371750 MRPL55Q7Z7F7 128 aaKnown RBP8.19□□□□□ -1.1
TTC39A-204ENST00000371750 C7orf33Q8WU49 177 aa8.19□□□□□ -1.1
TTC39A-204ENST00000371750 COPS9Q8WXC6 57 aa8.19□□□□□ -1.1
TTC39A-204ENST00000371750 PPDPFQ9H3Y8 114 aa8.19□□□□□ -1.1
TTC39A-204ENST00000371750 NDUFC2O95298 119 aa8.18□□□□□ -1.1
TTC39A-204ENST00000371750 IGKV2-28A0A075B6P5 120 aa8.17□□□□□ -1.1
TTC39A-204ENST00000371750 A4D1N5 150 aa8.17□□□□□ -1.1
TTC39A-204ENST00000371750 H3BMG7 143 aa8.17□□□□□ -1.1
TTC39A-204ENST00000371750 IGKV2D-28P01615 120 aa8.17□□□□□ -1.1
TTC39A-204ENST00000371750 KRTAP11-1Q8IUC1 163 aa8.17□□□□□ -1.1
TTC39A-204ENST00000371750 SMR3BP02814 79 aaPredicted RBP8.16□□□□□ -1.1
TTC39A-204ENST00000371750 LINC00167Q96N53 147 aa8.16□□□□□ -1.1
TTC39A-204ENST00000371750 M0R378 163 aa8.15□□□□□ -1.1
TTC39A-204ENST00000371750 FAT1Q14517 4588 aa8.15□□□□□ -1.1
TTC39A-204ENST00000371750 RPL37AP8A6NKH3 93 aa8.15□□□□□ -1.11
TTC39A-204ENST00000371750 UBE2BP63146 152 aa8.15□□□□□ -1.11
TTC39A-204ENST00000371750 PRO1854Q9UHT4 67 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms