RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 CXCL5P42830 114 aa13.39□□□□□ -0.27
LHX3-202ENST00000371748 SMIM11BQ8TCY0 68 aa13.39□□□□□ -0.27
LHX3-202ENST00000371748 LINC00526Q96FQ7 95 aa13.39□□□□□ -0.27
LHX3-202ENST00000371748 A0A087WYN8 130 aa13.38□□□□□ -0.27
LHX3-202ENST00000371748 C9orf116Q5BN46 136 aaPredicted RBP13.38□□□□□ -0.27
LHX3-202ENST00000371748 GAGE2AQ6NT46 116 aa13.38□□□□□ -0.27
LHX3-202ENST00000371748 C6orf223Q8N319 242 aa13.38□□□□□ -0.27
LHX3-202ENST00000371748 SPAG11BQ08648 103 aa13.37□□□□□ -0.27
LHX3-202ENST00000371748 C9orf129Q5T035 196 aaKnown RBP13.37□□□□□ -0.27
LHX3-202ENST00000371748 KLK5Q9Y337 293 aaPredicted RBP13.37□□□□□ -0.27
LHX3-202ENST00000371748 HUWE1Q7Z6Z7 4374 aaKnown RBP13.36□□□□□ -0.27
LHX3-202ENST00000371748 TM2D3Q9BRN9 247 aa13.36□□□□□ -0.27
LHX3-202ENST00000371748 C10orf25Q5T742 122 aa13.35□□□□□ -0.27
LHX3-202ENST00000371748 UNQ6190/PRO20217Q6UXQ8 127 aa13.34□□□□□ -0.27
LHX3-202ENST00000371748 TMEM126AQ9H061 195 aa13.34□□□□□ -0.27
LHX3-202ENST00000371748 DNAL4O96015 105 aa13.34□□□□□ -0.27
LHX3-202ENST00000371748 MGAM2Q2M2H8 2515 aa13.33□□□□□ -0.28
LHX3-202ENST00000371748 COX17Q14061 63 aa13.32□□□□□ -0.28
LHX3-202ENST00000371748 C3orf22Q8N5N4 141 aa13.32□□□□□ -0.28
LHX3-202ENST00000371748 H0YGX0 51 aa13.31□□□□□ -0.28
LHX3-202ENST00000371748 OBSCN-AS1Q96MR7 158 aa13.31□□□□□ -0.28
LHX3-202ENST00000371748 OR13C6PQ8NH95 151 aa13.31□□□□□ -0.28
LHX3-202ENST00000371748 C14orf132Q9NPU4 83 aa13.31□□□□□ -0.28
LHX3-202ENST00000371748 UQCRQO14949 82 aa13.3□□□□□ -0.28
LHX3-202ENST00000371748 PRR3P79522 188 aaKnown RBP13.29□□□□□ -0.28
LHX3-202ENST00000371748 TRAV10A0A0B4J240 114 aa13.29□□□□□ -0.28
LHX3-202ENST00000371748 HIST1H4AP62805 103 aaKnown RBP13.29□□□□□ -0.28
LHX3-202ENST00000371748 C9orf153Q5TBE3 101 aa13.29□□□□□ -0.28
LHX3-202ENST00000371748 MDFIQ99750 246 aa13.29□□□□□ -0.28
LHX3-202ENST00000371748 LECT2O14960 151 aa13.28□□□□□ -0.28
LHX3-202ENST00000371748 KRTAP26-1Q6PEX3 210 aa13.28□□□□□ -0.28
LHX3-202ENST00000371748 LINC01556Q5JQF7 62 aa13.27□□□□□ -0.29
LHX3-202ENST00000371748 HIGD2BQ4VC39 106 aa13.25□□□□□ -0.29
LHX3-202ENST00000371748 C2orf48Q96LS8 159 aa13.25□□□□□ -0.29
LHX3-202ENST00000371748 LINC00846Q9NV44 126 aa13.25□□□□□ -0.29
LHX3-202ENST00000371748 Q8NDZ9 215 aa13.24□□□□□ -0.29
LHX3-202ENST00000371748 NCR3O14931 201 aa13.23□□□□□ -0.29
LHX3-202ENST00000371748 SLPIP03973 132 aa13.23□□□□□ -0.29
LHX3-202ENST00000371748 COX7CP15954 63 aa13.23□□□□□ -0.29
LHX3-202ENST00000371748 C6orf48Q9UBA6 75 aa13.23□□□□□ -0.29
LHX3-202ENST00000371748 NDUFC2O95298 119 aa13.23□□□□□ -0.29
LHX3-202ENST00000371748 C1orf43Q9BWL3 253 aa13.22□□□□□ -0.29
LHX3-202ENST00000371748 IGKV2D-24A0A075B6R9 120 aa13.22□□□□□ -0.29
LHX3-202ENST00000371748 ZNF561-AS1K7EIQ3 104 aa13.22□□□□□ -0.29
LHX3-202ENST00000371748 LINC00588Q9Y4M8 146 aa13.21□□□□□ -0.29
LHX3-202ENST00000371748 C15orf56Q8N910 161 aa13.2□□□□□ -0.3
LHX3-202ENST00000371748 GVQW2A0A096LPI5 108 aaPredicted RBP13.2□□□□□ -0.3
LHX3-202ENST00000371748 IGKV3D-7A0A0C4DH55 119 aa13.2□□□□□ -0.3
LHX3-202ENST00000371748 ATOX1O00244 68 aa13.2□□□□□ -0.3
LHX3-202ENST00000371748 DNAH10OSP0CZ25 163 aa13.2□□□□□ -0.3
LHX3-202ENST00000371748 Q6JHZ5 121 aa13.2□□□□□ -0.3
LHX3-202ENST00000371748 CAMK2N2Q96S95 79 aa13.18□□□□□ -0.3
LHX3-202ENST00000371748 ORMDL1Q9P0S3 153 aa13.18□□□□□ -0.3
LHX3-202ENST00000371748 CRYGAP11844 174 aa13.17□□□□□ -0.3
LHX3-202ENST00000371748 RPL18AQ02543 176 aaKnown RBP13.17□□□□□ -0.3
LHX3-202ENST00000371748 MUC7Q8TAX7 377 aa13.16□□□□□ -0.3
LHX3-202ENST00000371748 COL7A1Q02388 2944 aa13.16□□□□□ -0.3
LHX3-202ENST00000371748 Q6ZRU5 148 aa13.15□□□□□ -0.3
LHX3-202ENST00000371748 XAGE1AQ9HD64 81 aa13.15□□□□□ -0.3
LHX3-202ENST00000371748 A0A087WVE0 104 aa13.15□□□□□ -0.3
LHX3-202ENST00000371748 LINC00167Q96N53 147 aa13.15□□□□□ -0.3
LHX3-202ENST00000371748 DNAH9Q9NYC9 4486 aa13.14□□□□□ -0.31
LHX3-202ENST00000371748 CCKP06307 115 aa13.13□□□□□ -0.31
LHX3-202ENST00000371748 S100A7L2Q5SY68 101 aa13.13□□□□□ -0.31
LHX3-202ENST00000371748 CYSTM1Q9H1C7 97 aa13.12□□□□□ -0.31
LHX3-202ENST00000371748 A0A1B0GX51 115 aa13.12□□□□□ -0.31
LHX3-202ENST00000371748 Q8N814 137 aa13.12□□□□□ -0.31
LHX3-202ENST00000371748 hADV29S1A0JD25 119 aa13.1□□□□□ -0.31
LHX3-202ENST00000371748 DNAH1Q9P2D7 4330 aa13.09□□□□□ -0.31
LHX3-202ENST00000371748 STAB2Q8WWQ8 2551 aa13.09□□□□□ -0.31
LHX3-202ENST00000371748 C6orf99Q4VX62 202 aa13.08□□□□□ -0.32
LHX3-202ENST00000371748 LOC107984640A0A0U1RRK4 108 aa13.07□□□□□ -0.32
LHX3-202ENST00000371748 USP17L23D6RBM5 183 aa13.07□□□□□ -0.32
LHX3-202ENST00000371748 SERP2Q8N6R1 65 aa13.07□□□□□ -0.32
LHX3-202ENST00000371748 LYSTQ99698 3801 aa13.07□□□□□ -0.32
LHX3-202ENST00000371748 JMJD7-PLA2G4BH0Y9G9 81 aa13.07□□□□□ -0.32
LHX3-202ENST00000371748 CASC10Q5T4H9 136 aa13.06□□□□□ -0.32
LHX3-202ENST00000371748 TMEM256-PLSCR3K7ERE1 68 aa13.06□□□□□ -0.32
LHX3-202ENST00000371748 UPK3BQ9BT76 320 aa13.06□□□□□ -0.32
LHX3-202ENST00000371748 NDUFC2-KCTD14E9PQ53 114 aa13.05□□□□□ -0.32
LHX3-202ENST00000371748 IGLV6-57P01721 117 aa13.05□□□□□ -0.32
LHX3-202ENST00000371748 SYCNQ0VAF6 134 aa13.04□□□□□ -0.32
LHX3-202ENST00000371748 Q6ZRP5 223 aa13.03□□□□□ -0.32
LHX3-202ENST00000371748 TRBV10-3A0A0K0K1G6 114 aa13.02□□□□□ -0.32
LHX3-202ENST00000371748 B9D2Q9BPU9 175 aa13.02□□□□□ -0.32
LHX3-202ENST00000371748 J3KT08 172 aa13.01□□□□□ -0.33
LHX3-202ENST00000371748 VPREB1P12018 145 aa13.01□□□□□ -0.33
LHX3-202ENST00000371748 F8WDY8 70 aa13□□□□□ -0.33
LHX3-202ENST00000371748 ATP5EP2Q5VTU8 51 aa12.99□□□□□ -0.33
LHX3-202ENST00000371748 RMI2Q96E14 147 aa12.98□□□□□ -0.33
LHX3-202ENST00000371748 TRAV23DV6A0A075B6W5 121 aa12.97□□□□□ -0.33
LHX3-202ENST00000371748 RPS28P62857 69 aaKnown RBP12.97□□□□□ -0.33
LHX3-202ENST00000371748 LINC00575Q6W349 94 aa12.96□□□□□ -0.33
LHX3-202ENST00000371748 TMEM258P61165 79 aa12.96□□□□□ -0.33
LHX3-202ENST00000371748 FAM19A1Q7Z5A9 133 aa12.96□□□□□ -0.33
LHX3-202ENST00000371748 CSMD3Q7Z407 3707 aa12.95□□□□□ -0.34
LHX3-202ENST00000371748 FAM19A5Q7Z5A7 132 aaPredicted RBP12.94□□□□□ -0.34
LHX3-202ENST00000371748 KRTAP1-5Q9BYS1 174 aa12.94□□□□□ -0.34
LHX3-202ENST00000371748 APLNQ9ULZ1 77 aa12.94□□□□□ -0.34
LHX3-202ENST00000371748 M0R378 163 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms