RNA–Protein interactions for RNA: ENST00000370985.3

GADD45A-201, Transcript of growth arrest and DNA damage inducible alpha, humanhuman

TSL 1 (best) BASIC

Gene GADD45A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45A-201ENST00000370985 A0A0U1RRA0 63 aa12.57□□□□□ -0.4
GADD45A-201ENST00000370985 COX17Q14061 63 aa12.57□□□□□ -0.4
GADD45A-201ENST00000370985 FAM19A1Q7Z5A9 133 aa12.57□□□□□ -0.4
GADD45A-201ENST00000370985 RPL24P83731 157 aaKnown RBP12.56□□□□□ -0.4
GADD45A-201ENST00000370985 TMEM126AQ9H061 195 aa12.56□□□□□ -0.4
GADD45A-201ENST00000370985 LINC00158P58513 81 aa12.55□□□□□ -0.4
GADD45A-201ENST00000370985 MUC2Q02817 5179 aa12.54□□□□□ -0.4
GADD45A-201ENST00000370985 M0R378 163 aa12.54□□□□□ -0.4
GADD45A-201ENST00000370985 IFI27L1Q96BM0 104 aa12.53□□□□□ -0.4
GADD45A-201ENST00000370985 TMEM223A0PJW6 202 aa12.52□□□□□ -0.41
GADD45A-201ENST00000370985 COLCA2A8K830 154 aa12.5□□□□□ -0.41
GADD45A-201ENST00000370985 FAM229BQ4G0N7 80 aa12.5□□□□□ -0.41
GADD45A-201ENST00000370985 FAM19A2Q8N3H0 131 aa12.5□□□□□ -0.41
GADD45A-201ENST00000370985 CHCHD1Q96BP2 118 aaKnown RBP12.5□□□□□ -0.41
GADD45A-201ENST00000370985 RETNLBQ9BQ08 111 aa12.5□□□□□ -0.41
GADD45A-201ENST00000370985 TRAV12-1A0A0B4J245 112 aa12.49□□□□□ -0.41
GADD45A-201ENST00000370985 SFTA2Q6UW10 78 aa12.49□□□□□ -0.41
GADD45A-201ENST00000370985 SMIM13P0DJ93 91 aa12.48□□□□□ -0.41
GADD45A-201ENST00000370985 PLEKHB2Q96CS7 222 aa12.48□□□□□ -0.41
GADD45A-201ENST00000370985 IGKV2D-26A0A0A0MRZ7 120 aa12.47□□□□□ -0.41
GADD45A-201ENST00000370985 LINC00304Q8N9R0 145 aa12.47□□□□□ -0.41
GADD45A-201ENST00000370985 HIGD2AQ9BW72 106 aa12.46□□□□□ -0.41
GADD45A-201ENST00000370985 C3orf22Q8N5N4 141 aa12.45□□□□□ -0.42
GADD45A-201ENST00000370985 H0Y8G0 127 aa12.44□□□□□ -0.42
GADD45A-201ENST00000370985 MEIG1Q5JSS6 88 aa12.44□□□□□ -0.42
GADD45A-201ENST00000370985 BOD1L2Q8IYS8 172 aa12.43□□□□□ -0.42
GADD45A-201ENST00000370985 NCR3O14931 201 aa12.42□□□□□ -0.42
GADD45A-201ENST00000370985 HSBP1O75506 76 aa12.42□□□□□ -0.42
GADD45A-201ENST00000370985 MIR7-3HGQ8N6C7 128 aa12.42□□□□□ -0.42
GADD45A-201ENST00000370985 TRGC2P03986 189 aa12.4□□□□□ -0.42
GADD45A-201ENST00000370985 NDUFA12Q9UI09 145 aa12.39□□□□□ -0.43
GADD45A-201ENST00000370985 LINC00310P59036 64 aa12.37□□□□□ -0.43
GADD45A-201ENST00000370985 TSPEAR-AS2P59090 65 aa12.37□□□□□ -0.43
GADD45A-201ENST00000370985 SPRR4Q96PI1 79 aa12.37□□□□□ -0.43
GADD45A-201ENST00000370985 SERF1AO75920 110 aa12.36□□□□□ -0.43
GADD45A-201ENST00000370985 HERV-K104P63124 156 aa12.36□□□□□ -0.43
GADD45A-201ENST00000370985 DAND5Q8N907 189 aa12.35□□□□□ -0.43
GADD45A-201ENST00000370985 MYMXA0A1B0GTQ4 84 aa12.34□□□□□ -0.43
GADD45A-201ENST00000370985 PRYO14603 147 aa12.34□□□□□ -0.43
GADD45A-201ENST00000370985 LEPROTL1O95214 131 aa12.34□□□□□ -0.43
GADD45A-201ENST00000370985 TRBV10-3A0A0K0K1G6 114 aa12.33□□□□□ -0.44
GADD45A-201ENST00000370985 PMCHL2Q9BQD1 86 aa12.33□□□□□ -0.44
GADD45A-201ENST00000370985 KCNQ1DNQ9H478 68 aa12.33□□□□□ -0.44
GADD45A-201ENST00000370985 IGLV7-46A0A075B6I9 117 aa12.32□□□□□ -0.44
GADD45A-201ENST00000370985 FABP4P15090 132 aa12.32□□□□□ -0.44
GADD45A-201ENST00000370985 SMCR5Q8TEV8 140 aa12.32□□□□□ -0.44
GADD45A-201ENST00000370985 PPDPFQ9H3Y8 114 aa12.32□□□□□ -0.44
GADD45A-201ENST00000370985 MUC17Q685J3 4493 aa12.32□□□□□ -0.44
GADD45A-201ENST00000370985 LEPROTO15243 131 aa12.31□□□□□ -0.44
GADD45A-201ENST00000370985 SPRR1AP35321 89 aa12.31□□□□□ -0.44
GADD45A-201ENST00000370985 LINC00587B1AMM8 73 aa12.3□□□□□ -0.44
GADD45A-201ENST00000370985 KRTAP4-16G5E9R7 235 aaPredicted RBP12.3□□□□□ -0.44
GADD45A-201ENST00000370985 LINC00337Q8N6G1 96 aa12.3□□□□□ -0.44
GADD45A-201ENST00000370985 ETDCA0A1B0GVM5 59 aa12.29□□□□□ -0.44
GADD45A-201ENST00000370985 MAP1LC3CQ9BXW4 147 aa12.29□□□□□ -0.44
GADD45A-201ENST00000370985 ZNF706Q9Y5V0 76 aaPredicted RBP12.28□□□□□ -0.44
GADD45A-201ENST00000370985 CDIP1Q9H305 208 aa12.27□□□□□ -0.45
GADD45A-201ENST00000370985 J3QQQ9 107 aa12.26□□□□□ -0.45
GADD45A-201ENST00000370985 PLNP26678 52 aa12.26□□□□□ -0.45
GADD45A-201ENST00000370985 HSPB8Q9UJY1 196 aa12.26□□□□□ -0.45
GADD45A-201ENST00000370985 DPM2O94777 84 aa12.25□□□□□ -0.45
GADD45A-201ENST00000370985 Q8NBF4 154 aa12.25□□□□□ -0.45
GADD45A-201ENST00000370985 ERC2-IT1O76042 136 aa12.24□□□□□ -0.45
GADD45A-201ENST00000370985 TPRXLQ17RH7 258 aa12.24□□□□□ -0.45
GADD45A-201ENST00000370985 SPAG11AQ6PDA7 123 aa12.24□□□□□ -0.45
GADD45A-201ENST00000370985 LOC107984156A0A0G2JMH3 177 aa12.23□□□□□ -0.45
GADD45A-201ENST00000370985 B5MCH6 92 aa12.23□□□□□ -0.45
GADD45A-201ENST00000370985 IGKCP01834 107 aa12.23□□□□□ -0.45
GADD45A-201ENST00000370985 DDTP30046 118 aa12.23□□□□□ -0.45
GADD45A-201ENST00000370985 CTAG1AP78358 180 aa12.23□□□□□ -0.45
GADD45A-201ENST00000370985 C4orf48Q5BLP8 95 aa12.23□□□□□ -0.45
GADD45A-201ENST00000370985 GAGE2AQ6NT46 116 aa12.23□□□□□ -0.45
GADD45A-201ENST00000370985 ARL17AQ8IVW1 177 aa12.23□□□□□ -0.45
GADD45A-201ENST00000370985 HIST1H2BKO60814 126 aa12.22□□□□□ -0.45
GADD45A-201ENST00000370985 HIST1H2BJP06899 126 aa12.22□□□□□ -0.45
GADD45A-201ENST00000370985 LGALS3P17931 250 aaKnown RBP12.22□□□□□ -0.45
GADD45A-201ENST00000370985 HIST1H2BOP23527 126 aa12.22□□□□□ -0.45
GADD45A-201ENST00000370985 HIST1H2BBP33778 126 aa12.22□□□□□ -0.45
GADD45A-201ENST00000370985 HIST1H2BDP58876 126 aa12.22□□□□□ -0.45
GADD45A-201ENST00000370985 HIST1H2BCP62807 126 aa12.22□□□□□ -0.45
GADD45A-201ENST00000370985 HIST2H2BEQ16778 126 aa12.22□□□□□ -0.45
GADD45A-201ENST00000370985 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.22□□□□□ -0.45
GADD45A-201ENST00000370985 HIST1H2BHQ93079 126 aa12.22□□□□□ -0.45
GADD45A-201ENST00000370985 HIST1H2BNQ99877 126 aa12.22□□□□□ -0.45
GADD45A-201ENST00000370985 HIST1H2BMQ99879 126 aa12.22□□□□□ -0.45
GADD45A-201ENST00000370985 HERVK_113P61574 105 aa12.21□□□□□ -0.45
GADD45A-201ENST00000370985 FAT4Q6V0I7 4981 aa12.2□□□□□ -0.46
GADD45A-201ENST00000370985 EIF4EBP3O60516 100 aaPredicted RBP12.2□□□□□ -0.46
GADD45A-201ENST00000370985 NPC2P61916 151 aa12.2□□□□□ -0.46
GADD45A-201ENST00000370985 TRBV10-2A0A0K0K1G8 114 aa12.19□□□□□ -0.46
GADD45A-201ENST00000370985 A0A0U1RQV1 116 aa12.19□□□□□ -0.46
GADD45A-201ENST00000370985 S100A12P80511 92 aa12.19□□□□□ -0.46
GADD45A-201ENST00000370985 LINC00483Q53H64 154 aa12.19□□□□□ -0.46
GADD45A-201ENST00000370985 Q9BRP9 147 aa12.19□□□□□ -0.46
GADD45A-201ENST00000370985 NMUP48645 174 aa12.18□□□□□ -0.46
GADD45A-201ENST00000370985 ADAMTSL4-AS1Q5T5F5 129 aa12.18□□□□□ -0.46
GADD45A-201ENST00000370985 SOSTDC1Q6X4U4 206 aa12.18□□□□□ -0.46
GADD45A-201ENST00000370985 MIEN1Q9BRT3 115 aa12.17□□□□□ -0.46
GADD45A-201ENST00000370985 SPANXB1Q9NS25 103 aaPredicted RBP12.17□□□□□ -0.46
GADD45A-201ENST00000370985 IGLV9-49A0A0B4J1Y8 123 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms