RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 SYS1-DBNDD2H3BUS1 97 aa9.24□□□□□ -0.93
SS18L1-202ENST00000370848 Q8NDZ9 215 aa9.24□□□□□ -0.93
SS18L1-202ENST00000370848 IGLV7-43P04211 117 aa9.23□□□□□ -0.93
SS18L1-202ENST00000370848 LINC00158P58513 81 aa9.23□□□□□ -0.93
SS18L1-202ENST00000370848 SFTA2Q6UW10 78 aa9.23□□□□□ -0.93
SS18L1-202ENST00000370848 MRPL55Q7Z7F7 128 aaKnown RBP9.23□□□□□ -0.93
SS18L1-202ENST00000370848 NDUFA12Q9UI09 145 aa9.23□□□□□ -0.93
SS18L1-202ENST00000370848 IGLV5-37A0A075B6J1 123 aa9.22□□□□□ -0.93
SS18L1-202ENST00000370848 LEPROTO15243 131 aa9.22□□□□□ -0.93
SS18L1-202ENST00000370848 SMIM13P0DJ93 91 aa9.22□□□□□ -0.93
SS18L1-202ENST00000370848 COX17Q14061 63 aa9.22□□□□□ -0.93
SS18L1-202ENST00000370848 LINC00167Q96N53 147 aa9.22□□□□□ -0.93
SS18L1-202ENST00000370848 TP73-AS1Q9UF72 201 aa9.22□□□□□ -0.93
SS18L1-202ENST00000370848 RPL37AP8A6NKH3 93 aa9.21□□□□□ -0.94
SS18L1-202ENST00000370848 C3orf79P0CE67 100 aa9.21□□□□□ -0.94
SS18L1-202ENST00000370848 VPREB1P12018 145 aa9.21□□□□□ -0.94
SS18L1-202ENST00000370848 LBHQ53QV2 105 aaPredicted RBP9.21□□□□□ -0.94
SS18L1-202ENST00000370848 MEIG1Q5JSS6 88 aa9.21□□□□□ -0.94
SS18L1-202ENST00000370848 HERVK_113P61574 105 aa9.2□□□□□ -0.94
SS18L1-202ENST00000370848 LINC01545Q5VT33 79 aa9.2□□□□□ -0.94
SS18L1-202ENST00000370848 PLEKHB2Q96CS7 222 aa9.2□□□□□ -0.94
SS18L1-202ENST00000370848 MYMXA0A1B0GTQ4 84 aa9.19□□□□□ -0.94
SS18L1-202ENST00000370848 J3QQQ9 107 aa9.19□□□□□ -0.94
SS18L1-202ENST00000370848 PET117Q6UWS5 81 aa9.19□□□□□ -0.94
SS18L1-202ENST00000370848 NKAPP1Q8N9T2 125 aa9.19□□□□□ -0.94
SS18L1-202ENST00000370848 KRTDAPP60985 99 aa9.18□□□□□ -0.94
SS18L1-202ENST00000370848 HERV-K104P63124 156 aa9.18□□□□□ -0.94
SS18L1-202ENST00000370848 MIR7-3HGQ8N6C7 128 aa9.18□□□□□ -0.94
SS18L1-202ENST00000370848 LGALS3P17931 250 aaKnown RBP9.17□□□□□ -0.94
SS18L1-202ENST00000370848 IGKV2-28A0A075B6P5 120 aa9.16□□□□□ -0.94
SS18L1-202ENST00000370848 E9PLD3 99 aa9.16□□□□□ -0.94
SS18L1-202ENST00000370848 IGKV2D-28P01615 120 aa9.16□□□□□ -0.94
SS18L1-202ENST00000370848 DAND5Q8N907 189 aa9.16□□□□□ -0.94
SS18L1-202ENST00000370848 H0Y9J4 135 aa9.14□□□□□ -0.95
SS18L1-202ENST00000370848 RPL24P83731 157 aaKnown RBP9.14□□□□□ -0.95
SS18L1-202ENST00000370848 LPAP08519 4548 aa9.13□□□□□ -0.95
SS18L1-202ENST00000370848 BCE1O60756 84 aa9.13□□□□□ -0.95
SS18L1-202ENST00000370848 NMUP48645 174 aa9.13□□□□□ -0.95
SS18L1-202ENST00000370848 BOD1L2Q8IYS8 172 aa9.13□□□□□ -0.95
SS18L1-202ENST00000370848 HIST3H2BBQ8N257 126 aa9.13□□□□□ -0.95
SS18L1-202ENST00000370848 DIRC1Q969H9 104 aa9.13□□□□□ -0.95
SS18L1-202ENST00000370848 IGLV1-50A0A075B6I6 118 aa9.12□□□□□ -0.95
SS18L1-202ENST00000370848 IGKV2D-26A0A0A0MRZ7 120 aa9.12□□□□□ -0.95
SS18L1-202ENST00000370848 TMEM238C9JI98 176 aa9.12□□□□□ -0.95
SS18L1-202ENST00000370848 ZNF861PO60384 105 aa9.12□□□□□ -0.95
SS18L1-202ENST00000370848 TTTY13Q9BZ97 58 aa9.12□□□□□ -0.95
SS18L1-202ENST00000370848 A0A0J9YXY3 114 aa9.11□□□□□ -0.95
SS18L1-202ENST00000370848 NCR3O14931 201 aa9.11□□□□□ -0.95
SS18L1-202ENST00000370848 ATOH7Q8N100 152 aa9.11□□□□□ -0.95
SS18L1-202ENST00000370848 LINC00587B1AMM8 73 aa9.1□□□□□ -0.95
SS18L1-202ENST00000370848 HIST1H2BLQ99880 126 aa9.1□□□□□ -0.95
SS18L1-202ENST00000370848 KRTAP1-4P0C5Y4 121 aa9.09□□□□□ -0.95
SS18L1-202ENST00000370848 ADAMTSL4-AS1Q5T5F5 129 aa9.09□□□□□ -0.95
SS18L1-202ENST00000370848 C20orf202A1L168 122 aa9.08□□□□□ -0.96
SS18L1-202ENST00000370848 M0R378 163 aa9.08□□□□□ -0.96
SS18L1-202ENST00000370848 EIF4EBP3O60516 100 aaPredicted RBP9.08□□□□□ -0.96
SS18L1-202ENST00000370848 NPC2P61916 151 aa9.08□□□□□ -0.96
SS18L1-202ENST00000370848 ANKRD39Q53RE8 183 aa9.08□□□□□ -0.96
SS18L1-202ENST00000370848 SOSTDC1Q6X4U4 206 aa9.08□□□□□ -0.96
SS18L1-202ENST00000370848 KRTAP13-1Q8IUC0 172 aa9.08□□□□□ -0.96
SS18L1-202ENST00000370848 TMEM126AQ9H061 195 aa9.08□□□□□ -0.96
SS18L1-202ENST00000370848 S100A2P29034 98 aa9.07□□□□□ -0.96
SS18L1-202ENST00000370848 PRLHP81277 87 aa9.07□□□□□ -0.96
SS18L1-202ENST00000370848 PRR26Q8N8Z3 221 aa9.07□□□□□ -0.96
SS18L1-202ENST00000370848 ZNF815PA8K554 130 aa9.06□□□□□ -0.96
SS18L1-202ENST00000370848 S100A6P06703 90 aa9.06□□□□□ -0.96
SS18L1-202ENST00000370848 RPL28P46779 137 aaKnown RBP9.06□□□□□ -0.96
SS18L1-202ENST00000370848 UBE2AP49459 152 aa9.06□□□□□ -0.96
SS18L1-202ENST00000370848 LITAFQ99732 161 aa9.06□□□□□ -0.96
SS18L1-202ENST00000370848 LOC107984156A0A0G2JMH3 177 aa9.05□□□□□ -0.96
SS18L1-202ENST00000370848 SNRPEP62304 92 aaKnown RBP9.05□□□□□ -0.96
SS18L1-202ENST00000370848 FAM19A1Q7Z5A9 133 aa9.05□□□□□ -0.96
SS18L1-202ENST00000370848 ARL17AQ8IVW1 177 aa9.05□□□□□ -0.96
SS18L1-202ENST00000370848 AKR1D1P51857 326 aa9.04□□□□□ -0.96
SS18L1-202ENST00000370848 TRBV10-3A0A0K0K1G6 114 aa9.03□□□□□ -0.96
SS18L1-202ENST00000370848 MIEN1Q9BRT3 115 aa9.02□□□□□ -0.97
SS18L1-202ENST00000370848 PCP2Q8IVA1 136 aa9.01□□□□□ -0.97
SS18L1-202ENST00000370848 ANAPC11Q9NYG5 84 aa9.01□□□□□ -0.97
SS18L1-202ENST00000370848 C5orf52A6NGY3 159 aa9□□□□□ -0.97
SS18L1-202ENST00000370848 PRYO14603 147 aa9□□□□□ -0.97
SS18L1-202ENST00000370848 TIMM17BO60830 172 aa9□□□□□ -0.97
SS18L1-202ENST00000370848 SPANXB1Q9NS25 103 aaPredicted RBP9□□□□□ -0.97
SS18L1-202ENST00000370848 LINC00308Q8TCZ7 52 aa8.99□□□□□ -0.97
SS18L1-202ENST00000370848 KCNQ1DNQ9H478 68 aa8.99□□□□□ -0.97
SS18L1-202ENST00000370848 MUC2Q02817 5179 aa8.98□□□□□ -0.97
SS18L1-202ENST00000370848 A0A087X002 238 aa8.98□□□□□ -0.97
SS18L1-202ENST00000370848 TRBV10-2A0A0K0K1G8 114 aa8.98□□□□□ -0.97
SS18L1-202ENST00000370848 NDUFC2O95298 119 aa8.98□□□□□ -0.97
SS18L1-202ENST00000370848 DDTP30046 118 aa8.98□□□□□ -0.97
SS18L1-202ENST00000370848 SPRR1AP35321 89 aa8.98□□□□□ -0.97
SS18L1-202ENST00000370848 HIGD2AQ9BW72 106 aa8.97□□□□□ -0.97
SS18L1-202ENST00000370848 KRTAP4-16G5E9R7 235 aaPredicted RBP8.96□□□□□ -0.98
SS18L1-202ENST00000370848 RPL13AP40429 203 aaKnown RBP8.96□□□□□ -0.98
SS18L1-202ENST00000370848 SCGB1D4Q6XE38 83 aa8.96□□□□□ -0.98
SS18L1-202ENST00000370848 IGLV6-57P01721 117 aa8.95□□□□□ -0.98
SS18L1-202ENST00000370848 LINC00337Q8N6G1 96 aa8.95□□□□□ -0.98
SS18L1-202ENST00000370848 ETDCA0A1B0GVM5 59 aa8.94□□□□□ -0.98
SS18L1-202ENST00000370848 S100A7L2Q5SY68 101 aa8.94□□□□□ -0.98
SS18L1-202ENST00000370848 SPANXCQ9NY87 97 aa8.94□□□□□ -0.98
SS18L1-202ENST00000370848 SCGB1D1O95968 90 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms