RNA–Protein interactions for RNA: ENST00000370536.4

SOX3-201, Transcript of SRY-box 3, humanhuman

APPRIS P1 BASIC

Gene SOX3, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3-201ENST00000370536 WFDC10BQ8IUB3 73 aa14.12□□□□□ -0.15
SOX3-201ENST00000370536 OBSCN-AS1Q96MR7 158 aa14.12□□□□□ -0.15
SOX3-201ENST00000370536 C9orf116Q5BN46 136 aaPredicted RBP14.11□□□□□ -0.15
SOX3-201ENST00000370536 TENM3Q9P273 2699 aa14.11□□□□□ -0.15
SOX3-201ENST00000370536 HIST1H4AP62805 103 aaKnown RBP14.11□□□□□ -0.15
SOX3-201ENST00000370536 C6orf223Q8N319 242 aa14.1□□□□□ -0.15
SOX3-201ENST00000370536 KLK5Q9Y337 293 aaPredicted RBP14.1□□□□□ -0.15
SOX3-201ENST00000370536 COX7CP15954 63 aa14.09□□□□□ -0.15
SOX3-201ENST00000370536 SPAG11BQ08648 103 aa14.09□□□□□ -0.15
SOX3-201ENST00000370536 OR13C6PQ8NH95 151 aa14.09□□□□□ -0.15
SOX3-201ENST00000370536 PRB2P02812 416 aaPredicted RBP14.09□□□□□ -0.15
SOX3-201ENST00000370536 ATOX1O00244 68 aa14.08□□□□□ -0.16
SOX3-201ENST00000370536 C11orf45Q8TAV5 145 aa14.08□□□□□ -0.16
SOX3-201ENST00000370536 C14orf132Q9NPU4 83 aa14.08□□□□□ -0.16
SOX3-201ENST00000370536 DEFB131BA0A096LNP1 70 aa14.07□□□□□ -0.16
SOX3-201ENST00000370536 C9orf129Q5T035 196 aaKnown RBP14.07□□□□□ -0.16
SOX3-201ENST00000370536 C10orf25Q5T742 122 aa14.07□□□□□ -0.16
SOX3-201ENST00000370536 COL6A5A8TX70 2615 aa14.07□□□□□ -0.16
SOX3-201ENST00000370536 LECT2O14960 151 aa14.06□□□□□ -0.16
SOX3-201ENST00000370536 NDUFC2O95298 119 aa14.06□□□□□ -0.16
SOX3-201ENST00000370536 ESRGQ1W209 222 aa14.06□□□□□ -0.16
SOX3-201ENST00000370536 UNQ6190/PRO20217Q6UXQ8 127 aa14.06□□□□□ -0.16
SOX3-201ENST00000370536 Q6JHZ5 121 aa14.06□□□□□ -0.16
SOX3-201ENST00000370536 C2orf48Q96LS8 159 aa14.06□□□□□ -0.16
SOX3-201ENST00000370536 BAHCC1Q9P281 2608 aa14.05□□□□□ -0.16
SOX3-201ENST00000370536 NOTCH1P46531 2555 aa14.05□□□□□ -0.16
SOX3-201ENST00000370536 PRR3P79522 188 aaKnown RBP14.04□□□□□ -0.16
SOX3-201ENST00000370536 MUC7Q8TAX7 377 aa14.04□□□□□ -0.16
SOX3-201ENST00000370536 CRYGAP11844 174 aa14.03□□□□□ -0.16
SOX3-201ENST00000370536 LINC00846Q9NV44 126 aa14.02□□□□□ -0.16
SOX3-201ENST00000370536 RPL18AQ02543 176 aaKnown RBP14.02□□□□□ -0.17
SOX3-201ENST00000370536 ORMDL1Q9P0S3 153 aa14.01□□□□□ -0.17
SOX3-201ENST00000370536 NCR3O14931 201 aa13.99□□□□□ -0.17
SOX3-201ENST00000370536 Q8NDZ9 215 aa13.99□□□□□ -0.17
SOX3-201ENST00000370536 IGKV3D-7A0A0C4DH55 119 aa13.98□□□□□ -0.17
SOX3-201ENST00000370536 KRTAP26-1Q6PEX3 210 aa13.98□□□□□ -0.17
SOX3-201ENST00000370536 HUWE1Q7Z6Z7 4374 aaKnown RBP13.98□□□□□ -0.17
SOX3-201ENST00000370536 A0A1B0GX51 115 aa13.97□□□□□ -0.17
SOX3-201ENST00000370536 MRAPQ8TCY5 172 aa13.97□□□□□ -0.17
SOX3-201ENST00000370536 K7EIL1 84 aa13.97□□□□□ -0.17
SOX3-201ENST00000370536 SLPIP03973 132 aa13.97□□□□□ -0.17
SOX3-201ENST00000370536 LINC00167Q96N53 147 aa13.96□□□□□ -0.17
SOX3-201ENST00000370536 CCKP06307 115 aa13.96□□□□□ -0.18
SOX3-201ENST00000370536 TM2D3Q9BRN9 247 aa13.95□□□□□ -0.18
SOX3-201ENST00000370536 HIGD2BQ4VC39 106 aa13.94□□□□□ -0.18
SOX3-201ENST00000370536 C6orf48Q9UBA6 75 aa13.94□□□□□ -0.18
SOX3-201ENST00000370536 GVQW2A0A096LPI5 108 aaPredicted RBP13.94□□□□□ -0.18
SOX3-201ENST00000370536 LINC01556Q5JQF7 62 aa13.94□□□□□ -0.18
SOX3-201ENST00000370536 JMJD7-PLA2G4BH0Y9G9 81 aa13.93□□□□□ -0.18
SOX3-201ENST00000370536 NBEAL1Q6ZS30 2694 aa13.93□□□□□ -0.18
SOX3-201ENST00000370536 SERP2Q8N6R1 65 aa13.93□□□□□ -0.18
SOX3-201ENST00000370536 ZNF561-AS1K7EIQ3 104 aa13.91□□□□□ -0.18
SOX3-201ENST00000370536 S100A7L2Q5SY68 101 aa13.91□□□□□ -0.18
SOX3-201ENST00000370536 TRAV10A0A0B4J240 114 aa13.91□□□□□ -0.18
SOX3-201ENST00000370536 hADV29S1A0JD25 119 aa13.91□□□□□ -0.18
SOX3-201ENST00000370536 J3KT08 172 aa13.9□□□□□ -0.18
SOX3-201ENST00000370536 Q8N814 137 aa13.9□□□□□ -0.18
SOX3-201ENST00000370536 TMEM256-PLSCR3K7ERE1 68 aa13.9□□□□□ -0.18
SOX3-201ENST00000370536 C15orf56Q8N910 161 aa13.9□□□□□ -0.18
SOX3-201ENST00000370536 C1orf43Q9BWL3 253 aa13.9□□□□□ -0.18
SOX3-201ENST00000370536 A0A087WVE0 104 aa13.88□□□□□ -0.19
SOX3-201ENST00000370536 USP17L23D6RBM5 183 aa13.88□□□□□ -0.19
SOX3-201ENST00000370536 RPS28P62857 69 aaKnown RBP13.88□□□□□ -0.19
SOX3-201ENST00000370536 CAMK2N2Q96S95 79 aa13.88□□□□□ -0.19
SOX3-201ENST00000370536 IGKV2D-24A0A075B6R9 120 aa13.88□□□□□ -0.19
SOX3-201ENST00000370536 XAGE1AQ9HD64 81 aa13.87□□□□□ -0.19
SOX3-201ENST00000370536 ATP5EP2Q5VTU8 51 aa13.86□□□□□ -0.19
SOX3-201ENST00000370536 DNAH10OSP0CZ25 163 aa13.85□□□□□ -0.19
SOX3-201ENST00000370536 UPK3BQ9BT76 320 aa13.85□□□□□ -0.19
SOX3-201ENST00000370536 LOC107984640A0A0U1RRK4 108 aa13.85□□□□□ -0.19
SOX3-201ENST00000370536 Q6ZRU5 148 aa13.85□□□□□ -0.19
SOX3-201ENST00000370536 LINC00588Q9Y4M8 146 aa13.84□□□□□ -0.19
SOX3-201ENST00000370536 TMEM258P61165 79 aa13.84□□□□□ -0.19
SOX3-201ENST00000370536 C6orf99Q4VX62 202 aa13.83□□□□□ -0.2
SOX3-201ENST00000370536 CYSTM1Q9H1C7 97 aa13.82□□□□□ -0.2
SOX3-201ENST00000370536 MGAM2Q2M2H8 2515 aa13.81□□□□□ -0.2
SOX3-201ENST00000370536 IGLV6-57P01721 117 aa13.8□□□□□ -0.2
SOX3-201ENST00000370536 DNAH1Q9P2D7 4330 aa13.79□□□□□ -0.2
SOX3-201ENST00000370536 LINC00575Q6W349 94 aa13.78□□□□□ -0.2
SOX3-201ENST00000370536 TRBV10-3A0A0K0K1G6 114 aa13.78□□□□□ -0.2
SOX3-201ENST00000370536 FAM19A5Q7Z5A7 132 aaPredicted RBP13.77□□□□□ -0.21
SOX3-201ENST00000370536 UBL5Q9BZL1 73 aa13.76□□□□□ -0.21
SOX3-201ENST00000370536 NDUFC2-KCTD14E9PQ53 114 aa13.75□□□□□ -0.21
SOX3-201ENST00000370536 DPH3Q96FX2 82 aa13.75□□□□□ -0.21
SOX3-201ENST00000370536 MDFIQ99750 246 aa13.75□□□□□ -0.21
SOX3-201ENST00000370536 DNAH9Q9NYC9 4486 aa13.73□□□□□ -0.21
SOX3-201ENST00000370536 F8WDY8 70 aa13.73□□□□□ -0.21
SOX3-201ENST00000370536 VPREB1P12018 145 aa13.73□□□□□ -0.21
SOX3-201ENST00000370536 GHRHP01286 108 aa13.73□□□□□ -0.21
SOX3-201ENST00000370536 SYCNQ0VAF6 134 aa13.73□□□□□ -0.21
SOX3-201ENST00000370536 H3BQ85 93 aa13.72□□□□□ -0.21
SOX3-201ENST00000370536 Q6ZRP5 223 aa13.72□□□□□ -0.21
SOX3-201ENST00000370536 RBM3P98179 157 aaKnown RBP13.71□□□□□ -0.21
SOX3-201ENST00000370536 CASC10Q5T4H9 136 aa13.71□□□□□ -0.21
SOX3-201ENST00000370536 FAM19A1Q7Z5A9 133 aa13.71□□□□□ -0.21
SOX3-201ENST00000370536 TRAV23DV6A0A075B6W5 121 aa13.7□□□□□ -0.22
SOX3-201ENST00000370536 DIRC1Q969H9 104 aa13.7□□□□□ -0.22
SOX3-201ENST00000370536 LOC110117498A0A087WWA1 95 aa13.69□□□□□ -0.22
SOX3-201ENST00000370536 Q6ZQT0 140 aa13.69□□□□□ -0.22
SOX3-201ENST00000370536 TRBV7-6A0A0J9YX20 115 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms