RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 Q6ZRU5 148 aa11.96□□□□□ -0.49
LMNA-204ENST00000368298 ZNF625Q96I27 306 aaPredicted RBP11.96□□□□□ -0.49
LMNA-204ENST00000368298 RPL24P83731 157 aaKnown RBP11.95□□□□□ -0.5
LMNA-204ENST00000368298 ADAMTSL4-AS1Q5T5F5 129 aa11.95□□□□□ -0.5
LMNA-204ENST00000368298 TOMM7Q9P0U1 55 aa11.95□□□□□ -0.5
LMNA-204ENST00000368298 PKIGQ9Y2B9 76 aa11.95□□□□□ -0.5
LMNA-204ENST00000368298 HERV-K104P63124 156 aa11.95□□□□□ -0.5
LMNA-204ENST00000368298 HAMPP81172 84 aa11.95□□□□□ -0.5
LMNA-204ENST00000368298 UBE2V1Q13404 147 aa11.94□□□□□ -0.5
LMNA-204ENST00000368298 Q8IZM0 81 aa11.94□□□□□ -0.5
LMNA-204ENST00000368298 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.94□□□□□ -0.5
LMNA-204ENST00000368298 A0A1W2PPM0 123 aa11.93□□□□□ -0.5
LMNA-204ENST00000368298 A4D1N5 150 aa11.93□□□□□ -0.5
LMNA-204ENST00000368298 PANO1I0J062 215 aa11.92□□□□□ -0.5
LMNA-204ENST00000368298 PRSS2P07478 247 aa11.92□□□□□ -0.5
LMNA-204ENST00000368298 CFC1BP0CG36 223 aa11.92□□□□□ -0.5
LMNA-204ENST00000368298 CFC1P0CG37 223 aa11.92□□□□□ -0.5
LMNA-204ENST00000368298 MEIG1Q5JSS6 88 aa11.92□□□□□ -0.5
LMNA-204ENST00000368298 SCXQ7RTU7 201 aa11.92□□□□□ -0.5
LMNA-204ENST00000368298 UNQ6190/PRO20217Q6UXQ8 127 aa11.91□□□□□ -0.5
LMNA-204ENST00000368298 Q8N1X5 172 aa11.91□□□□□ -0.5
LMNA-204ENST00000368298 CIRBP-AS1Q8TBR5 109 aa11.91□□□□□ -0.5
LMNA-204ENST00000368298 KRTAP4-5Q9BYR2 181 aa11.91□□□□□ -0.5
LMNA-204ENST00000368298 FABP2P12104 132 aa11.9□□□□□ -0.5
LMNA-204ENST00000368298 IFITM1P13164 125 aa11.9□□□□□ -0.5
LMNA-204ENST00000368298 C10orf25Q5T742 122 aa11.9□□□□□ -0.5
LMNA-204ENST00000368298 SPACA4Q8TDM5 124 aa11.9□□□□□ -0.5
LMNA-204ENST00000368298 NPC2P61916 151 aa11.89□□□□□ -0.51
LMNA-204ENST00000368298 C6orf226Q5I0X4 101 aa11.89□□□□□ -0.51
LMNA-204ENST00000368298 TRBV30A0A0K0K1B3 111 aa11.89□□□□□ -0.51
LMNA-204ENST00000368298 LOC107984640A0A0U1RRK4 108 aa11.89□□□□□ -0.51
LMNA-204ENST00000368298 C2orf82Q6UX34 121 aa11.89□□□□□ -0.51
LMNA-204ENST00000368298 DAND5Q8N907 189 aa11.89□□□□□ -0.51
LMNA-204ENST00000368298 LINC00474Q9P2X8 69 aa11.89□□□□□ -0.51
LMNA-204ENST00000368298 C6orf48Q9UBA6 75 aa11.89□□□□□ -0.51
LMNA-204ENST00000368298 DNAH8Q96JB1 4490 aa11.88□□□□□ -0.51
LMNA-204ENST00000368298 A0A096LNI7 61 aa11.88□□□□□ -0.51
LMNA-204ENST00000368298 A0A0B4J2C4 111 aa11.88□□□□□ -0.51
LMNA-204ENST00000368298 A0A0U1RRA0 63 aa11.88□□□□□ -0.51
LMNA-204ENST00000368298 GAGE10A6NGK3 116 aa11.88□□□□□ -0.51
LMNA-204ENST00000368298 K7EP34 96 aa11.88□□□□□ -0.51
LMNA-204ENST00000368298 TLX1NBP0CAT3 122 aa11.88□□□□□ -0.51
LMNA-204ENST00000368298 CHTF8P0CG12 524 aa11.88□□□□□ -0.51
LMNA-204ENST00000368298 GTF2H5Q6ZYL4 71 aa11.88□□□□□ -0.51
LMNA-204ENST00000368298 EIF4EBP3O60516 100 aaPredicted RBP11.87□□□□□ -0.51
LMNA-204ENST00000368298 TSPAN13O95857 204 aa11.87□□□□□ -0.51
LMNA-204ENST00000368298 CXCL5P42830 114 aa11.87□□□□□ -0.51
LMNA-204ENST00000368298 CKS1BP61024 79 aa11.87□□□□□ -0.51
LMNA-204ENST00000368298 SFTA2Q6UW10 78 aa11.87□□□□□ -0.51
LMNA-204ENST00000368298 SPCS1Q9Y6A9 102 aa11.87□□□□□ -0.51
LMNA-204ENST00000368298 LINC00308Q8TCZ7 52 aa11.86□□□□□ -0.51
LMNA-204ENST00000368298 PRO1854Q9UHT4 67 aa11.86□□□□□ -0.51
LMNA-204ENST00000368298 ABCA13Q86UQ4 5058 aa11.86□□□□□ -0.51
LMNA-204ENST00000368298 COPS9Q8WXC6 57 aa11.85□□□□□ -0.51
LMNA-204ENST00000368298 A0A087WYN8 130 aa11.84□□□□□ -0.51
LMNA-204ENST00000368298 PLAC8Q9NZF1 115 aa11.84□□□□□ -0.51
LMNA-204ENST00000368298 IGKV2-24A0A0C4DH68 120 aa11.83□□□□□ -0.52
LMNA-204ENST00000368298 SMR3BP02814 79 aaPredicted RBP11.83□□□□□ -0.52
LMNA-204ENST00000368298 SOSTDC1Q6X4U4 206 aa11.83□□□□□ -0.52
LMNA-204ENST00000368298 DPH3Q96FX2 82 aa11.83□□□□□ -0.52
LMNA-204ENST00000368298 EPM2AB3EWF7 344 aa11.82□□□□□ -0.52
LMNA-204ENST00000368298 LINC00158P58513 81 aa11.81□□□□□ -0.52
LMNA-204ENST00000368298 GAGE2BQ13066 116 aa11.81□□□□□ -0.52
LMNA-204ENST00000368298 Q6ZRP5 223 aa11.81□□□□□ -0.52
LMNA-204ENST00000368298 ERG28Q9UKR5 140 aa11.81□□□□□ -0.52
LMNA-204ENST00000368298 NDUFC2-KCTD14E9PQ53 114 aa11.8□□□□□ -0.52
LMNA-204ENST00000368298 RPL18AQ02543 176 aaKnown RBP11.8□□□□□ -0.52
LMNA-204ENST00000368298 C9orf116Q5BN46 136 aaPredicted RBP11.8□□□□□ -0.52
LMNA-204ENST00000368298 MIR7-3HGQ8N6C7 128 aa11.8□□□□□ -0.52
LMNA-204ENST00000368298 PPDPFQ9H3Y8 114 aa11.8□□□□□ -0.52
LMNA-204ENST00000368298 FAM229AH3BQW9 127 aa11.79□□□□□ -0.52
LMNA-204ENST00000368298 FAT1Q14517 4588 aa11.79□□□□□ -0.52
LMNA-204ENST00000368298 H7C2G1 150 aa11.78□□□□□ -0.52
LMNA-204ENST00000368298 LYRM7Q5U5X0 104 aa11.78□□□□□ -0.52
LMNA-204ENST00000368298 Q5VSD8 79 aa11.78□□□□□ -0.52
LMNA-204ENST00000368298 LINC00528Q8N1L1 170 aa11.78□□□□□ -0.52
LMNA-204ENST00000368298 LOC107984156A0A0G2JMH3 177 aa11.77□□□□□ -0.52
LMNA-204ENST00000368298 PFN2P35080 140 aa11.77□□□□□ -0.52
LMNA-204ENST00000368298 Q1RN00 199 aa11.77□□□□□ -0.52
LMNA-204ENST00000368298 ARL17AQ8IVW1 177 aa11.77□□□□□ -0.52
LMNA-204ENST00000368298 RPL13AP40429 203 aaKnown RBP11.75□□□□□ -0.53
LMNA-204ENST00000368298 PSMB2P49721 201 aa11.75□□□□□ -0.53
LMNA-204ENST00000368298 A0A1W2PNN7 141 aa11.74□□□□□ -0.53
LMNA-204ENST00000368298 PLA2G1BP04054 148 aaKnown RBP11.73□□□□□ -0.53
LMNA-204ENST00000368298 GAGE2EQ4V326 116 aa11.73□□□□□ -0.53
LMNA-204ENST00000368298 GAGE2DQ9UEU5 116 aa11.73□□□□□ -0.53
LMNA-204ENST00000368298 SCGB1C2P0DMR2 95 aa11.72□□□□□ -0.53
LMNA-204ENST00000368298 KRTAP10-4P60372 401 aaPredicted RBP11.71□□□□□ -0.53
LMNA-204ENST00000368298 C9orf129Q5T035 196 aaKnown RBP11.71□□□□□ -0.53
LMNA-204ENST00000368298 SND1-IT1Q9HBX3 110 aa11.71□□□□□ -0.53
LMNA-204ENST00000368298 H3BMG7 143 aa11.7□□□□□ -0.54
LMNA-204ENST00000368298 COX17Q14061 63 aa11.7□□□□□ -0.54
LMNA-204ENST00000368298 TRIAP1O43715 76 aa11.69□□□□□ -0.54
LMNA-204ENST00000368298 TCL1BO95988 128 aa11.69□□□□□ -0.54
LMNA-204ENST00000368298 SRRM2Q9UQ35 2752 aaKnown RBP11.68□□□□□ -0.54
LMNA-204ENST00000368298 TRBV20-1A0A075B6N2 111 aa11.68□□□□□ -0.54
LMNA-204ENST00000368298 KRTAP7-1Q8IUC3 87 aa11.68□□□□□ -0.54
LMNA-204ENST00000368298 C7orf33Q8WU49 177 aa11.68□□□□□ -0.54
LMNA-204ENST00000368298 FAM168BA1KXE4 195 aa11.67□□□□□ -0.54
LMNA-204ENST00000368298 TRAV13-2A0A0B4J235 113 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms