RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 TMEM126AQ9H061 195 aa8.71□□□□□ -1.02
CTSD-202ENST00000367196 CTAG1AP78358 180 aa8.7□□□□□ -1.02
CTSD-202ENST00000367196 LINC00304Q8N9R0 145 aa8.7□□□□□ -1.02
CTSD-202ENST00000367196 PRLHP81277 87 aa8.69□□□□□ -1.02
CTSD-202ENST00000367196 URB1-AS1Q96HZ7 61 aa8.69□□□□□ -1.02
CTSD-202ENST00000367196 C11orf86A6NJI1 115 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 HIST1H2BKO60814 126 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 HIST1H2BJP06899 126 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 HIST1H2BOP23527 126 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 HIST1H2BBP33778 126 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 HIST1H2BDP58876 126 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 HIST1H2BCP62807 126 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 PMCHL1Q16048 86 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 HIST2H2BEQ16778 126 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 KRTAP13-2Q52LG2 175 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.68□□□□□ -1.02
CTSD-202ENST00000367196 HIST1H2BHQ93079 126 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 ZNF625Q96I27 306 aaPredicted RBP8.68□□□□□ -1.02
CTSD-202ENST00000367196 HIST1H2BNQ99877 126 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 HIST1H2BMQ99879 126 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 ANAPC11Q9NYG5 84 aa8.68□□□□□ -1.02
CTSD-202ENST00000367196 TMEM238C9JI98 176 aa8.67□□□□□ -1.02
CTSD-202ENST00000367196 TMA7Q9Y2S6 64 aaKnown RBP8.67□□□□□ -1.02
CTSD-202ENST00000367196 CHTOPQ9Y3Y2 248 aaKnown RBP8.67□□□□□ -1.02
CTSD-202ENST00000367196 M0R378 163 aa8.66□□□□□ -1.02
CTSD-202ENST00000367196 LINC00158P58513 81 aa8.65□□□□□ -1.02
CTSD-202ENST00000367196 MUC2Q02817 5179 aa8.64□□□□□ -1.03
CTSD-202ENST00000367196 TRAV12-1A0A0B4J245 112 aa8.64□□□□□ -1.03
CTSD-202ENST00000367196 S100A6P06703 90 aa8.64□□□□□ -1.03
CTSD-202ENST00000367196 CHCHD1Q96BP2 118 aaKnown RBP8.64□□□□□ -1.03
CTSD-202ENST00000367196 HIGD2AQ9BW72 106 aa8.63□□□□□ -1.03
CTSD-202ENST00000367196 ZNF706Q9Y5V0 76 aaPredicted RBP8.63□□□□□ -1.03
CTSD-202ENST00000367196 TMEM223A0PJW6 202 aa8.62□□□□□ -1.03
CTSD-202ENST00000367196 LINC00587B1AMM8 73 aa8.62□□□□□ -1.03
CTSD-202ENST00000367196 IFI27L1Q96BM0 104 aa8.62□□□□□ -1.03
CTSD-202ENST00000367196 PLEKHB2Q96CS7 222 aa8.62□□□□□ -1.03
CTSD-202ENST00000367196 HERV-K104P63124 156 aa8.61□□□□□ -1.03
CTSD-202ENST00000367196 MEIG1Q5JSS6 88 aa8.61□□□□□ -1.03
CTSD-202ENST00000367196 COA6Q5JTJ3 125 aaKnown RBP8.61□□□□□ -1.03
CTSD-202ENST00000367196 RETNLBQ9BQ08 111 aa8.61□□□□□ -1.03
CTSD-202ENST00000367196 PRYO14603 147 aa8.6□□□□□ -1.03
CTSD-202ENST00000367196 SERF1AO75920 110 aa8.6□□□□□ -1.03
CTSD-202ENST00000367196 TPRXLQ17RH7 258 aa8.6□□□□□ -1.03
CTSD-202ENST00000367196 SPAG11AQ6PDA7 123 aa8.6□□□□□ -1.03
CTSD-202ENST00000367196 Q8NDZ9 215 aa8.6□□□□□ -1.03
CTSD-202ENST00000367196 A0A0U1RRA0 63 aa8.59□□□□□ -1.03
CTSD-202ENST00000367196 HSBP1O75506 76 aa8.59□□□□□ -1.03
CTSD-202ENST00000367196 S100A12P80511 92 aa8.59□□□□□ -1.03
CTSD-202ENST00000367196 CDIP1Q9H305 208 aa8.59□□□□□ -1.03
CTSD-202ENST00000367196 BOD1L2Q8IYS8 172 aa8.58□□□□□ -1.04
CTSD-202ENST00000367196 MAP1LC3CQ9BXW4 147 aa8.58□□□□□ -1.04
CTSD-202ENST00000367196 IGLV7-46A0A075B6I9 117 aa8.57□□□□□ -1.04
CTSD-202ENST00000367196 SMIM13P0DJ93 91 aa8.57□□□□□ -1.04
CTSD-202ENST00000367196 LINC00310P59036 64 aa8.57□□□□□ -1.04
CTSD-202ENST00000367196 SPRR4Q96PI1 79 aa8.57□□□□□ -1.04
CTSD-202ENST00000367196 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
CTSD-202ENST00000367196 SNRPEP62304 92 aaKnown RBP8.56□□□□□ -1.04
CTSD-202ENST00000367196 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
CTSD-202ENST00000367196 C3orf22Q8N5N4 141 aa8.56□□□□□ -1.04
CTSD-202ENST00000367196 MIR7-3HGQ8N6C7 128 aa8.56□□□□□ -1.04
CTSD-202ENST00000367196 LINC00337Q8N6G1 96 aa8.56□□□□□ -1.04
CTSD-202ENST00000367196 ETDCA0A1B0GVM5 59 aa8.55□□□□□ -1.04
CTSD-202ENST00000367196 C5orf52A6NGY3 159 aa8.55□□□□□ -1.04
CTSD-202ENST00000367196 S100A2P29034 98 aa8.55□□□□□ -1.04
CTSD-202ENST00000367196 KCNQ1DNQ9H478 68 aa8.55□□□□□ -1.04
CTSD-202ENST00000367196 NDUFA12Q9UI09 145 aa8.55□□□□□ -1.04
CTSD-202ENST00000367196 NCR3O14931 201 aa8.54□□□□□ -1.04
CTSD-202ENST00000367196 SPRR1AP35321 89 aa8.53□□□□□ -1.04
CTSD-202ENST00000367196 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
CTSD-202ENST00000367196 HIST3H2BBQ8N257 126 aa8.53□□□□□ -1.04
CTSD-202ENST00000367196 FAM19A2Q8N3H0 131 aa8.53□□□□□ -1.04
CTSD-202ENST00000367196 PPDPFQ9H3Y8 114 aa8.52□□□□□ -1.05
CTSD-202ENST00000367196 H0Y8G0 127 aa8.51□□□□□ -1.05
CTSD-202ENST00000367196 PLNP26678 52 aa8.51□□□□□ -1.05
CTSD-202ENST00000367196 TRBV10-3A0A0K0K1G6 114 aa8.5□□□□□ -1.05
CTSD-202ENST00000367196 LEPROTL1O95214 131 aa8.5□□□□□ -1.05
CTSD-202ENST00000367196 HERVK_113P61574 105 aa8.5□□□□□ -1.05
CTSD-202ENST00000367196 MIEN1Q9BRT3 115 aa8.5□□□□□ -1.05
CTSD-202ENST00000367196 HSPB8Q9UJY1 196 aa8.5□□□□□ -1.05
CTSD-202ENST00000367196 LEPROTO15243 131 aa8.49□□□□□ -1.05
CTSD-202ENST00000367196 FABP4P15090 132 aa8.49□□□□□ -1.05
CTSD-202ENST00000367196 Q8NBF4 154 aa8.49□□□□□ -1.05
CTSD-202ENST00000367196 SMCR5Q8TEV8 140 aa8.49□□□□□ -1.05
CTSD-202ENST00000367196 HIST1H2BLQ99880 126 aa8.49□□□□□ -1.05
CTSD-202ENST00000367196 LOC107984156A0A0G2JMH3 177 aa8.48□□□□□ -1.05
CTSD-202ENST00000367196 TRBV10-2A0A0K0K1G8 114 aa8.48□□□□□ -1.05
CTSD-202ENST00000367196 KRTAP4-16G5E9R7 235 aaPredicted RBP8.48□□□□□ -1.05
CTSD-202ENST00000367196 SPINK1P00995 79 aa8.48□□□□□ -1.05
CTSD-202ENST00000367196 NMUP48645 174 aa8.48□□□□□ -1.05
CTSD-202ENST00000367196 ARL17AQ8IVW1 177 aa8.48□□□□□ -1.05
CTSD-202ENST00000367196 DDTP30046 118 aa8.47□□□□□ -1.05
CTSD-202ENST00000367196 LINC00483Q53H64 154 aa8.47□□□□□ -1.05
CTSD-202ENST00000367196 SPANXB1Q9NS25 103 aaPredicted RBP8.47□□□□□ -1.05
CTSD-202ENST00000367196 B5MCH6 92 aa8.45□□□□□ -1.06
CTSD-202ENST00000367196 J3QQQ9 107 aa8.45□□□□□ -1.06
CTSD-202ENST00000367196 DPM2O94777 84 aa8.45□□□□□ -1.06
CTSD-202ENST00000367196 LGALS3P17931 250 aaKnown RBP8.45□□□□□ -1.06
CTSD-202ENST00000367196 DAND5Q8N907 189 aa8.45□□□□□ -1.06
CTSD-202ENST00000367196 TSPEAR-AS2P59090 65 aa8.44□□□□□ -1.06
CTSD-202ENST00000367196 RPS29P62273 56 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms