RNA–Protein interactions for RNA: ENST00000362025.9

RAB3IP-202, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-202ENST00000362025 SMIM1B2RUZ4 78 aa10.53□□□□□ -0.72
RAB3IP-202ENST00000362025 LINC01600Q96MT4 127 aa10.53□□□□□ -0.72
RAB3IP-202ENST00000362025 PTTG1IPP53801 180 aa10.52□□□□□ -0.73
RAB3IP-202ENST00000362025 GAGE2BQ13066 116 aa10.52□□□□□ -0.73
RAB3IP-202ENST00000362025 C5orf38Q86SI9 138 aa10.51□□□□□ -0.73
RAB3IP-202ENST00000362025 HIST1H4GQ99525 98 aa10.51□□□□□ -0.73
RAB3IP-202ENST00000362025 NDUFA12Q9UI09 145 aa10.51□□□□□ -0.73
RAB3IP-202ENST00000362025 IGHV3OR16-9A0A0B4J2B5 98 aa10.51□□□□□ -0.73
RAB3IP-202ENST00000362025 IGLV5-39A0A0G2JS06 123 aa10.51□□□□□ -0.73
RAB3IP-202ENST00000362025 LOC107984640A0A0U1RRK4 108 aa10.51□□□□□ -0.73
RAB3IP-202ENST00000362025 COL5A1-AS1Q5SY13 56 aa10.51□□□□□ -0.73
RAB3IP-202ENST00000362025 CAMK2N2Q96S95 79 aa10.5□□□□□ -0.73
RAB3IP-202ENST00000362025 SPINK6Q6UWN8 80 aa10.49□□□□□ -0.73
RAB3IP-202ENST00000362025 Q6ZRP5 223 aa10.49□□□□□ -0.73
RAB3IP-202ENST00000362025 SRSF9Q13242 221 aaKnown RBP eCLIP10.48□□□□□ -0.73
RAB3IP-202ENST00000362025 ORAOV1Q8WV07 137 aa10.48□□□□□ -0.73
RAB3IP-202ENST00000362025 FXYD2P54710 66 aa10.48□□□□□ -0.73
RAB3IP-202ENST00000362025 CEND1Q8N111 149 aa10.48□□□□□ -0.73
RAB3IP-202ENST00000362025 TNXBP22105 4242 aa10.47□□□□□ -0.73
RAB3IP-202ENST00000362025 A0A087WZ39 114 aa10.47□□□□□ -0.73
RAB3IP-202ENST00000362025 A0A0J9YXY3 114 aa10.47□□□□□ -0.73
RAB3IP-202ENST00000362025 A0A1W2PNN7 141 aa10.47□□□□□ -0.73
RAB3IP-202ENST00000362025 APOMO95445 188 aa10.47□□□□□ -0.73
RAB3IP-202ENST00000362025 C2orf48Q96LS8 159 aa10.47□□□□□ -0.73
RAB3IP-202ENST00000362025 TOMM7Q9P0U1 55 aa10.47□□□□□ -0.73
RAB3IP-202ENST00000362025 SPAG11BQ08648 103 aa10.46□□□□□ -0.73
RAB3IP-202ENST00000362025 A0A1B0GV90 55 aa10.46□□□□□ -0.74
RAB3IP-202ENST00000362025 TAL2Q16559 108 aa10.46□□□□□ -0.74
RAB3IP-202ENST00000362025 REG3GQ6UW15 175 aa10.46□□□□□ -0.74
RAB3IP-202ENST00000362025 NDUFA1O15239 70 aa10.45□□□□□ -0.74
RAB3IP-202ENST00000362025 RPL18AQ02543 176 aaKnown RBP10.45□□□□□ -0.74
RAB3IP-202ENST00000362025 ZNF625Q96I27 306 aaPredicted RBP10.45□□□□□ -0.74
RAB3IP-202ENST00000362025 A6NDN8 102 aa10.44□□□□□ -0.74
RAB3IP-202ENST00000362025 C9orf116Q5BN46 136 aaPredicted RBP10.44□□□□□ -0.74
RAB3IP-202ENST00000362025 COX7B2Q8TF08 81 aa10.44□□□□□ -0.74
RAB3IP-202ENST00000362025 TMEM238C9JI98 176 aa10.43□□□□□ -0.74
RAB3IP-202ENST00000362025 KRTAP10-8P60410 259 aa10.43□□□□□ -0.74
RAB3IP-202ENST00000362025 Q6ZVH6 145 aa10.43□□□□□ -0.74
RAB3IP-202ENST00000362025 SPANXB1Q9NS25 103 aaPredicted RBP10.43□□□□□ -0.74
RAB3IP-202ENST00000362025 NHP2Q9NX24 153 aaKnown RBP10.42□□□□□ -0.74
RAB3IP-202ENST00000362025 RNF151Q2KHN1 245 aa10.4□□□□□ -0.74
RAB3IP-202ENST00000362025 PHF5AQ7RTV0 110 aaKnown RBP10.4□□□□□ -0.74
RAB3IP-202ENST00000362025 LITAFQ99732 161 aa10.4□□□□□ -0.74
RAB3IP-202ENST00000362025 PSORS1C2Q9UIG4 136 aa10.4□□□□□ -0.74
RAB3IP-202ENST00000362025 K7ERJ3 54 aa10.4□□□□□ -0.75
RAB3IP-202ENST00000362025 ADAMTSL4-AS1Q5T5F5 129 aa10.4□□□□□ -0.75
RAB3IP-202ENST00000362025 A0A0U1RRA0 63 aa10.39□□□□□ -0.75
RAB3IP-202ENST00000362025 TAX1BP3O14907 124 aa10.39□□□□□ -0.75
RAB3IP-202ENST00000362025 DAND5Q8N907 189 aa10.39□□□□□ -0.75
RAB3IP-202ENST00000362025 RAB37Q96AX2 223 aa10.39□□□□□ -0.75
RAB3IP-202ENST00000362025 PRSS2P07478 247 aa10.38□□□□□ -0.75
RAB3IP-202ENST00000362025 C6orf226Q5I0X4 101 aa10.38□□□□□ -0.75
RAB3IP-202ENST00000362025 MEIG1Q5JSS6 88 aa10.38□□□□□ -0.75
RAB3IP-202ENST00000362025 C10orf25Q5T742 122 aa10.38□□□□□ -0.75
RAB3IP-202ENST00000362025 NPC2P61916 151 aa10.38□□□□□ -0.75
RAB3IP-202ENST00000362025 TMEM238LA0A1B0GVL6 79 aa10.37□□□□□ -0.75
RAB3IP-202ENST00000362025 A6NJY4 79 aa10.37□□□□□ -0.75
RAB3IP-202ENST00000362025 HERV-K104P63124 156 aa10.37□□□□□ -0.75
RAB3IP-202ENST00000362025 UNQ6190/PRO20217Q6UXQ8 127 aa10.37□□□□□ -0.75
RAB3IP-202ENST00000362025 LRP2P98164 4655 aa10.37□□□□□ -0.75
RAB3IP-202ENST00000362025 SMIM13P0DJ93 91 aa10.37□□□□□ -0.75
RAB3IP-202ENST00000362025 C1orf137Q5JT78 98 aa10.37□□□□□ -0.75
RAB3IP-202ENST00000362025 MUSTN1Q8IVN3 82 aa10.37□□□□□ -0.75
RAB3IP-202ENST00000362025 Q8IZM0 81 aa10.37□□□□□ -0.75
RAB3IP-202ENST00000362025 LINC01561Q8N1V8 128 aa10.37□□□□□ -0.75
RAB3IP-202ENST00000362025 F8WDY8 70 aa10.36□□□□□ -0.75
RAB3IP-202ENST00000362025 FAM168BA1KXE4 195 aa10.35□□□□□ -0.75
RAB3IP-202ENST00000362025 TIMM17BO60830 172 aa10.35□□□□□ -0.75
RAB3IP-202ENST00000362025 SPANXDQ9BXN6 97 aa10.35□□□□□ -0.75
RAB3IP-202ENST00000362025 SPANXCQ9NY87 97 aa10.35□□□□□ -0.75
RAB3IP-202ENST00000362025 C6orf48Q9UBA6 75 aa10.35□□□□□ -0.75
RAB3IP-202ENST00000362025 C2orf82Q6UX34 121 aa10.35□□□□□ -0.75
RAB3IP-202ENST00000362025 NAA38Q9BRA0 125 aaKnown RBP10.34□□□□□ -0.75
RAB3IP-202ENST00000362025 CKS1BP61024 79 aa10.34□□□□□ -0.75
RAB3IP-202ENST00000362025 RPL24P83731 157 aaKnown RBP10.34□□□□□ -0.75
RAB3IP-202ENST00000362025 A4D1N5 150 aa10.33□□□□□ -0.76
RAB3IP-202ENST00000362025 GAGE2EQ4V326 116 aa10.33□□□□□ -0.76
RAB3IP-202ENST00000362025 GAGE2DQ9UEU5 116 aa10.33□□□□□ -0.76
RAB3IP-202ENST00000362025 TLX1NBP0CAT3 122 aa10.32□□□□□ -0.76
RAB3IP-202ENST00000362025 KIAA0087Q14695 138 aa10.32□□□□□ -0.76
RAB3IP-202ENST00000362025 FAM19A5Q7Z5A7 132 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-202ENST00000362025 KRTAP11-1Q8IUC1 163 aa10.32□□□□□ -0.76
RAB3IP-202ENST00000362025 EIF4EBP3O60516 100 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-202ENST00000362025 SFTA2Q6UW10 78 aa10.32□□□□□ -0.76
RAB3IP-202ENST00000362025 H3BUT2 72 aa10.31□□□□□ -0.76
RAB3IP-202ENST00000362025 PFN2P35080 140 aa10.31□□□□□ -0.76
RAB3IP-202ENST00000362025 A0A1B0GWB2 263 aa10.3□□□□□ -0.76
RAB3IP-202ENST00000362025 IGLV7-43P04211 117 aa10.3□□□□□ -0.76
RAB3IP-202ENST00000362025 C9orf118A6NHY6 69 aa10.3□□□□□ -0.76
RAB3IP-202ENST00000362025 CFC1BP0CG36 223 aa10.3□□□□□ -0.76
RAB3IP-202ENST00000362025 CFC1P0CG37 223 aa10.3□□□□□ -0.76
RAB3IP-202ENST00000362025 LINC00158P58513 81 aa10.3□□□□□ -0.76
RAB3IP-202ENST00000362025 CXCL5P42830 114 aa10.29□□□□□ -0.76
RAB3IP-202ENST00000362025 KRTAP7-1Q8IUC3 87 aa10.29□□□□□ -0.76
RAB3IP-202ENST00000362025 LINC00308Q8TCZ7 52 aa10.29□□□□□ -0.76
RAB3IP-202ENST00000362025 IFITM1P13164 125 aa10.29□□□□□ -0.76
RAB3IP-202ENST00000362025 MIR7-3HGQ8N6C7 128 aa10.29□□□□□ -0.76
RAB3IP-202ENST00000362025 ERG28Q9UKR5 140 aa10.29□□□□□ -0.76
RAB3IP-202ENST00000362025 RNF213Q63HN8 5207 aa10.28□□□□□ -0.76
RAB3IP-202ENST00000362025 VAMP3Q15836 100 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms