RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 TEP1Q99973 2627 aaKnown RBP13.15□□□□□ -0.3
CMTM3-201ENST00000361909 H7BZZ5 65 aa13.14□□□□□ -0.31
CMTM3-201ENST00000361909 TRGV4A0A0C4DH28 118 aa13.13□□□□□ -0.31
CMTM3-201ENST00000361909 ZNF561-AS1K7EIQ3 104 aa13.13□□□□□ -0.31
CMTM3-201ENST00000361909 PDE6GP18545 87 aa13.13□□□□□ -0.31
CMTM3-201ENST00000361909 Q6ZQT0 140 aa13.13□□□□□ -0.31
CMTM3-201ENST00000361909 ATRQ13535 2644 aa13.12□□□□□ -0.31
CMTM3-201ENST00000361909 LOC100131303A0A0U1RQF7 123 aa13.12□□□□□ -0.31
CMTM3-201ENST00000361909 PLAC8L1A1L4L8 177 aa13.12□□□□□ -0.31
CMTM3-201ENST00000361909 TENM1Q9UKZ4 2725 aa13.12□□□□□ -0.31
CMTM3-201ENST00000361909 RBM3P98179 157 aaKnown RBP13.11□□□□□ -0.31
CMTM3-201ENST00000361909 SPATA3Q8NHX4 192 aa13.11□□□□□ -0.31
CMTM3-201ENST00000361909 NDUFC1O43677 76 aa13.1□□□□□ -0.31
CMTM3-201ENST00000361909 ATP5EP56381 51 aaPredicted RBP13.1□□□□□ -0.31
CMTM3-201ENST00000361909 CXCL6P80162 114 aa13.1□□□□□ -0.31
CMTM3-201ENST00000361909 C6orf223Q8N319 242 aa13.1□□□□□ -0.31
CMTM3-201ENST00000361909 MUC7Q8TAX7 377 aa13.1□□□□□ -0.31
CMTM3-201ENST00000361909 A0A1B0GUV1 79 aa13.09□□□□□ -0.31
CMTM3-201ENST00000361909 LINC00575Q6W349 94 aa13.08□□□□□ -0.31
CMTM3-201ENST00000361909 WFDC10AQ9H1F0 79 aa13.08□□□□□ -0.31
CMTM3-201ENST00000361909 PRO0628Q9UI54 55 aa13.08□□□□□ -0.32
CMTM3-201ENST00000361909 GIG44P09565 113 aaPredicted RBP13.07□□□□□ -0.32
CMTM3-201ENST00000361909 LINC01547P58512 204 aaPredicted RBP13.06□□□□□ -0.32
CMTM3-201ENST00000361909 C11orf68Q9H3H3 251 aaKnown RBP13.06□□□□□ -0.32
CMTM3-201ENST00000361909 SMIM26A0A096LP01 95 aa13.05□□□□□ -0.32
CMTM3-201ENST00000361909 IGHV4-28A0A0C4DH34 117 aa13.05□□□□□ -0.32
CMTM3-201ENST00000361909 RPL35AP18077 110 aaKnown RBP13.04□□□□□ -0.32
CMTM3-201ENST00000361909 C6orf99Q4VX62 202 aa13.04□□□□□ -0.32
CMTM3-201ENST00000361909 VWFP04275 2813 aa13.03□□□□□ -0.32
CMTM3-201ENST00000361909 Q6ZVQ6 151 aa13.03□□□□□ -0.32
CMTM3-201ENST00000361909 CSNK1G2-AS1Q8NCQ2 148 aa13.03□□□□□ -0.32
CMTM3-201ENST00000361909 LAMTOR3Q9UHA4 124 aa13□□□□□ -0.33
CMTM3-201ENST00000361909 FBN1P35555 2871 aaKnown RBP13□□□□□ -0.33
CMTM3-201ENST00000361909 KIAA0087Q14695 138 aa13□□□□□ -0.33
CMTM3-201ENST00000361909 PRR3P79522 188 aaKnown RBP12.99□□□□□ -0.33
CMTM3-201ENST00000361909 NOTCH3Q9UM47 2321 aa12.99□□□□□ -0.33
CMTM3-201ENST00000361909 CD164L2Q6UWJ8 174 aa12.98□□□□□ -0.33
CMTM3-201ENST00000361909 HAMPP81172 84 aa12.98□□□□□ -0.33
CMTM3-201ENST00000361909 ERC2-IT1O76042 136 aa12.96□□□□□ -0.33
CMTM3-201ENST00000361909 MAST4O15021 2626 aa12.96□□□□□ -0.34
CMTM3-201ENST00000361909 F8WEM9 126 aa12.96□□□□□ -0.34
CMTM3-201ENST00000361909 TRAV10A0A0B4J240 114 aa12.94□□□□□ -0.34
CMTM3-201ENST00000361909 LINC00612Q8N6U2 182 aa12.94□□□□□ -0.34
CMTM3-201ENST00000361909 TRBV7-4A0A0J9YYF1 115 aa12.93□□□□□ -0.34
CMTM3-201ENST00000361909 APOC4P55056 127 aa12.93□□□□□ -0.34
CMTM3-201ENST00000361909 LINC00336Q6ZUF6 198 aa12.93□□□□□ -0.34
CMTM3-201ENST00000361909 IGLV6-57P01721 117 aa12.93□□□□□ -0.34
CMTM3-201ENST00000361909 EGFEM1PQ0D2K5 195 aa12.93□□□□□ -0.34
CMTM3-201ENST00000361909 RMI2Q96E14 147 aa12.93□□□□□ -0.34
CMTM3-201ENST00000361909 TRRAPQ9Y4A5 3859 aa12.92□□□□□ -0.34
CMTM3-201ENST00000361909 Q8N3U1 123 aa12.92□□□□□ -0.34
CMTM3-201ENST00000361909 GYPEP15421 78 aa12.91□□□□□ -0.34
CMTM3-201ENST00000361909 SNURFQ9Y675 71 aa12.91□□□□□ -0.34
CMTM3-201ENST00000361909 OXLD1Q5BKU9 147 aa12.91□□□□□ -0.34
CMTM3-201ENST00000361909 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.9□□□□□ -0.34
CMTM3-201ENST00000361909 FP248Q71RG6 208 aaPredicted RBP12.9□□□□□ -0.34
CMTM3-201ENST00000361909 CHCHD10Q8WYQ3 142 aaPredicted RBP12.9□□□□□ -0.34
CMTM3-201ENST00000361909 MIFP14174 115 aa12.89□□□□□ -0.35
CMTM3-201ENST00000361909 Q6ZQY7 126 aa12.89□□□□□ -0.35
CMTM3-201ENST00000361909 M0R2N4 97 aa12.88□□□□□ -0.35
CMTM3-201ENST00000361909 TRBV7-6A0A0J9YX20 115 aa12.88□□□□□ -0.35
CMTM3-201ENST00000361909 IGHV4-30-4P0DP06 118 aa12.87□□□□□ -0.35
CMTM3-201ENST00000361909 Q8NDZ9 215 aa12.87□□□□□ -0.35
CMTM3-201ENST00000361909 STAB1Q9NY15 2570 aa12.87□□□□□ -0.35
CMTM3-201ENST00000361909 CLPSL2Q6UWE3 100 aa12.87□□□□□ -0.35
CMTM3-201ENST00000361909 PRO0255Q9UI72 69 aa12.87□□□□□ -0.35
CMTM3-201ENST00000361909 A0A0J9YWU9 116 aa12.86□□□□□ -0.35
CMTM3-201ENST00000361909 KRTAP10-11P60412 298 aa12.86□□□□□ -0.35
CMTM3-201ENST00000361909 NREPQ16612 68 aa12.86□□□□□ -0.35
CMTM3-201ENST00000361909 X6R8D5 127 aa12.86□□□□□ -0.35
CMTM3-201ENST00000361909 DIRC1Q969H9 104 aa12.85□□□□□ -0.35
CMTM3-201ENST00000361909 LINC00269Q8N2A0 174 aa12.84□□□□□ -0.35
CMTM3-201ENST00000361909 C9orf116Q5BN46 136 aaPredicted RBP12.84□□□□□ -0.35
CMTM3-201ENST00000361909 TM2D3Q9BRN9 247 aa12.84□□□□□ -0.35
CMTM3-201ENST00000361909 TMEM254Q8TBM7 123 aa12.83□□□□□ -0.36
CMTM3-201ENST00000361909 DEFB130BP0DP73 79 aa12.83□□□□□ -0.36
CMTM3-201ENST00000361909 DEFB130AP0DP74 79 aa12.83□□□□□ -0.36
CMTM3-201ENST00000361909 REG3AQ06141 175 aa12.83□□□□□ -0.36
CMTM3-201ENST00000361909 COL6A5A8TX70 2615 aa12.82□□□□□ -0.36
CMTM3-201ENST00000361909 GVQW2A0A096LPI5 108 aaPredicted RBP12.81□□□□□ -0.36
CMTM3-201ENST00000361909 DEFB135Q30KP9 77 aa12.81□□□□□ -0.36
CMTM3-201ENST00000361909 SPAG11BQ08648 103 aa12.81□□□□□ -0.36
CMTM3-201ENST00000361909 BPY2O14599 106 aa12.8□□□□□ -0.36
CMTM3-201ENST00000361909 COX7BP24311 80 aa12.8□□□□□ -0.36
CMTM3-201ENST00000361909 C1orf43Q9BWL3 253 aa12.8□□□□□ -0.36
CMTM3-201ENST00000361909 ANGP03950 147 aaKnown RBP12.79□□□□□ -0.36
CMTM3-201ENST00000361909 LYRM9A8MSI8 78 aa12.77□□□□□ -0.36
CMTM3-201ENST00000361909 ELOF1P60002 83 aaKnown RBP12.77□□□□□ -0.36
CMTM3-201ENST00000361909 UNQ6190/PRO20217Q6UXQ8 127 aa12.76□□□□□ -0.37
CMTM3-201ENST00000361909 PRYO14603 147 aa12.75□□□□□ -0.37
CMTM3-201ENST00000361909 ZNF73O43830 326 aaPredicted RBP12.75□□□□□ -0.37
CMTM3-201ENST00000361909 IGLV10-54A0A075B6I4 117 aa12.74□□□□□ -0.37
CMTM3-201ENST00000361909 C10orf25Q5T742 122 aa12.74□□□□□ -0.37
CMTM3-201ENST00000361909 Q8NAQ8 132 aa12.74□□□□□ -0.37
CMTM3-201ENST00000361909 A0A0U1RQV1 116 aa12.73□□□□□ -0.37
CMTM3-201ENST00000361909 MDFIQ99750 246 aa12.73□□□□□ -0.37
CMTM3-201ENST00000361909 SCXQ7RTU7 201 aa12.73□□□□□ -0.37
CMTM3-201ENST00000361909 LINC00474Q9P2X8 69 aa12.73□□□□□ -0.37
CMTM3-201ENST00000361909 CMYA5Q8N3K9 4069 aa12.72□□□□□ -0.37
CMTM3-201ENST00000361909 OCR1Q9BZK8 76 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms