RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 SPRR4Q96PI1 79 aa9.9□□□□□ -0.82
COL9A1-203ENST00000360859 COX19Q49B96 90 aa9.89□□□□□ -0.83
COL9A1-203ENST00000360859 SFTA2Q6UW10 78 aa9.88□□□□□ -0.83
COL9A1-203ENST00000360859 UQCC3Q6UW78 93 aa9.88□□□□□ -0.83
COL9A1-203ENST00000360859 C11orf86A6NJI1 115 aa9.87□□□□□ -0.83
COL9A1-203ENST00000360859 FP248Q71RG6 208 aaPredicted RBP9.87□□□□□ -0.83
COL9A1-203ENST00000360859 TMEM170BQ5T4T1 132 aa9.86□□□□□ -0.83
COL9A1-203ENST00000360859 URB1-AS1Q96HZ7 61 aa9.86□□□□□ -0.83
COL9A1-203ENST00000360859 LINC00158P58513 81 aa9.85□□□□□ -0.83
COL9A1-203ENST00000360859 C4orf48Q5BLP8 95 aa9.85□□□□□ -0.83
COL9A1-203ENST00000360859 ZNF706Q9Y5V0 76 aaPredicted RBP9.85□□□□□ -0.83
COL9A1-203ENST00000360859 HBDP02042 147 aa9.84□□□□□ -0.83
COL9A1-203ENST00000360859 LINC00614P0C842 121 aa9.84□□□□□ -0.83
COL9A1-203ENST00000360859 PMCHL1Q16048 86 aa9.84□□□□□ -0.83
COL9A1-203ENST00000360859 KRTAP13-3Q3SY46 172 aa9.84□□□□□ -0.83
COL9A1-203ENST00000360859 BAGE3Q86Y29 109 aa9.84□□□□□ -0.83
COL9A1-203ENST00000360859 LINC00337Q8N6G1 96 aa9.84□□□□□ -0.83
COL9A1-203ENST00000360859 DAND5Q8N907 189 aa9.84□□□□□ -0.83
COL9A1-203ENST00000360859 Q8NBF4 154 aa9.84□□□□□ -0.83
COL9A1-203ENST00000360859 SEC11CQ9BY50 192 aa9.84□□□□□ -0.83
COL9A1-203ENST00000360859 C18orf32Q8TCD1 76 aa9.83□□□□□ -0.84
COL9A1-203ENST00000360859 A0A0U1RRA0 63 aa9.82□□□□□ -0.84
COL9A1-203ENST00000360859 ASB16-AS1Q495Z4 193 aa9.81□□□□□ -0.84
COL9A1-203ENST00000360859 PRYO14603 147 aa9.8□□□□□ -0.84
COL9A1-203ENST00000360859 SPRR1AP35321 89 aa9.79□□□□□ -0.84
COL9A1-203ENST00000360859 SMCR5Q8TEV8 140 aa9.79□□□□□ -0.84
COL9A1-203ENST00000360859 SPINK1P00995 79 aa9.78□□□□□ -0.84
COL9A1-203ENST00000360859 BOD1L2Q8IYS8 172 aa9.78□□□□□ -0.84
COL9A1-203ENST00000360859 KCNQ1DNQ9H478 68 aa9.78□□□□□ -0.84
COL9A1-203ENST00000360859 CHTOPQ9Y3Y2 248 aaKnown RBP9.78□□□□□ -0.84
COL9A1-203ENST00000360859 TRAPPC1Q9Y5R8 145 aa9.78□□□□□ -0.84
COL9A1-203ENST00000360859 TMEM223A0PJW6 202 aa9.77□□□□□ -0.85
COL9A1-203ENST00000360859 KRTAP4-16G5E9R7 235 aaPredicted RBP9.77□□□□□ -0.85
COL9A1-203ENST00000360859 NCR3O14931 201 aa9.77□□□□□ -0.85
COL9A1-203ENST00000360859 SMIM13P0DJ93 91 aa9.77□□□□□ -0.85
COL9A1-203ENST00000360859 RPS10P5Q9NQ39 176 aa9.77□□□□□ -0.85
COL9A1-203ENST00000360859 ATP6V1G1O75348 118 aa9.76□□□□□ -0.85
COL9A1-203ENST00000360859 LINC01547P58512 204 aaPredicted RBP9.76□□□□□ -0.85
COL9A1-203ENST00000360859 RHEBQ15382 184 aa9.76□□□□□ -0.85
COL9A1-203ENST00000360859 KRTAP4-1Q9BYQ7 146 aa9.76□□□□□ -0.85
COL9A1-203ENST00000360859 ETDCA0A1B0GVM5 59 aa9.75□□□□□ -0.85
COL9A1-203ENST00000360859 LINC00483Q53H64 154 aa9.75□□□□□ -0.85
COL9A1-203ENST00000360859 SEC61BP60468 96 aaKnown RBP9.74□□□□□ -0.85
COL9A1-203ENST00000360859 IFITM2Q01629 132 aa9.74□□□□□ -0.85
COL9A1-203ENST00000360859 C10orf91Q5T1B1 145 aa9.74□□□□□ -0.85
COL9A1-203ENST00000360859 MIR7-3HGQ8N6C7 128 aa9.74□□□□□ -0.85
COL9A1-203ENST00000360859 TRBV10-3A0A0K0K1G6 114 aa9.73□□□□□ -0.85
COL9A1-203ENST00000360859 MEIG1Q5JSS6 88 aa9.73□□□□□ -0.85
COL9A1-203ENST00000360859 TRAV12-1A0A0B4J245 112 aa9.72□□□□□ -0.85
COL9A1-203ENST00000360859 GAGE2AQ6NT46 116 aa9.72□□□□□ -0.85
COL9A1-203ENST00000360859 COMMD7Q86VX2 200 aa9.72□□□□□ -0.85
COL9A1-203ENST00000360859 MOBPQ13875 183 aa9.71□□□□□ -0.86
COL9A1-203ENST00000360859 ERC2-IT1O76042 136 aa9.7□□□□□ -0.86
COL9A1-203ENST00000360859 HERV-K104P63124 156 aa9.7□□□□□ -0.86
COL9A1-203ENST00000360859 Q8N377 158 aa9.7□□□□□ -0.86
COL9A1-203ENST00000360859 IFI27L1Q96BM0 104 aa9.7□□□□□ -0.86
COL9A1-203ENST00000360859 NDUFA12Q9UI09 145 aa9.7□□□□□ -0.86
COL9A1-203ENST00000360859 IGLV9-49A0A0B4J1Y8 123 aa9.69□□□□□ -0.86
COL9A1-203ENST00000360859 B5MCH6 92 aa9.69□□□□□ -0.86
COL9A1-203ENST00000360859 RPS29P62273 56 aaKnown RBP9.69□□□□□ -0.86
COL9A1-203ENST00000360859 LINC00587B1AMM8 73 aa9.68□□□□□ -0.86
COL9A1-203ENST00000360859 LCE2DQ5TA82 110 aaPredicted RBP9.68□□□□□ -0.86
COL9A1-203ENST00000360859 SSBP3-AS1Q7Z2R9 100 aa9.68□□□□□ -0.86
COL9A1-203ENST00000360859 S100A12P80511 92 aa9.67□□□□□ -0.86
COL9A1-203ENST00000360859 FAM19A2Q8N3H0 131 aa9.67□□□□□ -0.86
COL9A1-203ENST00000360859 SLC25A20O43772 301 aa9.66□□□□□ -0.86
COL9A1-203ENST00000360859 MAP1LC3CQ9BXW4 147 aa9.66□□□□□ -0.86
COL9A1-203ENST00000360859 MYMXA0A1B0GTQ4 84 aa9.65□□□□□ -0.86
COL9A1-203ENST00000360859 CHCHD1Q96BP2 118 aaKnown RBP9.65□□□□□ -0.86
COL9A1-203ENST00000360859 Q9BRP9 147 aa9.65□□□□□ -0.86
COL9A1-203ENST00000360859 XP32Q5T750 250 aa9.64□□□□□ -0.87
COL9A1-203ENST00000360859 LOC107984156A0A0G2JMH3 177 aa9.63□□□□□ -0.87
COL9A1-203ENST00000360859 DDTP30046 118 aa9.63□□□□□ -0.87
COL9A1-203ENST00000360859 Q6ZRX8 168 aa9.63□□□□□ -0.87
COL9A1-203ENST00000360859 ARL17AQ8IVW1 177 aa9.63□□□□□ -0.87
COL9A1-203ENST00000360859 TRBV10-2A0A0K0K1G8 114 aa9.62□□□□□ -0.87
COL9A1-203ENST00000360859 TSPEAR-AS2P59090 65 aa9.62□□□□□ -0.87
COL9A1-203ENST00000360859 SPANXB1Q9NS25 103 aaPredicted RBP9.59□□□□□ -0.87
COL9A1-203ENST00000360859 FSIP2Q5CZC0 6907 aa9.59□□□□□ -0.87
COL9A1-203ENST00000360859 H0Y8G0 127 aa9.58□□□□□ -0.88
COL9A1-203ENST00000360859 APOC3P02656 99 aa9.58□□□□□ -0.88
COL9A1-203ENST00000360859 LCE2CQ5TA81 110 aa9.58□□□□□ -0.88
COL9A1-203ENST00000360859 LEPROTO15243 131 aa9.57□□□□□ -0.88
COL9A1-203ENST00000360859 IGLV6-57P01721 117 aa9.57□□□□□ -0.88
COL9A1-203ENST00000360859 C9orf153Q5TBE3 101 aa9.57□□□□□ -0.88
COL9A1-203ENST00000360859 HSBP1O75506 76 aa9.56□□□□□ -0.88
COL9A1-203ENST00000360859 S100A7L2Q5SY68 101 aa9.56□□□□□ -0.88
COL9A1-203ENST00000360859 YPEL4Q96NS1 127 aa9.56□□□□□ -0.88
COL9A1-203ENST00000360859 CRCT1Q9UGL9 99 aa9.56□□□□□ -0.88
COL9A1-203ENST00000360859 SNAPINO95295 136 aa9.55□□□□□ -0.88
COL9A1-203ENST00000360859 JOSD1Q15040 202 aaPredicted RBP9.55□□□□□ -0.88
COL9A1-203ENST00000360859 MIEN1Q9BRT3 115 aa9.55□□□□□ -0.88
COL9A1-203ENST00000360859 TRAV23DV6A0A075B6W5 121 aa9.54□□□□□ -0.88
COL9A1-203ENST00000360859 J3QQQ9 107 aa9.54□□□□□ -0.88
COL9A1-203ENST00000360859 NDUFC2O95298 119 aa9.54□□□□□ -0.88
COL9A1-203ENST00000360859 SVBPQ8N300 66 aa9.54□□□□□ -0.88
COL9A1-203ENST00000360859 ST20-AS1Q8NBB2 130 aa9.53□□□□□ -0.88
COL9A1-203ENST00000360859 PLNP26678 52 aa9.52□□□□□ -0.89
COL9A1-203ENST00000360859 KRTAP19-2Q3LHN2 52 aa9.52□□□□□ -0.89
COL9A1-203ENST00000360859 ZNF73O43830 326 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms