RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 GFRA4Q9GZZ7 299 aa3.47□□□□□ -1.85
CDC42SE2-201ENST00000360515 UBE2L3P68036 154 aaKnown RBP3.47□□□□□ -1.85
CDC42SE2-201ENST00000360515 HBBP68871 147 aa3.47□□□□□ -1.85
CDC42SE2-201ENST00000360515 EPDR1Q9UM22 224 aa3.47□□□□□ -1.85
CDC42SE2-201ENST00000360515 A0A1W2PNN7 141 aa3.47□□□□□ -1.85
CDC42SE2-201ENST00000360515 C9orf153Q5TBE3 101 aa3.47□□□□□ -1.85
CDC42SE2-201ENST00000360515 FAM231DQ6ZW35 169 aa3.47□□□□□ -1.85
CDC42SE2-201ENST00000360515 GATD1Q8NB37 220 aa3.47□□□□□ -1.85
CDC42SE2-201ENST00000360515 M0QY20 66 aa3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 PSMB2P49721 201 aa3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 TAL2Q16559 108 aa3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 GOLT1AQ6ZVE7 132 aa3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 TTTY13Q9BZ97 58 aa3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 TMSB15BA0A087X1C1 80 aa3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 C4orf26Q17RF5 130 aa3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 KRTAP13-3Q3SY46 172 aa3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 HRCT1Q6UXD1 115 aa3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 ANKRD29Q8N6D5 301 aa3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 JPT2Q9H910 190 aa3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 IGKV2D-26A0A0A0MRZ7 120 aa3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 RPS29P62273 56 aaKnown RBP3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 Q86TA4 180 aa3.46□□□□□ -1.86
CDC42SE2-201ENST00000360515 IGHV3-73A0A0B4J1V6 119 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 TINCRA0A1B0GVN0 87 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 CRYGAP11844 174 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 XP32Q5T750 250 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 ZC2HC1BQ5TFG8 222 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 KRTAP13-1Q8IUC0 172 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 C3orf22Q8N5N4 141 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 SPANXCQ9NY87 97 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 IGLV4-60A0A075B6I1 120 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 ARMS2P0C7Q2 107 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 CNFNQ9BYD5 112 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 A0A096LNJ9 63 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 SCGB1C2P0DMR2 95 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 KRTAP7-1Q8IUC3 87 aa3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 MRPL35Q9NZE8 188 aaKnown RBP3.45□□□□□ -1.86
CDC42SE2-201ENST00000360515 IGLV4-69A0A075B6H9 119 aa3.44□□□□□ -1.86
CDC42SE2-201ENST00000360515 LOC107984156A0A0G2JMH3 177 aa3.44□□□□□ -1.86
CDC42SE2-201ENST00000360515 H3BVH4 76 aa3.44□□□□□ -1.86
CDC42SE2-201ENST00000360515 FCER1GP30273 86 aa3.44□□□□□ -1.86
CDC42SE2-201ENST00000360515 ARL17AQ8IVW1 177 aa3.44□□□□□ -1.86
CDC42SE2-201ENST00000360515 FMC1Q96HJ9 113 aa3.44□□□□□ -1.86
CDC42SE2-201ENST00000360515 HIST1H4GQ99525 98 aa3.44□□□□□ -1.86
CDC42SE2-201ENST00000360515 TMEM243Q9BU79 118 aa3.44□□□□□ -1.86
CDC42SE2-201ENST00000360515 TMEM167BQ9NRX6 74 aa3.44□□□□□ -1.86
CDC42SE2-201ENST00000360515 PRO0628Q9UI54 55 aa3.44□□□□□ -1.86
CDC42SE2-201ENST00000360515 UQCRQO14949 82 aa3.44□□□□□ -1.86
CDC42SE2-201ENST00000360515 MALP21145 153 aa3.44□□□□□ -1.86
CDC42SE2-201ENST00000360515 PRR4Q16378 134 aa3.44□□□□□ -1.86
CDC42SE2-201ENST00000360515 A0A087WWL8 130 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 FAM236AA0A1B0GUQ0 79 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 FAM236BA0A1B0GV22 79 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 Q5XG85 94 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 LINC01561Q8N1V8 128 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 IFI27L1Q96BM0 104 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 MYMXA0A1B0GTQ4 84 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 ZNF861PO60384 105 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 ATP5LO75964 103 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 LYRM7Q5U5X0 104 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 KRTAP11-1Q8IUC1 163 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 TCL1BO95988 128 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 SYCNQ0VAF6 134 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 SFTA2Q6UW10 78 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 CD164L2Q6UWJ8 174 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 V9GYY9 64 aa3.43□□□□□ -1.86
CDC42SE2-201ENST00000360515 LINC01549A6NIU2 74 aa3.42□□□□□ -1.86
CDC42SE2-201ENST00000360515 SH2D1AO60880 128 aa3.42□□□□□ -1.86
CDC42SE2-201ENST00000360515 IFI27P40305 119 aaPredicted RBP3.42□□□□□ -1.86
CDC42SE2-201ENST00000360515 GAGE2AQ6NT46 116 aa3.42□□□□□ -1.86
CDC42SE2-201ENST00000360515 TRBV6-5A0A0K0K1A5 114 aa3.42□□□□□ -1.86
CDC42SE2-201ENST00000360515 NPYP01303 97 aa3.42□□□□□ -1.86
CDC42SE2-201ENST00000360515 CHCHD10Q8WYQ3 142 aaPredicted RBP3.42□□□□□ -1.86
CDC42SE2-201ENST00000360515 DPH3Q96FX2 82 aa3.42□□□□□ -1.86
CDC42SE2-201ENST00000360515 TRBV7-7A0A0K0K1E9 115 aa3.42□□□□□ -1.86
CDC42SE2-201ENST00000360515 HBDP02042 147 aa3.42□□□□□ -1.86
CDC42SE2-201ENST00000360515 PHLDA3Q9Y5J5 127 aa3.42□□□□□ -1.86
CDC42SE2-201ENST00000360515 SLC25A20O43772 301 aa3.41□□□□□ -1.86
CDC42SE2-201ENST00000360515 SEC61BP60468 96 aaKnown RBP3.41□□□□□ -1.86
CDC42SE2-201ENST00000360515 C1orf137Q5JT78 98 aa3.41□□□□□ -1.86
CDC42SE2-201ENST00000360515 CT83Q5H943 113 aa3.41□□□□□ -1.86
CDC42SE2-201ENST00000360515 LOC389332A0A1B0GUA5 103 aa3.41□□□□□ -1.86
CDC42SE2-201ENST00000360515 IGKCP01834 107 aa3.41□□□□□ -1.86
CDC42SE2-201ENST00000360515 PMVKQ15126 192 aa3.41□□□□□ -1.86
CDC42SE2-201ENST00000360515 C19orf71A6NCJ1 209 aa3.4□□□□□ -1.86
CDC42SE2-201ENST00000360515 F5H697 171 aa3.4□□□□□ -1.86
CDC42SE2-201ENST00000360515 SPAG11AQ6PDA7 123 aa3.4□□□□□ -1.86
CDC42SE2-201ENST00000360515 SPANXDQ9BXN6 97 aa3.4□□□□□ -1.86
CDC42SE2-201ENST00000360515 IGLV5-37A0A075B6J1 123 aa3.4□□□□□ -1.87
CDC42SE2-201ENST00000360515 UBE2D1P51668 147 aa3.4□□□□□ -1.87
CDC42SE2-201ENST00000360515 ZNF56Q15929 161 aa3.4□□□□□ -1.87
CDC42SE2-201ENST00000360515 KRTAP13-2Q52LG2 175 aa3.4□□□□□ -1.87
CDC42SE2-201ENST00000360515 C9orf116Q5BN46 136 aaPredicted RBP3.4□□□□□ -1.87
CDC42SE2-201ENST00000360515 AMN1Q8IY45 258 aa3.4□□□□□ -1.87
CDC42SE2-201ENST00000360515 TIMM21Q9BVV7 248 aa3.4□□□□□ -1.87
CDC42SE2-201ENST00000360515 PYGO1Q9Y3Y4 419 aa3.4□□□□□ -1.87
CDC42SE2-201ENST00000360515 LINC00959A0A1B0GUT2 108 aa3.4□□□□□ -1.87
CDC42SE2-201ENST00000360515 PEX7O00628 323 aa3.4□□□□□ -1.87
CDC42SE2-201ENST00000360515 COX7CP15954 63 aa3.4□□□□□ -1.87
CDC42SE2-201ENST00000360515 IMUPQ9GZP8 106 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms