RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 LAMTOR3Q9UHA4 124 aa6.51□□□□□ -1.37
SMARCAL1-202ENST00000358207 IGLV5-45A0A087WSX0 123 aa6.51□□□□□ -1.37
SMARCAL1-202ENST00000358207 M0R2N4 97 aa6.51□□□□□ -1.37
SMARCAL1-202ENST00000358207 LINC01547P58512 204 aaPredicted RBP6.51□□□□□ -1.37
SMARCAL1-202ENST00000358207 USMG5Q96IX5 58 aa6.51□□□□□ -1.37
SMARCAL1-202ENST00000358207 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.51□□□□□ -1.37
SMARCAL1-202ENST00000358207 PF4P02776 101 aa6.51□□□□□ -1.37
SMARCAL1-202ENST00000358207 TMEM254Q8TBM7 123 aa6.51□□□□□ -1.37
SMARCAL1-202ENST00000358207 H0YGX0 51 aa6.5□□□□□ -1.37
SMARCAL1-202ENST00000358207 HTN1P15515 57 aa6.5□□□□□ -1.37
SMARCAL1-202ENST00000358207 KRTAP10-3P60369 221 aa6.5□□□□□ -1.37
SMARCAL1-202ENST00000358207 MEGF8Q7Z7M0 2845 aa6.5□□□□□ -1.37
SMARCAL1-202ENST00000358207 Q8N3U1 123 aa6.5□□□□□ -1.37
SMARCAL1-202ENST00000358207 LINC01006Q8NI28 216 aa6.5□□□□□ -1.37
SMARCAL1-202ENST00000358207 CHCHD7Q9BUK0 85 aa6.49□□□□□ -1.37
SMARCAL1-202ENST00000358207 NDUFA4O00483 81 aa6.49□□□□□ -1.37
SMARCAL1-202ENST00000358207 PSPHP1O15172 72 aa6.49□□□□□ -1.37
SMARCAL1-202ENST00000358207 PRM2P04554 102 aa6.49□□□□□ -1.37
SMARCAL1-202ENST00000358207 UBE2E2Q96LR5 201 aa6.48□□□□□ -1.37
SMARCAL1-202ENST00000358207 SMIM1B2RUZ4 78 aa6.48□□□□□ -1.37
SMARCAL1-202ENST00000358207 HAMPP81172 84 aa6.48□□□□□ -1.37
SMARCAL1-202ENST00000358207 Q1T7F1 81 aa6.48□□□□□ -1.37
SMARCAL1-202ENST00000358207 SND1-IT1Q9HBX3 110 aa6.48□□□□□ -1.37
SMARCAL1-202ENST00000358207 IGHV3-16A0A0C4DH30 117 aa6.47□□□□□ -1.37
SMARCAL1-202ENST00000358207 LINC00467Q9BRT7 94 aa6.47□□□□□ -1.37
SMARCAL1-202ENST00000358207 IGHV3-73A0A0B4J1V6 119 aa6.47□□□□□ -1.37
SMARCAL1-202ENST00000358207 JMJD7-PLA2G4BH0Y9G9 81 aa6.47□□□□□ -1.37
SMARCAL1-202ENST00000358207 K7EQG2 157 aa6.47□□□□□ -1.37
SMARCAL1-202ENST00000358207 FUSP35637 526 aaKnown RBP eCLIP6.47□□□□□ -1.37
SMARCAL1-202ENST00000358207 NREPQ16612 68 aa6.47□□□□□ -1.37
SMARCAL1-202ENST00000358207 C11orf68Q9H3H3 251 aaKnown RBP6.47□□□□□ -1.37
SMARCAL1-202ENST00000358207 KLLNB2CW77 178 aa6.46□□□□□ -1.37
SMARCAL1-202ENST00000358207 LINC00242Q5T6M2 205 aa6.46□□□□□ -1.37
SMARCAL1-202ENST00000358207 IGHV3OR16-12A0A075B7B8 117 aa6.46□□□□□ -1.38
SMARCAL1-202ENST00000358207 hDV103S1A0JD37 113 aa6.46□□□□□ -1.38
SMARCAL1-202ENST00000358207 PRKDCP78527 4128 aaKnown RBP6.46□□□□□ -1.38
SMARCAL1-202ENST00000358207 Q6ZVQ6 151 aa6.46□□□□□ -1.38
SMARCAL1-202ENST00000358207 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
SMARCAL1-202ENST00000358207 LINC00588Q9Y4M8 146 aa6.46□□□□□ -1.38
SMARCAL1-202ENST00000358207 H3BUA1 57 aa6.45□□□□□ -1.38
SMARCAL1-202ENST00000358207 PRYO14603 147 aa6.45□□□□□ -1.38
SMARCAL1-202ENST00000358207 APOC4P55056 127 aa6.45□□□□□ -1.38
SMARCAL1-202ENST00000358207 LINC00167Q96N53 147 aa6.45□□□□□ -1.38
SMARCAL1-202ENST00000358207 WFDC10AQ9H1F0 79 aa6.45□□□□□ -1.38
SMARCAL1-202ENST00000358207 DYNLRB2Q8TF09 96 aa6.44□□□□□ -1.38
SMARCAL1-202ENST00000358207 CCL24O00175 119 aa6.44□□□□□ -1.38
SMARCAL1-202ENST00000358207 SPINK13Q1W4C9 94 aa6.44□□□□□ -1.38
SMARCAL1-202ENST00000358207 SCXQ7RTU7 201 aa6.44□□□□□ -1.38
SMARCAL1-202ENST00000358207 DYNC2H1Q8NCM8 4307 aaKnown RBP6.44□□□□□ -1.38
SMARCAL1-202ENST00000358207 TRAV22A0A0B4J277 110 aa6.44□□□□□ -1.38
SMARCAL1-202ENST00000358207 TRBV10-1A0A0K0K1A3 114 aa6.44□□□□□ -1.38
SMARCAL1-202ENST00000358207 M0R378 163 aa6.44□□□□□ -1.38
SMARCAL1-202ENST00000358207 CCL18P55774 89 aa6.44□□□□□ -1.38
SMARCAL1-202ENST00000358207 DEFB131AP59861 70 aa6.44□□□□□ -1.38
SMARCAL1-202ENST00000358207 Q6ZQT0 140 aa6.44□□□□□ -1.38
SMARCAL1-202ENST00000358207 DGAT2L7PQ6IED9 249 aa6.43□□□□□ -1.38
SMARCAL1-202ENST00000358207 EGFEM1PQ0D2K5 195 aa6.42□□□□□ -1.38
SMARCAL1-202ENST00000358207 SYCNQ0VAF6 134 aa6.42□□□□□ -1.38
SMARCAL1-202ENST00000358207 Q6ZSN1 163 aa6.42□□□□□ -1.38
SMARCAL1-202ENST00000358207 KLK9Q2XQG4 91 aa6.41□□□□□ -1.38
SMARCAL1-202ENST00000358207 HIGD2AQ9BW72 106 aa6.41□□□□□ -1.38
SMARCAL1-202ENST00000358207 ERC2-IT1O76042 136 aa6.41□□□□□ -1.38
SMARCAL1-202ENST00000358207 Q8N814 137 aa6.41□□□□□ -1.38
SMARCAL1-202ENST00000358207 H3BS24 57 aa6.41□□□□□ -1.38
SMARCAL1-202ENST00000358207 TMEM256-PLSCR3K7ERE1 68 aa6.41□□□□□ -1.38
SMARCAL1-202ENST00000358207 BPY2O14599 106 aa6.41□□□□□ -1.38
SMARCAL1-202ENST00000358207 C1orf64Q8NEQ6 169 aa6.41□□□□□ -1.38
SMARCAL1-202ENST00000358207 C4orf3Q8WVX3 66 aa6.41□□□□□ -1.38
SMARCAL1-202ENST00000358207 CXCL6P80162 114 aa6.4□□□□□ -1.38
SMARCAL1-202ENST00000358207 A8MUN3 132 aa6.4□□□□□ -1.39
SMARCAL1-202ENST00000358207 CD164L2Q6UWJ8 174 aa6.39□□□□□ -1.39
SMARCAL1-202ENST00000358207 OCR1Q9BZK8 76 aa6.39□□□□□ -1.39
SMARCAL1-202ENST00000358207 DNAH9Q9NYC9 4486 aa6.38□□□□□ -1.39
SMARCAL1-202ENST00000358207 C8orf87E5RJ46 101 aa6.38□□□□□ -1.39
SMARCAL1-202ENST00000358207 K7EMT4 169 aa6.38□□□□□ -1.39
SMARCAL1-202ENST00000358207 LINC00158P58513 81 aa6.38□□□□□ -1.39
SMARCAL1-202ENST00000358207 NANOS2P60321 138 aaKnown RBP6.38□□□□□ -1.39
SMARCAL1-202ENST00000358207 C16orf90A8MZG2 172 aa6.37□□□□□ -1.39
SMARCAL1-202ENST00000358207 DEFB114Q30KQ6 69 aa6.37□□□□□ -1.39
SMARCAL1-202ENST00000358207 LOC110117498A0A087WWA1 95 aa6.36□□□□□ -1.39
SMARCAL1-202ENST00000358207 FAM19A3Q7Z5A8 133 aa6.36□□□□□ -1.39
SMARCAL1-202ENST00000358207 TENM3Q9P273 2699 aa6.36□□□□□ -1.39
SMARCAL1-202ENST00000358207 TRBV6-4A0A1B0GX49 114 aa6.36□□□□□ -1.39
SMARCAL1-202ENST00000358207 Q5VV11 94 aa6.36□□□□□ -1.39
SMARCAL1-202ENST00000358207 NTM-AS1Q6ZSK4 140 aa6.36□□□□□ -1.39
SMARCAL1-202ENST00000358207 Q8N9L7 120 aa6.36□□□□□ -1.39
SMARCAL1-202ENST00000358207 DNAH7Q8WXX0 4024 aa6.35□□□□□ -1.39
SMARCAL1-202ENST00000358207 MAP6D1Q9H9H5 199 aa6.35□□□□□ -1.39
SMARCAL1-202ENST00000358207 ZNF73O43830 326 aaPredicted RBP6.34□□□□□ -1.39
SMARCAL1-202ENST00000358207 UBE2BP63146 152 aa6.34□□□□□ -1.39
SMARCAL1-202ENST00000358207 PRR3P79522 188 aaKnown RBP6.34□□□□□ -1.39
SMARCAL1-202ENST00000358207 ODF3L2Q3SX64 289 aa6.34□□□□□ -1.39
SMARCAL1-202ENST00000358207 COX7B2Q8TF08 81 aa6.34□□□□□ -1.39
SMARCAL1-202ENST00000358207 TOMM7Q9P0U1 55 aa6.34□□□□□ -1.39
SMARCAL1-202ENST00000358207 LINC00269Q8N2A0 174 aa6.33□□□□□ -1.4
SMARCAL1-202ENST00000358207 SPTSSBQ8NFR3 76 aa6.33□□□□□ -1.4
SMARCAL1-202ENST00000358207 A6NN06 94 aa6.33□□□□□ -1.4
SMARCAL1-202ENST00000358207 PSCAO43653 123 aa6.32□□□□□ -1.4
SMARCAL1-202ENST00000358207 PHF5AQ7RTV0 110 aaKnown RBP6.32□□□□□ -1.4
SMARCAL1-202ENST00000358207 DNAH1Q9P2D7 4330 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms