RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 C2orf48Q96LS8 159 aa13.91□□□□□ -0.18
COL13A1-202ENST00000357811 A0A1B0GX51 115 aa13.9□□□□□ -0.18
COL13A1-202ENST00000357811 Q8NAQ8 132 aa13.9□□□□□ -0.18
COL13A1-202ENST00000357811 APOC4P55056 127 aa13.89□□□□□ -0.19
COL13A1-202ENST00000357811 Q8N814 137 aa13.89□□□□□ -0.19
COL13A1-202ENST00000357811 XAGE1AQ9HD64 81 aa13.89□□□□□ -0.19
COL13A1-202ENST00000357811 CYSRT1A8MQ03 144 aa13.88□□□□□ -0.19
COL13A1-202ENST00000357811 RPL18AQ02543 176 aaKnown RBP13.88□□□□□ -0.19
COL13A1-202ENST00000357811 DSCR8Q96T75 97 aa13.88□□□□□ -0.19
COL13A1-202ENST00000357811 ATOX1O00244 68 aa13.88□□□□□ -0.19
COL13A1-202ENST00000357811 CRYGAP11844 174 aa13.88□□□□□ -0.19
COL13A1-202ENST00000357811 WFDC9Q8NEX5 89 aa13.87□□□□□ -0.19
COL13A1-202ENST00000357811 IGHV4-30-4P0DP06 118 aa13.86□□□□□ -0.19
COL13A1-202ENST00000357811 F8P00451 2351 aa13.86□□□□□ -0.19
COL13A1-202ENST00000357811 RETNQ9HD89 108 aa13.86□□□□□ -0.19
COL13A1-202ENST00000357811 MAST4O15021 2626 aa13.86□□□□□ -0.19
COL13A1-202ENST00000357811 SPART-AS1P0CW21 52 aa13.85□□□□□ -0.19
COL13A1-202ENST00000357811 FBN1P35555 2871 aaKnown RBP13.85□□□□□ -0.19
COL13A1-202ENST00000357811 OBSCN-AS1Q96MR7 158 aa13.84□□□□□ -0.19
COL13A1-202ENST00000357811 HIST1H4AP62805 103 aaKnown RBP13.83□□□□□ -0.2
COL13A1-202ENST00000357811 HIGD2BQ4VC39 106 aa13.83□□□□□ -0.2
COL13A1-202ENST00000357811 LINC01561Q8N1V8 128 aa13.82□□□□□ -0.2
COL13A1-202ENST00000357811 DPH3Q96FX2 82 aa13.82□□□□□ -0.2
COL13A1-202ENST00000357811 COX17Q14061 63 aa13.81□□□□□ -0.2
COL13A1-202ENST00000357811 C4orf26Q17RF5 130 aa13.81□□□□□ -0.2
COL13A1-202ENST00000357811 ENHOQ6UWT2 76 aa13.81□□□□□ -0.2
COL13A1-202ENST00000357811 OXLD1Q5BKU9 147 aa13.8□□□□□ -0.2
COL13A1-202ENST00000357811 LELP1Q5T871 98 aa13.8□□□□□ -0.2
COL13A1-202ENST00000357811 MIFP14174 115 aa13.8□□□□□ -0.2
COL13A1-202ENST00000357811 RPS28P62857 69 aaKnown RBP13.8□□□□□ -0.2
COL13A1-202ENST00000357811 NDUFC2O95298 119 aa13.79□□□□□ -0.2
COL13A1-202ENST00000357811 HRCT1Q6UXD1 115 aa13.78□□□□□ -0.2
COL13A1-202ENST00000357811 WFDC10BQ8IUB3 73 aa13.78□□□□□ -0.2
COL13A1-202ENST00000357811 CCKP06307 115 aa13.77□□□□□ -0.2
COL13A1-202ENST00000357811 ANK2Q01484 3957 aa13.77□□□□□ -0.21
COL13A1-202ENST00000357811 TMEM256-PLSCR3K7ERE1 68 aa13.77□□□□□ -0.21
COL13A1-202ENST00000357811 OXTP01178 125 aa13.77□□□□□ -0.21
COL13A1-202ENST00000357811 LAMTOR3Q9UHA4 124 aa13.77□□□□□ -0.21
COL13A1-202ENST00000357811 LYPD5Q6UWN5 251 aa13.76□□□□□ -0.21
COL13A1-202ENST00000357811 SERP2Q8N6R1 65 aa13.76□□□□□ -0.21
COL13A1-202ENST00000357811 C6orf48Q9UBA6 75 aa13.75□□□□□ -0.21
COL13A1-202ENST00000357811 TRBV10-3A0A0K0K1G6 114 aa13.74□□□□□ -0.21
COL13A1-202ENST00000357811 M0R2N4 97 aa13.74□□□□□ -0.21
COL13A1-202ENST00000357811 TMEM258P61165 79 aa13.74□□□□□ -0.21
COL13A1-202ENST00000357811 LINC00575Q6W349 94 aa13.74□□□□□ -0.21
COL13A1-202ENST00000357811 USP17L23D6RBM5 183 aa13.74□□□□□ -0.21
COL13A1-202ENST00000357811 Q6ZQY7 126 aa13.73□□□□□ -0.21
COL13A1-202ENST00000357811 Q6JHZ5 121 aa13.73□□□□□ -0.21
COL13A1-202ENST00000357811 LINC00167Q96N53 147 aa13.72□□□□□ -0.21
COL13A1-202ENST00000357811 JMJD7-PLA2G4BH0Y9G9 81 aa13.72□□□□□ -0.21
COL13A1-202ENST00000357811 FAM19A1Q7Z5A9 133 aa13.72□□□□□ -0.21
COL13A1-202ENST00000357811 PRR34Q9NV39 138 aa13.71□□□□□ -0.21
COL13A1-202ENST00000357811 Q6ZTC4 211 aa13.71□□□□□ -0.22
COL13A1-202ENST00000357811 KPRPQ5T749 579 aaPredicted RBP13.7□□□□□ -0.22
COL13A1-202ENST00000357811 TRAV23DV6A0A075B6W5 121 aa13.69□□□□□ -0.22
COL13A1-202ENST00000357811 A0A0J9YWU9 116 aa13.68□□□□□ -0.22
COL13A1-202ENST00000357811 ZNF561-AS1K7EIQ3 104 aa13.68□□□□□ -0.22
COL13A1-202ENST00000357811 UPK3BQ9BT76 320 aa13.68□□□□□ -0.22
COL13A1-202ENST00000357811 CAMK2N2Q96S95 79 aa13.68□□□□□ -0.22
COL13A1-202ENST00000357811 BAHCC1Q9P281 2608 aa13.68□□□□□ -0.22
COL13A1-202ENST00000357811 RBM3P98179 157 aaKnown RBP13.67□□□□□ -0.22
COL13A1-202ENST00000357811 IGLV6-57P01721 117 aa13.66□□□□□ -0.22
COL13A1-202ENST00000357811 WIPF1O43516 503 aa13.65□□□□□ -0.22
COL13A1-202ENST00000357811 COL6A5A8TX70 2615 aa13.65□□□□□ -0.23
COL13A1-202ENST00000357811 KRTAP10-11P60412 298 aa13.64□□□□□ -0.23
COL13A1-202ENST00000357811 Q6ZRU5 148 aa13.63□□□□□ -0.23
COL13A1-202ENST00000357811 NBEAL1Q6ZS30 2694 aa13.63□□□□□ -0.23
COL13A1-202ENST00000357811 Q5XG85 94 aa13.62□□□□□ -0.23
COL13A1-202ENST00000357811 UBL5Q9BZL1 73 aa13.62□□□□□ -0.23
COL13A1-202ENST00000357811 HAMPP81172 84 aa13.62□□□□□ -0.23
COL13A1-202ENST00000357811 GHRHP01286 108 aa13.61□□□□□ -0.23
COL13A1-202ENST00000357811 DIRC1Q969H9 104 aa13.61□□□□□ -0.23
COL13A1-202ENST00000357811 ZNF73O43830 326 aaPredicted RBP13.6□□□□□ -0.23
COL13A1-202ENST00000357811 ESRGQ1W209 222 aa13.6□□□□□ -0.23
COL13A1-202ENST00000357811 Q6ZQT0 140 aa13.6□□□□□ -0.23
COL13A1-202ENST00000357811 IGKV2D-24A0A075B6R9 120 aa13.59□□□□□ -0.23
COL13A1-202ENST00000357811 C20orf197Q8N268 126 aa13.59□□□□□ -0.23
COL13A1-202ENST00000357811 SCXQ7RTU7 201 aa13.58□□□□□ -0.24
COL13A1-202ENST00000357811 C15orf56Q8N910 161 aa13.56□□□□□ -0.24
COL13A1-202ENST00000357811 COX7BP24311 80 aa13.55□□□□□ -0.24
COL13A1-202ENST00000357811 PRB2P02812 416 aaPredicted RBP13.54□□□□□ -0.24
COL13A1-202ENST00000357811 VPREB1P12018 145 aa13.54□□□□□ -0.24
COL13A1-202ENST00000357811 GVQW2A0A096LPI5 108 aaPredicted RBP13.53□□□□□ -0.24
COL13A1-202ENST00000357811 KRTAP26-1Q6PEX3 210 aa13.53□□□□□ -0.24
COL13A1-202ENST00000357811 C1orf43Q9BWL3 253 aa13.53□□□□□ -0.24
COL13A1-202ENST00000357811 Q6ZRP5 223 aa13.53□□□□□ -0.24
COL13A1-202ENST00000357811 Q6ZVQ6 151 aa13.51□□□□□ -0.25
COL13A1-202ENST00000357811 DEFB131BA0A096LNP1 70 aa13.5□□□□□ -0.25
COL13A1-202ENST00000357811 LINC01547P58512 204 aaPredicted RBP13.5□□□□□ -0.25
COL13A1-202ENST00000357811 DEFB105AQ8NG35 78 aa13.49□□□□□ -0.25
COL13A1-202ENST00000357811 MUC7Q8TAX7 377 aa13.49□□□□□ -0.25
COL13A1-202ENST00000357811 NDUFC2-KCTD14E9PQ53 114 aa13.48□□□□□ -0.25
COL13A1-202ENST00000357811 MGAM2Q2M2H8 2515 aa13.48□□□□□ -0.25
COL13A1-202ENST00000357811 FAM236DA0A1B0GTK5 79 aa13.47□□□□□ -0.25
COL13A1-202ENST00000357811 FAM236CP0DP71 79 aa13.47□□□□□ -0.25
COL13A1-202ENST00000357811 ELOF1P60002 83 aaKnown RBP13.47□□□□□ -0.25
COL13A1-202ENST00000357811 EGFEM1PQ0D2K5 195 aa13.47□□□□□ -0.25
COL13A1-202ENST00000357811 LOC110117498A0A087WWA1 95 aa13.47□□□□□ -0.25
COL13A1-202ENST00000357811 M0R378 163 aa13.45□□□□□ -0.26
COL13A1-202ENST00000357811 ATP5EP2Q5VTU8 51 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms