RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 MAP1LC3AQ9H492 121 aa4.92□□□□□ -1.62
COL4A3BP-202ENST00000357457 IGKV2D-26A0A0A0MRZ7 120 aa4.91□□□□□ -1.62
COL4A3BP-202ENST00000357457 PEA15Q15121 130 aa4.91□□□□□ -1.62
COL4A3BP-202ENST00000357457 PAPPA-AS1Q5QFB9 102 aa4.91□□□□□ -1.62
COL4A3BP-202ENST00000357457 AKAP14Q86UN6 197 aa4.91□□□□□ -1.62
COL4A3BP-202ENST00000357457 PPDPFQ9H3Y8 114 aa4.91□□□□□ -1.62
COL4A3BP-202ENST00000357457 GEMIN7Q9H840 131 aaKnown RBP4.91□□□□□ -1.62
COL4A3BP-202ENST00000357457 SMIM1B2RUZ4 78 aa4.9□□□□□ -1.63
COL4A3BP-202ENST00000357457 UBE2AP49459 152 aa4.9□□□□□ -1.63
COL4A3BP-202ENST00000357457 PDZD11Q5EBL8 140 aa4.9□□□□□ -1.63
COL4A3BP-202ENST00000357457 TIMM17AQ99595 171 aa4.9□□□□□ -1.63
COL4A3BP-202ENST00000357457 IGLV5-45A0A087WSX0 123 aa4.89□□□□□ -1.63
COL4A3BP-202ENST00000357457 G0S2P27469 103 aa4.89□□□□□ -1.63
COL4A3BP-202ENST00000357457 SEC61BP60468 96 aaKnown RBP4.89□□□□□ -1.63
COL4A3BP-202ENST00000357457 COX7B2Q8TF08 81 aa4.89□□□□□ -1.63
COL4A3BP-202ENST00000357457 TOMM6Q96B49 74 aa4.89□□□□□ -1.63
COL4A3BP-202ENST00000357457 PLEKHB2Q96CS7 222 aa4.89□□□□□ -1.63
COL4A3BP-202ENST00000357457 PAM16Q9Y3D7 125 aa4.89□□□□□ -1.63
COL4A3BP-202ENST00000357457 TINCRA0A1B0GVN0 87 aa4.88□□□□□ -1.63
COL4A3BP-202ENST00000357457 ASB16-AS1Q495Z4 193 aa4.88□□□□□ -1.63
COL4A3BP-202ENST00000357457 SPAG11AQ6PDA7 123 aa4.88□□□□□ -1.63
COL4A3BP-202ENST00000357457 FP248Q71RG6 208 aaPredicted RBP4.88□□□□□ -1.63
COL4A3BP-202ENST00000357457 NKAPP1Q8N9T2 125 aa4.88□□□□□ -1.63
COL4A3BP-202ENST00000357457 NXT2Q9NPJ8 142 aaKnown RBP4.88□□□□□ -1.63
COL4A3BP-202ENST00000357457 IGKV2-28A0A075B6P5 120 aa4.87□□□□□ -1.63
COL4A3BP-202ENST00000357457 SCO1O75880 301 aa4.87□□□□□ -1.63
COL4A3BP-202ENST00000357457 IGKV2D-28P01615 120 aa4.87□□□□□ -1.63
COL4A3BP-202ENST00000357457 RAB5BP61020 215 aa4.87□□□□□ -1.63
COL4A3BP-202ENST00000357457 PRLHP81277 87 aa4.87□□□□□ -1.63
COL4A3BP-202ENST00000357457 C3orf22Q8N5N4 141 aa4.87□□□□□ -1.63
COL4A3BP-202ENST00000357457 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
COL4A3BP-202ENST00000357457 LINC01547P58512 204 aaPredicted RBP4.86□□□□□ -1.63
COL4A3BP-202ENST00000357457 KRTAP13-3Q3SY46 172 aa4.86□□□□□ -1.63
COL4A3BP-202ENST00000357457 GNB1LQ9BYB4 327 aa4.86□□□□□ -1.63
COL4A3BP-202ENST00000357457 KRTAP4-1Q9BYQ7 146 aa4.86□□□□□ -1.63
COL4A3BP-202ENST00000357457 TMEM126AQ9H061 195 aa4.86□□□□□ -1.63
COL4A3BP-202ENST00000357457 TMEM238C9JI98 176 aa4.85□□□□□ -1.63
COL4A3BP-202ENST00000357457 M0R378 163 aa4.85□□□□□ -1.63
COL4A3BP-202ENST00000357457 ADCYAP1P18509 176 aa4.85□□□□□ -1.63
COL4A3BP-202ENST00000357457 FAM19A1Q7Z5A9 133 aa4.85□□□□□ -1.63
COL4A3BP-202ENST00000357457 SCGB3A1Q96QR1 104 aa4.85□□□□□ -1.63
COL4A3BP-202ENST00000357457 CST9LQ9H4G1 147 aa4.85□□□□□ -1.63
COL4A3BP-202ENST00000357457 LINC01546A6NGU7 62 aa4.84□□□□□ -1.63
COL4A3BP-202ENST00000357457 SPINK8P0C7L1 97 aa4.84□□□□□ -1.63
COL4A3BP-202ENST00000357457 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
COL4A3BP-202ENST00000357457 CBLN2Q8IUK8 224 aa4.84□□□□□ -1.63
COL4A3BP-202ENST00000357457 LINC00337Q8N6G1 96 aa4.84□□□□□ -1.63
COL4A3BP-202ENST00000357457 IGLV5-39A0A0G2JS06 123 aa4.83□□□□□ -1.64
COL4A3BP-202ENST00000357457 LINC01549A6NIU2 74 aa4.83□□□□□ -1.64
COL4A3BP-202ENST00000357457 ATP5LO75964 103 aa4.83□□□□□ -1.64
COL4A3BP-202ENST00000357457 RPL24P83731 157 aaKnown RBP4.83□□□□□ -1.64
COL4A3BP-202ENST00000357457 COX17Q14061 63 aa4.83□□□□□ -1.64
COL4A3BP-202ENST00000357457 SPRR4Q96PI1 79 aa4.83□□□□□ -1.64
COL4A3BP-202ENST00000357457 SND1-IT1Q9HBX3 110 aa4.83□□□□□ -1.64
COL4A3BP-202ENST00000357457 MT-ND4LP03901 98 aa4.82□□□□□ -1.64
COL4A3BP-202ENST00000357457 PFN2P35080 140 aa4.82□□□□□ -1.64
COL4A3BP-202ENST00000357457 Q8NDZ9 215 aa4.82□□□□□ -1.64
COL4A3BP-202ENST00000357457 H3BRM9 83 aa4.81□□□□□ -1.64
COL4A3BP-202ENST00000357457 SPINK1P00995 79 aa4.81□□□□□ -1.64
COL4A3BP-202ENST00000357457 PMVKQ15126 192 aa4.81□□□□□ -1.64
COL4A3BP-202ENST00000357457 HIGD2AQ9BW72 106 aa4.81□□□□□ -1.64
COL4A3BP-202ENST00000357457 ERG28Q9UKR5 140 aa4.81□□□□□ -1.64
COL4A3BP-202ENST00000357457 KIAA1644Q3SXP7 199 aa4.8□□□□□ -1.64
COL4A3BP-202ENST00000357457 Q8NBF4 154 aa4.8□□□□□ -1.64
COL4A3BP-202ENST00000357457 IGLC3P0DOY3 106 aa4.79□□□□□ -1.64
COL4A3BP-202ENST00000357457 RAB14P61106 215 aa4.79□□□□□ -1.64
COL4A3BP-202ENST00000357457 DAND5Q8N907 189 aa4.79□□□□□ -1.64
COL4A3BP-202ENST00000357457 ZNF706Q9Y5V0 76 aaPredicted RBP4.79□□□□□ -1.64
COL4A3BP-202ENST00000357457 ZNF22P17026 224 aaPredicted RBP4.77□□□□□ -1.65
COL4A3BP-202ENST00000357457 SPRR1AP35321 89 aa4.77□□□□□ -1.65
COL4A3BP-202ENST00000357457 RPS29P62273 56 aaKnown RBP4.77□□□□□ -1.65
COL4A3BP-202ENST00000357457 KRTAP19-2Q3LHN2 52 aa4.77□□□□□ -1.65
COL4A3BP-202ENST00000357457 LINC00483Q53H64 154 aa4.77□□□□□ -1.65
COL4A3BP-202ENST00000357457 SFTA2Q6UW10 78 aa4.77□□□□□ -1.65
COL4A3BP-202ENST00000357457 TRAV9-1A0A075B6T8 112 aa4.76□□□□□ -1.65
COL4A3BP-202ENST00000357457 KRTAP4-16G5E9R7 235 aaPredicted RBP4.76□□□□□ -1.65
COL4A3BP-202ENST00000357457 Q8N377 158 aa4.76□□□□□ -1.65
COL4A3BP-202ENST00000357457 SMCR5Q8TEV8 140 aa4.76□□□□□ -1.65
COL4A3BP-202ENST00000357457 ZNF625Q96I27 306 aaPredicted RBP4.76□□□□□ -1.65
COL4A3BP-202ENST00000357457 FLGP20930 4061 aaPredicted RBP4.75□□□□□ -1.65
COL4A3BP-202ENST00000357457 A0A1B0GVG6 124 aa4.75□□□□□ -1.65
COL4A3BP-202ENST00000357457 SSBP3-AS1Q7Z2R9 100 aa4.75□□□□□ -1.65
COL4A3BP-202ENST00000357457 KCNQ1DNQ9H478 68 aa4.75□□□□□ -1.65
COL4A3BP-202ENST00000357457 NDUFA12Q9UI09 145 aa4.75□□□□□ -1.65
COL4A3BP-202ENST00000357457 CBY1Q9Y3M2 126 aa4.75□□□□□ -1.65
COL4A3BP-202ENST00000357457 A0A096LNJ9 63 aa4.74□□□□□ -1.65
COL4A3BP-202ENST00000357457 FA2HQ7L5A8 372 aa4.74□□□□□ -1.65
COL4A3BP-202ENST00000357457 FAM19A2Q8N3H0 131 aa4.74□□□□□ -1.65
COL4A3BP-202ENST00000357457 SLC25A20O43772 301 aa4.73□□□□□ -1.65
COL4A3BP-202ENST00000357457 LINC00158P58513 81 aa4.73□□□□□ -1.65
COL4A3BP-202ENST00000357457 SLC7A5P1Q8MH63 180 aa4.73□□□□□ -1.65
COL4A3BP-202ENST00000357457 LINC00518Q8N0U6 118 aa4.73□□□□□ -1.65
COL4A3BP-202ENST00000357457 C11orf86A6NJI1 115 aa4.72□□□□□ -1.65
COL4A3BP-202ENST00000357457 NDUFA6P56556 154 aa4.72□□□□□ -1.65
COL4A3BP-202ENST00000357457 MT1HP80294 61 aa4.72□□□□□ -1.65
COL4A3BP-202ENST00000357457 VAMP3Q15836 100 aa4.72□□□□□ -1.65
COL4A3BP-202ENST00000357457 UQCC3Q6UW78 93 aa4.72□□□□□ -1.65
COL4A3BP-202ENST00000357457 URB1-AS1Q96HZ7 61 aa4.72□□□□□ -1.65
COL4A3BP-202ENST00000357457 SMCO4Q9NRQ5 59 aa4.72□□□□□ -1.65
COL4A3BP-202ENST00000357457 CFC1BP0CG36 223 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms