RNA–Protein interactions for RNA: ENST00000357246.3

MAP1LC3C-201, Transcript of microtubule associated protein 1 light chain 3 gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3C, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3C-201ENST00000357246 FAM168BA1KXE4 195 aa5.23□□□□□ -1.57
MAP1LC3C-201ENST00000357246 H3BRM9 83 aa5.23□□□□□ -1.57
MAP1LC3C-201ENST00000357246 PMCHL1Q16048 86 aa5.23□□□□□ -1.57
MAP1LC3C-201ENST00000357246 C9orf129Q5T035 196 aaKnown RBP5.23□□□□□ -1.57
MAP1LC3C-201ENST00000357246 PHF5AQ7RTV0 110 aaKnown RBP5.23□□□□□ -1.57
MAP1LC3C-201ENST00000357246 KRTAP7-1Q8IUC3 87 aa5.23□□□□□ -1.57
MAP1LC3C-201ENST00000357246 COX7B2Q8TF08 81 aa5.23□□□□□ -1.57
MAP1LC3C-201ENST00000357246 PSORS1C2Q9UIG4 136 aa5.23□□□□□ -1.57
MAP1LC3C-201ENST00000357246 LRP1Q07954 4544 aaKnown RBP5.22□□□□□ -1.57
MAP1LC3C-201ENST00000357246 MT1HL1P0DM35 61 aa5.22□□□□□ -1.57
MAP1LC3C-201ENST00000357246 NDUFA6P56556 154 aa5.22□□□□□ -1.57
MAP1LC3C-201ENST00000357246 C4orf26Q17RF5 130 aa5.22□□□□□ -1.57
MAP1LC3C-201ENST00000357246 BAGE3Q86Y29 109 aa5.22□□□□□ -1.57
MAP1LC3C-201ENST00000357246 LINC01600Q96MT4 127 aa5.22□□□□□ -1.57
MAP1LC3C-201ENST00000357246 SIGMAR1Q99720 223 aa5.22□□□□□ -1.57
MAP1LC3C-201ENST00000357246 PPDPFQ9H3Y8 114 aa5.22□□□□□ -1.57
MAP1LC3C-201ENST00000357246 IGLV5-39A0A0G2JS06 123 aa5.21□□□□□ -1.58
MAP1LC3C-201ENST00000357246 TRGC2P03986 189 aa5.21□□□□□ -1.58
MAP1LC3C-201ENST00000357246 SPINK8P0C7L1 97 aa5.21□□□□□ -1.58
MAP1LC3C-201ENST00000357246 TRAV12-1A0A0B4J245 112 aa5.2□□□□□ -1.58
MAP1LC3C-201ENST00000357246 A0A1B0GV90 55 aa5.2□□□□□ -1.58
MAP1LC3C-201ENST00000357246 ZNF22P17026 224 aaPredicted RBP5.2□□□□□ -1.58
MAP1LC3C-201ENST00000357246 REG3GQ6UW15 175 aa5.2□□□□□ -1.58
MAP1LC3C-201ENST00000357246 KRTAP11-1Q8IUC1 163 aa5.2□□□□□ -1.58
MAP1LC3C-201ENST00000357246 IFI27L1Q96BM0 104 aa5.2□□□□□ -1.58
MAP1LC3C-201ENST00000357246 PRO0628Q9UI54 55 aa5.2□□□□□ -1.58
MAP1LC3C-201ENST00000357246 C11orf86A6NJI1 115 aa5.19□□□□□ -1.58
MAP1LC3C-201ENST00000357246 IGLV7-43P04211 117 aa5.19□□□□□ -1.58
MAP1LC3C-201ENST00000357246 C1orf137Q5JT78 98 aa5.19□□□□□ -1.58
MAP1LC3C-201ENST00000357246 SMIM20Q8N5G0 67 aa5.19□□□□□ -1.58
MAP1LC3C-201ENST00000357246 C12orf57Q99622 126 aa5.19□□□□□ -1.58
MAP1LC3C-201ENST00000357246 XAGE1AQ9HD64 81 aa5.19□□□□□ -1.58
MAP1LC3C-201ENST00000357246 C22orf24Q9Y442 160 aa5.19□□□□□ -1.58
MAP1LC3C-201ENST00000357246 FAT3Q8TDW7 4589 aa5.18□□□□□ -1.58
MAP1LC3C-201ENST00000357246 A6NDN8 102 aa5.18□□□□□ -1.58
MAP1LC3C-201ENST00000357246 KRTAP10-8P60410 259 aa5.18□□□□□ -1.58
MAP1LC3C-201ENST00000357246 TP73-AS1Q9UF72 201 aa5.18□□□□□ -1.58
MAP1LC3C-201ENST00000357246 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
MAP1LC3C-201ENST00000357246 UBE2BP63146 152 aa5.17□□□□□ -1.58
MAP1LC3C-201ENST00000357246 COX17Q14061 63 aa5.17□□□□□ -1.58
MAP1LC3C-201ENST00000357246 TMEM170BQ5T4T1 132 aa5.17□□□□□ -1.58
MAP1LC3C-201ENST00000357246 SFTA2Q6UW10 78 aa5.17□□□□□ -1.58
MAP1LC3C-201ENST00000357246 FAM19A2Q8N3H0 131 aa5.17□□□□□ -1.58
MAP1LC3C-201ENST00000357246 FAM240AA0A1B0GVK7 77 aa5.16□□□□□ -1.58
MAP1LC3C-201ENST00000357246 TMEM223A0PJW6 202 aa5.16□□□□□ -1.58
MAP1LC3C-201ENST00000357246 LINC00310P59036 64 aa5.16□□□□□ -1.58
MAP1LC3C-201ENST00000357246 C1orf195Q5TG92 126 aa5.16□□□□□ -1.58
MAP1LC3C-201ENST00000357246 OR13C6PQ8NH95 151 aa5.16□□□□□ -1.58
MAP1LC3C-201ENST00000357246 DIRC1Q969H9 104 aa5.16□□□□□ -1.58
MAP1LC3C-201ENST00000357246 IGLV5-37A0A075B6J1 123 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 NUPR1O60356 82 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 HIST1H2BKO60814 126 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 SERF1AO75920 110 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 HIST1H2BJP06899 126 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 HIST1H2BOP23527 126 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 HIST1H2BBP33778 126 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 HIST1H2BDP58876 126 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 HIST1H2BCP62807 126 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 HIST2H2BEQ16778 126 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 MRPL55Q7Z7F7 128 aaKnown RBP5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 HIST1H2BHQ93079 126 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 ZNF625Q96I27 306 aaPredicted RBP5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 HIST1H2BNQ99877 126 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 HIST1H2BMQ99879 126 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 PKHD1L1Q86WI1 4243 aa5.15□□□□□ -1.59
MAP1LC3C-201ENST00000357246 LEPROTL1O95214 131 aa5.14□□□□□ -1.59
MAP1LC3C-201ENST00000357246 PFN2P35080 140 aa5.14□□□□□ -1.59
MAP1LC3C-201ENST00000357246 LINC00167Q96N53 147 aa5.14□□□□□ -1.59
MAP1LC3C-201ENST00000357246 ERG28Q9UKR5 140 aa5.14□□□□□ -1.59
MAP1LC3C-201ENST00000357246 H0Y9J4 135 aa5.13□□□□□ -1.59
MAP1LC3C-201ENST00000357246 DLEU1O43261 78 aa5.13□□□□□ -1.59
MAP1LC3C-201ENST00000357246 ZNF861PO60384 105 aa5.13□□□□□ -1.59
MAP1LC3C-201ENST00000357246 COA6Q5JTJ3 125 aaKnown RBP5.13□□□□□ -1.59
MAP1LC3C-201ENST00000357246 SND1-IT1Q9HBX3 110 aa5.13□□□□□ -1.59
MAP1LC3C-201ENST00000357246 HSPB8Q9UJY1 196 aa5.13□□□□□ -1.59
MAP1LC3C-201ENST00000357246 IGLV9-49A0A0B4J1Y8 123 aa5.12□□□□□ -1.59
MAP1LC3C-201ENST00000357246 RPL24P83731 157 aaKnown RBP5.12□□□□□ -1.59
MAP1LC3C-201ENST00000357246 RPL37AP8A6NKH3 93 aa5.11□□□□□ -1.59
MAP1LC3C-201ENST00000357246 BCE1O60756 84 aa5.11□□□□□ -1.59
MAP1LC3C-201ENST00000357246 SMIM6P0DI80 62 aa5.11□□□□□ -1.59
MAP1LC3C-201ENST00000357246 FABP4P15090 132 aa5.11□□□□□ -1.59
MAP1LC3C-201ENST00000357246 NKAPP1Q8N9T2 125 aa5.11□□□□□ -1.59
MAP1LC3C-201ENST00000357246 HMCN2Q8NDA2 5059 aa5.11□□□□□ -1.59
MAP1LC3C-201ENST00000357246 A0A1B0GWB2 263 aa5.1□□□□□ -1.59
MAP1LC3C-201ENST00000357246 KRTAP1-4P0C5Y4 121 aa5.1□□□□□ -1.59
MAP1LC3C-201ENST00000357246 PLNP26678 52 aa5.1□□□□□ -1.59
MAP1LC3C-201ENST00000357246 LINC00158P58513 81 aa5.1□□□□□ -1.59
MAP1LC3C-201ENST00000357246 VPS25Q9BRG1 176 aa5.1□□□□□ -1.59
MAP1LC3C-201ENST00000357246 IGLV1-50A0A075B6I6 118 aa5.09□□□□□ -1.59
MAP1LC3C-201ENST00000357246 MYMXA0A1B0GTQ4 84 aa5.09□□□□□ -1.59
MAP1LC3C-201ENST00000357246 LEPROTO15243 131 aa5.09□□□□□ -1.59
MAP1LC3C-201ENST00000357246 DPM2O94777 84 aa5.09□□□□□ -1.59
MAP1LC3C-201ENST00000357246 S100A2P29034 98 aa5.09□□□□□ -1.59
MAP1LC3C-201ENST00000357246 RPL28P46779 137 aaKnown RBP5.09□□□□□ -1.59
MAP1LC3C-201ENST00000357246 Q6ZVH6 145 aa5.09□□□□□ -1.59
MAP1LC3C-201ENST00000357246 PLEKHB2Q96CS7 222 aa5.09□□□□□ -1.59
MAP1LC3C-201ENST00000357246 NDUFA12Q9UI09 145 aa5.09□□□□□ -1.59
MAP1LC3C-201ENST00000357246 IGKCP01834 107 aa5.08□□□□□ -1.6
MAP1LC3C-201ENST00000357246 SMIM13P0DJ93 91 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms