RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 ESRGQ1W209 222 aa10.82□□□□□ -0.68
TRAPPC11-202ENST00000357207 PSPHP1O15172 72 aa10.81□□□□□ -0.68
TRAPPC11-202ENST00000357207 A0A0C4DFX4 3053 aa10.81□□□□□ -0.68
TRAPPC11-202ENST00000357207 LINC00474Q9P2X8 69 aa10.8□□□□□ -0.68
TRAPPC11-202ENST00000357207 DEFB116Q30KQ4 102 aa10.78□□□□□ -0.68
TRAPPC11-202ENST00000357207 PRO0628Q9UI54 55 aa10.78□□□□□ -0.68
TRAPPC11-202ENST00000357207 Q9BRP9 147 aa10.77□□□□□ -0.68
TRAPPC11-202ENST00000357207 CHD7Q9P2D1 2997 aa10.77□□□□□ -0.69
TRAPPC11-202ENST00000357207 Q6ZQT0 140 aa10.77□□□□□ -0.69
TRAPPC11-202ENST00000357207 HCG22E2RYF7 251 aa10.76□□□□□ -0.69
TRAPPC11-202ENST00000357207 KIAA0087Q14695 138 aa10.76□□□□□ -0.69
TRAPPC11-202ENST00000357207 EIF4EBP3O60516 100 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC11-202ENST00000357207 M0R2N4 97 aa10.76□□□□□ -0.69
TRAPPC11-202ENST00000357207 H0Y9P7 68 aa10.75□□□□□ -0.69
TRAPPC11-202ENST00000357207 SMCR5Q8TEV8 140 aa10.75□□□□□ -0.69
TRAPPC11-202ENST00000357207 C7orf33Q8WU49 177 aa10.75□□□□□ -0.69
TRAPPC11-202ENST00000357207 C6orf48Q9UBA6 75 aa10.75□□□□□ -0.69
TRAPPC11-202ENST00000357207 USP24Q9UPU5 2620 aa10.75□□□□□ -0.69
TRAPPC11-202ENST00000357207 NHLRC4P0CG21 123 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC11-202ENST00000357207 C4orf26Q17RF5 130 aa10.75□□□□□ -0.69
TRAPPC11-202ENST00000357207 BPTFQ12830 3046 aa10.73□□□□□ -0.69
TRAPPC11-202ENST00000357207 LOC110117498A0A087WWA1 95 aa10.73□□□□□ -0.69
TRAPPC11-202ENST00000357207 PCOTHQ58A44 107 aa10.73□□□□□ -0.69
TRAPPC11-202ENST00000357207 SMIM29Q86T20 159 aa10.73□□□□□ -0.69
TRAPPC11-202ENST00000357207 hDV103S1A0JD37 113 aa10.72□□□□□ -0.69
TRAPPC11-202ENST00000357207 C22orf24Q9Y442 160 aa10.72□□□□□ -0.69
TRAPPC11-202ENST00000357207 C5orf42Q9H799 3197 aa10.71□□□□□ -0.7
TRAPPC11-202ENST00000357207 K7ERS5 55 aa10.7□□□□□ -0.7
TRAPPC11-202ENST00000357207 PRLHP81277 87 aa10.7□□□□□ -0.7
TRAPPC11-202ENST00000357207 IGHV6-1A0A0B4J1U7 121 aa10.7□□□□□ -0.7
TRAPPC11-202ENST00000357207 ELOF1P60002 83 aaKnown RBP10.7□□□□□ -0.7
TRAPPC11-202ENST00000357207 X6R8D5 127 aa10.7□□□□□ -0.7
TRAPPC11-202ENST00000357207 TM2D3Q9BRN9 247 aa10.68□□□□□ -0.7
TRAPPC11-202ENST00000357207 A0A1B0GW54 56 aa10.67□□□□□ -0.7
TRAPPC11-202ENST00000357207 LINC01556Q5JQF7 62 aa10.66□□□□□ -0.7
TRAPPC11-202ENST00000357207 LINC00167Q96N53 147 aa10.66□□□□□ -0.7
TRAPPC11-202ENST00000357207 C1orf64Q8NEQ6 169 aa10.65□□□□□ -0.7
TRAPPC11-202ENST00000357207 Q8NBF4 154 aa10.63□□□□□ -0.71
TRAPPC11-202ENST00000357207 CIRBP-AS1Q8TBR5 109 aa10.61□□□□□ -0.71
TRAPPC11-202ENST00000357207 LIMD2Q9BT23 127 aa10.61□□□□□ -0.71
TRAPPC11-202ENST00000357207 FSHBP01225 129 aa10.6□□□□□ -0.71
TRAPPC11-202ENST00000357207 IGLV6-57P01721 117 aa10.59□□□□□ -0.71
TRAPPC11-202ENST00000357207 CFAP54Q96N23 3096 aa10.59□□□□□ -0.71
TRAPPC11-202ENST00000357207 Q6ZRX8 168 aa10.58□□□□□ -0.72
TRAPPC11-202ENST00000357207 GVQW2A0A096LPI5 108 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC11-202ENST00000357207 FLNBO75369 2602 aaKnown RBP10.57□□□□□ -0.72
TRAPPC11-202ENST00000357207 H3BNG1 76 aa10.57□□□□□ -0.72
TRAPPC11-202ENST00000357207 VPREB1P12018 145 aa10.55□□□□□ -0.72
TRAPPC11-202ENST00000357207 CENPEQ02224 2701 aa10.55□□□□□ -0.72
TRAPPC11-202ENST00000357207 ZNF575Q86XF7 245 aa10.54□□□□□ -0.72
TRAPPC11-202ENST00000357207 LINC00476Q8WZB0 136 aa10.54□□□□□ -0.72
TRAPPC11-202ENST00000357207 NUPR2A6NF83 97 aa10.54□□□□□ -0.72
TRAPPC11-202ENST00000357207 CHD9Q3L8U1 2897 aa10.54□□□□□ -0.72
TRAPPC11-202ENST00000357207 Q8NAQ8 132 aa10.53□□□□□ -0.72
TRAPPC11-202ENST00000357207 LY6G6CO95867 125 aa10.53□□□□□ -0.72
TRAPPC11-202ENST00000357207 MGAM2Q2M2H8 2515 aa10.53□□□□□ -0.72
TRAPPC11-202ENST00000357207 ST20-AS1Q8NBB2 130 aa10.52□□□□□ -0.73
TRAPPC11-202ENST00000357207 CSNK1G2-AS1Q8NCQ2 148 aa10.51□□□□□ -0.73
TRAPPC11-202ENST00000357207 RANBP2P49792 3224 aaKnown RBP10.51□□□□□ -0.73
TRAPPC11-202ENST00000357207 ERC2-IT1O76042 136 aa10.5□□□□□ -0.73
TRAPPC11-202ENST00000357207 TP53AIP1Q9HCN2 124 aa10.5□□□□□ -0.73
TRAPPC11-202ENST00000357207 KLKP1Q107X0 134 aa10.5□□□□□ -0.73
TRAPPC11-202ENST00000357207 H3BPC8 53 aa10.5□□□□□ -0.73
TRAPPC11-202ENST00000357207 Q6ZRP5 223 aa10.5□□□□□ -0.73
TRAPPC11-202ENST00000357207 LAMA2P24043 3122 aaKnown RBP10.5□□□□□ -0.73
TRAPPC11-202ENST00000357207 RETNLBQ9BQ08 111 aa10.49□□□□□ -0.73
TRAPPC11-202ENST00000357207 HTTP42858 3142 aa10.48□□□□□ -0.73
TRAPPC11-202ENST00000357207 IGLV5-52A0A0A0MRZ9 124 aa10.47□□□□□ -0.73
TRAPPC11-202ENST00000357207 LINC00528Q8N1L1 170 aa10.47□□□□□ -0.73
TRAPPC11-202ENST00000357207 TRBV7-4A0A0J9YYF1 115 aa10.47□□□□□ -0.73
TRAPPC11-202ENST00000357207 C9orf129Q5T035 196 aaKnown RBP10.46□□□□□ -0.73
TRAPPC11-202ENST00000357207 TRAV22A0A0B4J277 110 aa10.46□□□□□ -0.74
TRAPPC11-202ENST00000357207 HECTD1Q9ULT8 2610 aa10.45□□□□□ -0.74
TRAPPC11-202ENST00000357207 GIG44P09565 113 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC11-202ENST00000357207 LINC01600Q96MT4 127 aa10.44□□□□□ -0.74
TRAPPC11-202ENST00000357207 SPINK1P00995 79 aa10.44□□□□□ -0.74
TRAPPC11-202ENST00000357207 AKAP13Q12802 2813 aa10.43□□□□□ -0.74
TRAPPC11-202ENST00000357207 H7BZZ5 65 aa10.42□□□□□ -0.74
TRAPPC11-202ENST00000357207 SPAG11AQ6PDA7 123 aa10.42□□□□□ -0.74
TRAPPC11-202ENST00000357207 ATRQ13535 2644 aa10.42□□□□□ -0.74
TRAPPC11-202ENST00000357207 KCNQ1DNQ9H478 68 aa10.42□□□□□ -0.74
TRAPPC11-202ENST00000357207 K7EQZ3 153 aa10.41□□□□□ -0.74
TRAPPC11-202ENST00000357207 RPL37AP61513 92 aaKnown RBP10.41□□□□□ -0.74
TRAPPC11-202ENST00000357207 PRR34Q9NV39 138 aa10.41□□□□□ -0.74
TRAPPC11-202ENST00000357207 FLNAP21333 2647 aaKnown RBP10.41□□□□□ -0.74
TRAPPC11-202ENST00000357207 MOBPQ13875 183 aa10.4□□□□□ -0.74
TRAPPC11-202ENST00000357207 PHF5AQ7RTV0 110 aaKnown RBP10.4□□□□□ -0.75
TRAPPC11-202ENST00000357207 C19orf73Q9NVV2 129 aa10.4□□□□□ -0.75
TRAPPC11-202ENST00000357207 EPM2AB3EWF7 344 aa10.39□□□□□ -0.75
TRAPPC11-202ENST00000357207 SERTAD4-AS1Q5TG53 156 aa10.39□□□□□ -0.75
TRAPPC11-202ENST00000357207 C16orf90A8MZG2 172 aa10.38□□□□□ -0.75
TRAPPC11-202ENST00000357207 LINC00588Q9Y4M8 146 aa10.38□□□□□ -0.75
TRAPPC11-202ENST00000357207 ACYP2P14621 99 aa10.37□□□□□ -0.75
TRAPPC11-202ENST00000357207 LINC00336Q6ZUF6 198 aa10.37□□□□□ -0.75
TRAPPC11-202ENST00000357207 IGKV2D-30A0A075B6S6 120 aa10.36□□□□□ -0.75
TRAPPC11-202ENST00000357207 IGKV2-30P06310 120 aa10.36□□□□□ -0.75
TRAPPC11-202ENST00000357207 MAST4O15021 2626 aa10.36□□□□□ -0.75
TRAPPC11-202ENST00000357207 A0A096LNT2 108 aa10.36□□□□□ -0.75
TRAPPC11-202ENST00000357207 DNAH10OSP0CZ25 163 aa10.36□□□□□ -0.75
TRAPPC11-202ENST00000357207 A0A1B0GU69 56 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms