RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 AGRNO00468 2067 aa11.16□□□□□ -0.62
RXRA-201ENST00000356384 IGLV5-39A0A0G2JS06 123 aa11.16□□□□□ -0.62
RXRA-201ENST00000356384 C6orf48Q9UBA6 75 aa11.16□□□□□ -0.62
RXRA-201ENST00000356384 WDR87Q6ZQQ6 2873 aa11.16□□□□□ -0.62
RXRA-201ENST00000356384 KIF25-AS1Q9Y6Z4 181 aa11.15□□□□□ -0.62
RXRA-201ENST00000356384 ZNF462Q96JM2 2506 aa11.15□□□□□ -0.63
RXRA-201ENST00000356384 MDFIQ99750 246 aa11.14□□□□□ -0.63
RXRA-201ENST00000356384 FN1P02751 2386 aaKnown RBP11.14□□□□□ -0.63
RXRA-201ENST00000356384 C11orf72Q8NBR9 251 aa11.14□□□□□ -0.63
RXRA-201ENST00000356384 IGHV3OR16-9A0A0B4J2B5 98 aa11.13□□□□□ -0.63
RXRA-201ENST00000356384 CHD8Q9HCK8 2581 aa11.13□□□□□ -0.63
RXRA-201ENST00000356384 SETD2Q9BYW2 2564 aaPredicted RBP11.13□□□□□ -0.63
RXRA-201ENST00000356384 RAI1Q7Z5J4 1906 aaPredicted RBP11.13□□□□□ -0.63
RXRA-201ENST00000356384 IGLV8-61A0A075B6I0 122 aa11.12□□□□□ -0.63
RXRA-201ENST00000356384 LRRK2Q5S007 2527 aa11.12□□□□□ -0.63
RXRA-201ENST00000356384 NHLRC4P0CG21 123 aaPredicted RBP11.11□□□□□ -0.63
RXRA-201ENST00000356384 ATP11AUNQ6ZP68 121 aa11.11□□□□□ -0.63
RXRA-201ENST00000356384 C4orf26Q17RF5 130 aa11.1□□□□□ -0.63
RXRA-201ENST00000356384 PCNTO95613 3336 aa11.1□□□□□ -0.63
RXRA-201ENST00000356384 FAM218AQ96MZ4 157 aa11.09□□□□□ -0.63
RXRA-201ENST00000356384 PHF5AQ7RTV0 110 aaKnown RBP11.07□□□□□ -0.64
RXRA-201ENST00000356384 LINC00476Q8WZB0 136 aa11.06□□□□□ -0.64
RXRA-201ENST00000356384 ELOF1P60002 83 aaKnown RBP11.06□□□□□ -0.64
RXRA-201ENST00000356384 SMCPP49901 116 aaPredicted RBP11.06□□□□□ -0.64
RXRA-201ENST00000356384 USP9XQ93008 2570 aaPredicted RBP11.05□□□□□ -0.64
RXRA-201ENST00000356384 LINC00313P59037 77 aa11.05□□□□□ -0.64
RXRA-201ENST00000356384 SPINT4Q6UDR6 99 aa11.05□□□□□ -0.64
RXRA-201ENST00000356384 LINC01546A6NGU7 62 aa11.04□□□□□ -0.64
RXRA-201ENST00000356384 CHTF8P0CG12 524 aa11.04□□□□□ -0.64
RXRA-201ENST00000356384 RPL37AP61513 92 aaKnown RBP11.03□□□□□ -0.64
RXRA-201ENST00000356384 Q6ZQT0 140 aa11.03□□□□□ -0.64
RXRA-201ENST00000356384 LINC00315P59091 139 aa11.03□□□□□ -0.64
RXRA-201ENST00000356384 BCE1O60756 84 aa11.02□□□□□ -0.64
RXRA-201ENST00000356384 Q8NBF4 154 aa11.02□□□□□ -0.64
RXRA-201ENST00000356384 TRAV22A0A0B4J277 110 aa11.02□□□□□ -0.65
RXRA-201ENST00000356384 ST20-AS1Q8NBB2 130 aa11.01□□□□□ -0.65
RXRA-201ENST00000356384 EPM2AB3EWF7 344 aa11.01□□□□□ -0.65
RXRA-201ENST00000356384 Q6ZRX8 168 aa11.01□□□□□ -0.65
RXRA-201ENST00000356384 C8orf87E5RJ46 101 aa11.01□□□□□ -0.65
RXRA-201ENST00000356384 CPAMD8Q8IZJ3 1885 aa11.01□□□□□ -0.65
RXRA-201ENST00000356384 TYMSOSQ8TAI1 123 aa11□□□□□ -0.65
RXRA-201ENST00000356384 H3BPC8 53 aa11□□□□□ -0.65
RXRA-201ENST00000356384 TM2D3Q9BRN9 247 aa11□□□□□ -0.65
RXRA-201ENST00000356384 TET2Q6N021 2002 aaPredicted RBP10.99□□□□□ -0.65
RXRA-201ENST00000356384 HTTP42858 3142 aa10.99□□□□□ -0.65
RXRA-201ENST00000356384 CEP295Q9C0D2 2601 aa10.99□□□□□ -0.65
RXRA-201ENST00000356384 A0A1B0GW54 56 aa10.99□□□□□ -0.65
RXRA-201ENST00000356384 ADAMTS20P59510 1910 aa10.98□□□□□ -0.65
RXRA-201ENST00000356384 IGLV5-45A0A087WSX0 123 aa10.98□□□□□ -0.65
RXRA-201ENST00000356384 RTL8CO15255 209 aa10.98□□□□□ -0.65
RXRA-201ENST00000356384 Q96NJ1 140 aa10.97□□□□□ -0.65
RXRA-201ENST00000356384 LOC110117498A0A087WWA1 95 aa10.97□□□□□ -0.65
RXRA-201ENST00000356384 FAM19A4Q96LR4 140 aa10.97□□□□□ -0.65
RXRA-201ENST00000356384 FAM229AH3BQW9 127 aa10.96□□□□□ -0.65
RXRA-201ENST00000356384 PRO0461Q9UI25 63 aa10.95□□□□□ -0.66
RXRA-201ENST00000356384 Q6ZRP5 223 aa10.94□□□□□ -0.66
RXRA-201ENST00000356384 RPS28P62857 69 aaKnown RBP10.94□□□□□ -0.66
RXRA-201ENST00000356384 ANKRD11Q6UB99 2663 aaPredicted RBP10.94□□□□□ -0.66
RXRA-201ENST00000356384 SSBP3-AS1Q7Z2R9 100 aa10.94□□□□□ -0.66
RXRA-201ENST00000356384 PKD1L2Q7Z442 2459 aa10.93□□□□□ -0.66
RXRA-201ENST00000356384 C16orf90A8MZG2 172 aa10.92□□□□□ -0.66
RXRA-201ENST00000356384 H3BNG1 76 aa10.91□□□□□ -0.66
RXRA-201ENST00000356384 USP9YO00507 2555 aaPredicted RBP10.91□□□□□ -0.66
RXRA-201ENST00000356384 LINC01600Q96MT4 127 aa10.9□□□□□ -0.66
RXRA-201ENST00000356384 NBDYA0A0U1RRE5 68 aa10.9□□□□□ -0.67
RXRA-201ENST00000356384 TRBV7-4A0A0J9YYF1 115 aa10.89□□□□□ -0.67
RXRA-201ENST00000356384 SPTBN4Q9H254 2564 aa10.88□□□□□ -0.67
RXRA-201ENST00000356384 F8P00451 2351 aa10.88□□□□□ -0.67
RXRA-201ENST00000356384 LOC101927531A0A1B0GV80 90 aa10.88□□□□□ -0.67
RXRA-201ENST00000356384 KRTAP24-1Q3LI83 254 aa10.88□□□□□ -0.67
RXRA-201ENST00000356384 C5orf42Q9H799 3197 aa10.88□□□□□ -0.67
RXRA-201ENST00000356384 FASNP49327 2511 aaKnown RBP10.87□□□□□ -0.67
RXRA-201ENST00000356384 LINC00588Q9Y4M8 146 aa10.87□□□□□ -0.67
RXRA-201ENST00000356384 CHD7Q9P2D1 2997 aa10.85□□□□□ -0.67
RXRA-201ENST00000356384 K7EQZ3 153 aa10.85□□□□□ -0.67
RXRA-201ENST00000356384 MTORP42345 2549 aa10.85□□□□□ -0.67
RXRA-201ENST00000356384 A8MWP4 228 aa10.84□□□□□ -0.67
RXRA-201ENST00000356384 COA5Q86WW8 74 aa10.84□□□□□ -0.67
RXRA-201ENST00000356384 A8MUN3 132 aa10.84□□□□□ -0.67
RXRA-201ENST00000356384 GVQW2A0A096LPI5 108 aaPredicted RBP10.84□□□□□ -0.67
RXRA-201ENST00000356384 FAM168BA1KXE4 195 aa10.84□□□□□ -0.67
RXRA-201ENST00000356384 MRPL34Q9BQ48 92 aaKnown RBP10.83□□□□□ -0.68
RXRA-201ENST00000356384 POLQO75417 2590 aa10.83□□□□□ -0.68
RXRA-201ENST00000356384 APLNQ9ULZ1 77 aa10.82□□□□□ -0.68
RXRA-201ENST00000356384 VPREB1P12018 145 aa10.81□□□□□ -0.68
RXRA-201ENST00000356384 PCSK5Q92824 1860 aa10.81□□□□□ -0.68
RXRA-201ENST00000356384 BRCA2P51587 3418 aa10.8□□□□□ -0.68
RXRA-201ENST00000356384 Q8NAQ8 132 aa10.8□□□□□ -0.68
RXRA-201ENST00000356384 MKI67P46013 3256 aaKnown RBP10.8□□□□□ -0.68
RXRA-201ENST00000356384 UQCR11O14957 56 aa10.78□□□□□ -0.68
RXRA-201ENST00000356384 COX6B2Q6YFQ2 88 aa10.78□□□□□ -0.68
RXRA-201ENST00000356384 IGLV6-57P01721 117 aa10.77□□□□□ -0.69
RXRA-201ENST00000356384 J3QL48 77 aa10.77□□□□□ -0.69
RXRA-201ENST00000356384 CRIPTQ9P021 101 aa10.76□□□□□ -0.69
RXRA-201ENST00000356384 LITAFQ99732 161 aa10.76□□□□□ -0.69
RXRA-201ENST00000356384 DSCR10P59022 87 aa10.75□□□□□ -0.69
RXRA-201ENST00000356384 PTPRBP23467 1997 aa10.74□□□□□ -0.69
RXRA-201ENST00000356384 CYP4F30PQ9H0H9 118 aa10.73□□□□□ -0.69
RXRA-201ENST00000356384 CHD9Q3L8U1 2897 aa10.72□□□□□ -0.69
RXRA-201ENST00000356384 IGLV1-50A0A075B6I6 118 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms