RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 C19orf73Q9NVV2 129 aa8.6□□□□□ -1.03
PCDHB11-201ENST00000354757 NHLRC4P0CG21 123 aaPredicted RBP8.6□□□□□ -1.03
PCDHB11-201ENST00000354757 Q8NAQ8 132 aa8.6□□□□□ -1.03
PCDHB11-201ENST00000354757 ESRGQ1W209 222 aa8.6□□□□□ -1.03
PCDHB11-201ENST00000354757 UBL5Q9BZL1 73 aa8.6□□□□□ -1.03
PCDHB11-201ENST00000354757 LRCOL1A6NCL2 159 aa8.59□□□□□ -1.03
PCDHB11-201ENST00000354757 KRTAP10-11P60412 298 aa8.59□□□□□ -1.03
PCDHB11-201ENST00000354757 CSDC2Q9Y534 153 aaKnown RBP8.58□□□□□ -1.04
PCDHB11-201ENST00000354757 TRAV23DV6A0A075B6W5 121 aa8.58□□□□□ -1.04
PCDHB11-201ENST00000354757 Q8IZM0 81 aa8.58□□□□□ -1.04
PCDHB11-201ENST00000354757 KMT2BQ9UMN6 2715 aaPredicted RBP8.58□□□□□ -1.04
PCDHB11-201ENST00000354757 COX7BP24311 80 aa8.57□□□□□ -1.04
PCDHB11-201ENST00000354757 C5orf47Q569G3 176 aa8.57□□□□□ -1.04
PCDHB11-201ENST00000354757 CSNK1G2-AS1Q8NCQ2 148 aa8.57□□□□□ -1.04
PCDHB11-201ENST00000354757 USP17L23D6RBM5 183 aa8.56□□□□□ -1.04
PCDHB11-201ENST00000354757 A0A087WVE0 104 aa8.56□□□□□ -1.04
PCDHB11-201ENST00000354757 COX7CP15954 63 aa8.56□□□□□ -1.04
PCDHB11-201ENST00000354757 C20orf197Q8N268 126 aa8.56□□□□□ -1.04
PCDHB11-201ENST00000354757 SMIM11BQ8TCY0 68 aa8.56□□□□□ -1.04
PCDHB11-201ENST00000354757 CSMD1Q96PZ7 3565 aa8.55□□□□□ -1.04
PCDHB11-201ENST00000354757 FAM19A1Q7Z5A9 133 aa8.55□□□□□ -1.04
PCDHB11-201ENST00000354757 IMUPQ9GZP8 106 aa8.55□□□□□ -1.04
PCDHB11-201ENST00000354757 A0A1B0GUV1 79 aa8.55□□□□□ -1.04
PCDHB11-201ENST00000354757 FAM240AA0A1B0GVK7 77 aa8.55□□□□□ -1.04
PCDHB11-201ENST00000354757 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
PCDHB11-201ENST00000354757 A8MTW9 85 aa8.54□□□□□ -1.04
PCDHB11-201ENST00000354757 RBM3P98179 157 aaKnown RBP8.53□□□□□ -1.04
PCDHB11-201ENST00000354757 C14orf177Q52M58 125 aa8.53□□□□□ -1.04
PCDHB11-201ENST00000354757 Q6ZQY7 126 aa8.53□□□□□ -1.04
PCDHB11-201ENST00000354757 MDFIQ99750 246 aa8.53□□□□□ -1.04
PCDHB11-201ENST00000354757 CDK2AP2O75956 126 aa8.53□□□□□ -1.04
PCDHB11-201ENST00000354757 MXRA5Q9NR99 2828 aa8.52□□□□□ -1.04
PCDHB11-201ENST00000354757 TIMM17BO60830 172 aa8.52□□□□□ -1.04
PCDHB11-201ENST00000354757 K7EIL1 84 aa8.52□□□□□ -1.05
PCDHB11-201ENST00000354757 NUPR2A6NF83 97 aa8.51□□□□□ -1.05
PCDHB11-201ENST00000354757 Q6ZRU5 148 aa8.51□□□□□ -1.05
PCDHB11-201ENST00000354757 PLAC8L1A1L4L8 177 aa8.5□□□□□ -1.05
PCDHB11-201ENST00000354757 HRCT1Q6UXD1 115 aa8.5□□□□□ -1.05
PCDHB11-201ENST00000354757 TENM4Q6N022 2769 aa8.5□□□□□ -1.05
PCDHB11-201ENST00000354757 ZNF575Q86XF7 245 aa8.5□□□□□ -1.05
PCDHB11-201ENST00000354757 TRBV10-3A0A0K0K1G6 114 aa8.49□□□□□ -1.05
PCDHB11-201ENST00000354757 ENHOQ6UWT2 76 aa8.49□□□□□ -1.05
PCDHB11-201ENST00000354757 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
PCDHB11-201ENST00000354757 FUSP35637 526 aaKnown RBP eCLIP8.49□□□□□ -1.05
PCDHB11-201ENST00000354757 C10orf25Q5T742 122 aa8.48□□□□□ -1.05
PCDHB11-201ENST00000354757 TMEM256-PLSCR3K7ERE1 68 aa8.48□□□□□ -1.05
PCDHB11-201ENST00000354757 TRBV7-7A0A0K0K1E9 115 aa8.48□□□□□ -1.05
PCDHB11-201ENST00000354757 VPS13CQ709C8 3753 aa8.46□□□□□ -1.05
PCDHB11-201ENST00000354757 EGFEM1PQ0D2K5 195 aa8.46□□□□□ -1.05
PCDHB11-201ENST00000354757 CELSR1Q9NYQ6 3014 aa8.46□□□□□ -1.05
PCDHB11-201ENST00000354757 ZNF73O43830 326 aaPredicted RBP8.46□□□□□ -1.06
PCDHB11-201ENST00000354757 EIF4EBP3O60516 100 aaPredicted RBP8.46□□□□□ -1.06
PCDHB11-201ENST00000354757 SCXQ7RTU7 201 aa8.45□□□□□ -1.06
PCDHB11-201ENST00000354757 LINC00337Q8N6G1 96 aa8.45□□□□□ -1.06
PCDHB11-201ENST00000354757 M0R378 163 aa8.45□□□□□ -1.06
PCDHB11-201ENST00000354757 IGLV5-39A0A0G2JS06 123 aa8.45□□□□□ -1.06
PCDHB11-201ENST00000354757 JMJD7-PLA2G4BH0Y9G9 81 aa8.44□□□□□ -1.06
PCDHB11-201ENST00000354757 TMEM258P61165 79 aa8.44□□□□□ -1.06
PCDHB11-201ENST00000354757 NREPQ16612 68 aa8.44□□□□□ -1.06
PCDHB11-201ENST00000354757 UPK3BQ9BT76 320 aa8.44□□□□□ -1.06
PCDHB11-201ENST00000354757 PKIGQ9Y2B9 76 aa8.44□□□□□ -1.06
PCDHB11-201ENST00000354757 LINC00588Q9Y4M8 146 aa8.44□□□□□ -1.06
PCDHB11-201ENST00000354757 COX17Q14061 63 aa8.43□□□□□ -1.06
PCDHB11-201ENST00000354757 A0A087WYN8 130 aa8.43□□□□□ -1.06
PCDHB11-201ENST00000354757 NDUFC2-KCTD14E9PQ53 114 aa8.43□□□□□ -1.06
PCDHB11-201ENST00000354757 SOSTDC1Q6X4U4 206 aa8.43□□□□□ -1.06
PCDHB11-201ENST00000354757 LINC00846Q9NV44 126 aa8.43□□□□□ -1.06
PCDHB11-201ENST00000354757 LINC01556Q5JQF7 62 aa8.42□□□□□ -1.06
PCDHB11-201ENST00000354757 C3orf84H3BNL1 204 aa8.42□□□□□ -1.06
PCDHB11-201ENST00000354757 SNURFQ9Y675 71 aa8.42□□□□□ -1.06
PCDHB11-201ENST00000354757 STAB2Q8WWQ8 2551 aa8.42□□□□□ -1.06
PCDHB11-201ENST00000354757 CSMD2Q7Z408 3487 aa8.41□□□□□ -1.06
PCDHB11-201ENST00000354757 B9D2Q9BPU9 175 aa8.41□□□□□ -1.06
PCDHB11-201ENST00000354757 FAM236DA0A1B0GTK5 79 aa8.41□□□□□ -1.06
PCDHB11-201ENST00000354757 FAM236CP0DP71 79 aa8.41□□□□□ -1.06
PCDHB11-201ENST00000354757 FAM218AQ96MZ4 157 aa8.41□□□□□ -1.06
PCDHB11-201ENST00000354757 SMCR5Q8TEV8 140 aa8.4□□□□□ -1.06
PCDHB11-201ENST00000354757 BRK1Q8WUW1 75 aa8.4□□□□□ -1.06
PCDHB11-201ENST00000354757 ZFHX3Q15911 3703 aa8.4□□□□□ -1.06
PCDHB11-201ENST00000354757 LITAFQ99732 161 aa8.4□□□□□ -1.06
PCDHB11-201ENST00000354757 A0A0U1RQV1 116 aa8.4□□□□□ -1.07
PCDHB11-201ENST00000354757 CCKP06307 115 aa8.4□□□□□ -1.07
PCDHB11-201ENST00000354757 C6orf48Q9UBA6 75 aa8.39□□□□□ -1.07
PCDHB11-201ENST00000354757 CUBNO60494 3623 aa8.39□□□□□ -1.07
PCDHB11-201ENST00000354757 NDUFS5O43920 106 aa8.39□□□□□ -1.07
PCDHB11-201ENST00000354757 IGLV5-45A0A087WSX0 123 aa8.38□□□□□ -1.07
PCDHB11-201ENST00000354757 Q6JHZ5 121 aa8.37□□□□□ -1.07
PCDHB11-201ENST00000354757 MPLKIPQ8TAP9 179 aa8.37□□□□□ -1.07
PCDHB11-201ENST00000354757 RPL28P46779 137 aaKnown RBP8.36□□□□□ -1.07
PCDHB11-201ENST00000354757 C1orf134Q5TEV5 83 aa8.36□□□□□ -1.07
PCDHB11-201ENST00000354757 C4orf26Q17RF5 130 aa8.36□□□□□ -1.07
PCDHB11-201ENST00000354757 IGLV5-52A0A0A0MRZ9 124 aa8.36□□□□□ -1.07
PCDHB11-201ENST00000354757 IGLV9-49A0A0B4J1Y8 123 aa8.35□□□□□ -1.07
PCDHB11-201ENST00000354757 PRLHP81277 87 aa8.35□□□□□ -1.07
PCDHB11-201ENST00000354757 H0Y9J4 135 aa8.34□□□□□ -1.07
PCDHB11-201ENST00000354757 CRYGAP11844 174 aa8.34□□□□□ -1.07
PCDHB11-201ENST00000354757 NDUFC2O95298 119 aa8.33□□□□□ -1.08
PCDHB11-201ENST00000354757 H3BNG1 76 aa8.33□□□□□ -1.08
PCDHB11-201ENST00000354757 C2orf48Q96LS8 159 aa8.33□□□□□ -1.08
PCDHB11-201ENST00000354757 Q8N814 137 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms