RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 GAGE12HA6NDE8 117 aa7.53□□□□□ -1.2
CDRT1-202ENST00000354433 K7ERJ3 54 aa7.53□□□□□ -1.2
CDRT1-202ENST00000354433 C6orf226Q5I0X4 101 aa7.53□□□□□ -1.2
CDRT1-202ENST00000354433 MEIG1Q5JSS6 88 aa7.53□□□□□ -1.2
CDRT1-202ENST00000354433 H3BUT2 72 aa7.52□□□□□ -1.21
CDRT1-202ENST00000354433 CFC1BP0CG36 223 aa7.52□□□□□ -1.21
CDRT1-202ENST00000354433 CFC1P0CG37 223 aa7.52□□□□□ -1.21
CDRT1-202ENST00000354433 VAMP3Q15836 100 aa7.52□□□□□ -1.21
CDRT1-202ENST00000354433 DNAH8Q96JB1 4490 aa7.52□□□□□ -1.21
CDRT1-202ENST00000354433 A0A1W2PPM0 123 aa7.51□□□□□ -1.21
CDRT1-202ENST00000354433 KIAA0087Q14695 138 aa7.51□□□□□ -1.21
CDRT1-202ENST00000354433 FABP2P12104 132 aa7.5□□□□□ -1.21
CDRT1-202ENST00000354433 UBE2V1Q13404 147 aa7.5□□□□□ -1.21
CDRT1-202ENST00000354433 CFAP161Q6P656 301 aa7.5□□□□□ -1.21
CDRT1-202ENST00000354433 Q6ZSA8 131 aa7.5□□□□□ -1.21
CDRT1-202ENST00000354433 SCXQ7RTU7 201 aa7.5□□□□□ -1.21
CDRT1-202ENST00000354433 LINC00528Q8N1L1 170 aa7.5□□□□□ -1.21
CDRT1-202ENST00000354433 LINC00308Q8TCZ7 52 aa7.5□□□□□ -1.21
CDRT1-202ENST00000354433 PRO1854Q9UHT4 67 aa7.5□□□□□ -1.21
CDRT1-202ENST00000354433 USP17L23D6RBM5 183 aa7.5□□□□□ -1.21
CDRT1-202ENST00000354433 CKS1BP61024 79 aa7.5□□□□□ -1.21
CDRT1-202ENST00000354433 PLA2G1BP04054 148 aaKnown RBP7.49□□□□□ -1.21
CDRT1-202ENST00000354433 COX17Q14061 63 aa7.49□□□□□ -1.21
CDRT1-202ENST00000354433 KRTAP26-1Q6PEX3 210 aa7.49□□□□□ -1.21
CDRT1-202ENST00000354433 GTF2H5Q6ZYL4 71 aa7.49□□□□□ -1.21
CDRT1-202ENST00000354433 ERG28Q9UKR5 140 aa7.49□□□□□ -1.21
CDRT1-202ENST00000354433 GAGE10A6NGK3 116 aa7.47□□□□□ -1.21
CDRT1-202ENST00000354433 K7EP34 96 aa7.47□□□□□ -1.21
CDRT1-202ENST00000354433 TSPAN13O95857 204 aa7.47□□□□□ -1.21
CDRT1-202ENST00000354433 LYRM7Q5U5X0 104 aa7.47□□□□□ -1.21
CDRT1-202ENST00000354433 DAND5Q8N907 189 aa7.47□□□□□ -1.21
CDRT1-202ENST00000354433 MYCBP2O75592 4640 aa7.47□□□□□ -1.21
CDRT1-202ENST00000354433 F8WDY8 70 aa7.46□□□□□ -1.21
CDRT1-202ENST00000354433 EIF4EBP3O60516 100 aaPredicted RBP7.46□□□□□ -1.21
CDRT1-202ENST00000354433 LINC00158P58513 81 aa7.46□□□□□ -1.21
CDRT1-202ENST00000354433 SPAG11BQ08648 103 aa7.46□□□□□ -1.21
CDRT1-202ENST00000354433 MIR7-3HGQ8N6C7 128 aa7.46□□□□□ -1.21
CDRT1-202ENST00000354433 DMBT1Q9UGM3 2413 aaPredicted RBP7.46□□□□□ -1.22
CDRT1-202ENST00000354433 VPS13BQ7Z7G8 4022 aa7.46□□□□□ -1.22
CDRT1-202ENST00000354433 GVQW2A0A096LPI5 108 aaPredicted RBP7.46□□□□□ -1.22
CDRT1-202ENST00000354433 LOC107984156A0A0G2JMH3 177 aa7.46□□□□□ -1.22
CDRT1-202ENST00000354433 A0A0U1RRA0 63 aa7.46□□□□□ -1.22
CDRT1-202ENST00000354433 NPC2P61916 151 aa7.46□□□□□ -1.22
CDRT1-202ENST00000354433 SOSTDC1Q6X4U4 206 aa7.46□□□□□ -1.22
CDRT1-202ENST00000354433 ARL17AQ8IVW1 177 aa7.46□□□□□ -1.22
CDRT1-202ENST00000354433 CIRBP-AS1Q8TBR5 109 aa7.46□□□□□ -1.22
CDRT1-202ENST00000354433 NAA38Q9BRA0 125 aaKnown RBP7.46□□□□□ -1.22
CDRT1-202ENST00000354433 SPCS1Q9Y6A9 102 aa7.46□□□□□ -1.22
CDRT1-202ENST00000354433 FLG2Q5D862 2391 aaPredicted RBP7.45□□□□□ -1.22
CDRT1-202ENST00000354433 C2orf82Q6UX34 121 aa7.45□□□□□ -1.22
CDRT1-202ENST00000354433 J3QL48 77 aa7.44□□□□□ -1.22
CDRT1-202ENST00000354433 PFN2P35080 140 aa7.43□□□□□ -1.22
CDRT1-202ENST00000354433 C2orf48Q96LS8 159 aa7.43□□□□□ -1.22
CDRT1-202ENST00000354433 HERC1Q15751 4861 aa7.43□□□□□ -1.22
CDRT1-202ENST00000354433 SRRM2Q9UQ35 2752 aaKnown RBP7.42□□□□□ -1.22
CDRT1-202ENST00000354433 TRBV30A0A0K0K1B3 111 aa7.42□□□□□ -1.22
CDRT1-202ENST00000354433 ZNF561-AS1K7EIQ3 104 aa7.42□□□□□ -1.22
CDRT1-202ENST00000354433 C15orf56Q8N910 161 aa7.42□□□□□ -1.22
CDRT1-202ENST00000354433 C9orf163Q8N9P6 203 aa7.42□□□□□ -1.22
CDRT1-202ENST00000354433 SND1-IT1Q9HBX3 110 aa7.42□□□□□ -1.22
CDRT1-202ENST00000354433 TRBV20-1A0A075B6N2 111 aa7.41□□□□□ -1.22
CDRT1-202ENST00000354433 TRAV13-2A0A0B4J235 113 aa7.41□□□□□ -1.22
CDRT1-202ENST00000354433 UNQ6190/PRO20217Q6UXQ8 127 aa7.41□□□□□ -1.22
CDRT1-202ENST00000354433 RPL13AP40429 203 aaKnown RBP7.4□□□□□ -1.22
CDRT1-202ENST00000354433 Q1RN00 199 aa7.4□□□□□ -1.22
CDRT1-202ENST00000354433 NDUFC2O95298 119 aa7.39□□□□□ -1.23
CDRT1-202ENST00000354433 PSMB2P49721 201 aa7.39□□□□□ -1.23
CDRT1-202ENST00000354433 C10orf25Q5T742 122 aa7.39□□□□□ -1.23
CDRT1-202ENST00000354433 H7C2G1 150 aa7.38□□□□□ -1.23
CDRT1-202ENST00000354433 COX6CP09669 75 aa7.38□□□□□ -1.23
CDRT1-202ENST00000354433 RPL37AP61513 92 aaKnown RBP7.38□□□□□ -1.23
CDRT1-202ENST00000354433 CNBPP62633 177 aaKnown RBP7.38□□□□□ -1.23
CDRT1-202ENST00000354433 DPH3Q96FX2 82 aa7.38□□□□□ -1.23
CDRT1-202ENST00000354433 CAMK2N2Q96S95 79 aa7.38□□□□□ -1.23
CDRT1-202ENST00000354433 C6orf48Q9UBA6 75 aa7.38□□□□□ -1.23
CDRT1-202ENST00000354433 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.38□□□□□ -1.23
CDRT1-202ENST00000354433 SCGB1C2P0DMR2 95 aa7.37□□□□□ -1.23
CDRT1-202ENST00000354433 HIGD2BQ4VC39 106 aa7.37□□□□□ -1.23
CDRT1-202ENST00000354433 IGKV2-28A0A075B6P5 120 aa7.37□□□□□ -1.23
CDRT1-202ENST00000354433 IGKV2D-28P01615 120 aa7.37□□□□□ -1.23
CDRT1-202ENST00000354433 C9orf116Q5BN46 136 aaPredicted RBP7.37□□□□□ -1.23
CDRT1-202ENST00000354433 LINC00526Q96FQ7 95 aa7.37□□□□□ -1.23
CDRT1-202ENST00000354433 F8W1H4 67 aa7.36□□□□□ -1.23
CDRT1-202ENST00000354433 PANO1I0J062 215 aa7.36□□□□□ -1.23
CDRT1-202ENST00000354433 TRIAP1O43715 76 aa7.36□□□□□ -1.23
CDRT1-202ENST00000354433 TCL1BO95988 128 aa7.36□□□□□ -1.23
CDRT1-202ENST00000354433 RNF151Q2KHN1 245 aa7.36□□□□□ -1.23
CDRT1-202ENST00000354433 SDIM1Q6ZPB5 146 aa7.36□□□□□ -1.23
CDRT1-202ENST00000354433 LINC00337Q8N6G1 96 aa7.36□□□□□ -1.23
CDRT1-202ENST00000354433 H3BMG7 143 aa7.35□□□□□ -1.23
CDRT1-202ENST00000354433 SLPIP03973 132 aa7.34□□□□□ -1.23
CDRT1-202ENST00000354433 CHTF8P0CG12 524 aa7.34□□□□□ -1.23
CDRT1-202ENST00000354433 RPL28P46779 137 aaKnown RBP7.34□□□□□ -1.23
CDRT1-202ENST00000354433 SYCNQ0VAF6 134 aa7.34□□□□□ -1.23
CDRT1-202ENST00000354433 ATXN8Q156A1 80 aa7.34□□□□□ -1.23
CDRT1-202ENST00000354433 Q6ZRU5 148 aa7.34□□□□□ -1.23
CDRT1-202ENST00000354433 KRTAP29-1A8MX34 341 aaPredicted RBP7.33□□□□□ -1.24
CDRT1-202ENST00000354433 KRTAP10-4P60372 401 aaPredicted RBP7.33□□□□□ -1.24
CDRT1-202ENST00000354433 IGKV2-24A0A0C4DH68 120 aa7.33□□□□□ -1.24
CDRT1-202ENST00000354433 NDUFC2-KCTD14E9PQ53 114 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms