RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TENM2Q9NT68 2774 aa4.59□□□□□ -1.67
TRIM55-203ENST00000350034 CMYA5Q8N3K9 4069 aa4.59□□□□□ -1.67
TRIM55-203ENST00000350034 C9JAW5 83 aa4.59□□□□□ -1.67
TRIM55-203ENST00000350034 SLC25A20O43772 301 aa4.59□□□□□ -1.67
TRIM55-203ENST00000350034 TEN1Q86WV5 123 aa4.59□□□□□ -1.67
TRIM55-203ENST00000350034 CLEC2BQ92478 149 aa4.59□□□□□ -1.67
TRIM55-203ENST00000350034 LINC00526Q96FQ7 95 aa4.59□□□□□ -1.67
TRIM55-203ENST00000350034 C1orf43Q9BWL3 253 aa4.59□□□□□ -1.67
TRIM55-203ENST00000350034 H3BT86 120 aa4.58□□□□□ -1.68
TRIM55-203ENST00000350034 ANKRD29Q8N6D5 301 aa4.58□□□□□ -1.68
TRIM55-203ENST00000350034 Q8NDZ9 215 aa4.58□□□□□ -1.68
TRIM55-203ENST00000350034 SMIM11BQ8TCY0 68 aa4.58□□□□□ -1.68
TRIM55-203ENST00000350034 CARD19Q96LW7 228 aa4.58□□□□□ -1.68
TRIM55-203ENST00000350034 IGKV2D-24A0A075B6R9 120 aa4.57□□□□□ -1.68
TRIM55-203ENST00000350034 ZNF561-AS1K7EIQ3 104 aa4.57□□□□□ -1.68
TRIM55-203ENST00000350034 TRACP01848 142 aa4.57□□□□□ -1.68
TRIM55-203ENST00000350034 NHLRC4P0CG21 123 aaPredicted RBP4.57□□□□□ -1.68
TRIM55-203ENST00000350034 HIGD2BQ4VC39 106 aa4.57□□□□□ -1.68
TRIM55-203ENST00000350034 PPDPFLQ8WWR9 84 aa4.57□□□□□ -1.68
TRIM55-203ENST00000350034 APLNQ9ULZ1 77 aa4.57□□□□□ -1.68
TRIM55-203ENST00000350034 H0YGX0 51 aa4.56□□□□□ -1.68
TRIM55-203ENST00000350034 PRR3P79522 188 aaKnown RBP4.56□□□□□ -1.68
TRIM55-203ENST00000350034 Q6ZRU5 148 aa4.56□□□□□ -1.68
TRIM55-203ENST00000350034 FAM218AQ96MZ4 157 aa4.56□□□□□ -1.68
TRIM55-203ENST00000350034 CAMK2N2Q96S95 79 aa4.56□□□□□ -1.68
TRIM55-203ENST00000350034 J3QR89 54 aa4.55□□□□□ -1.68
TRIM55-203ENST00000350034 LORP23490 312 aaPredicted RBP4.55□□□□□ -1.68
TRIM55-203ENST00000350034 RNF151Q2KHN1 245 aa4.55□□□□□ -1.68
TRIM55-203ENST00000350034 RMI2Q96E14 147 aa4.55□□□□□ -1.68
TRIM55-203ENST00000350034 TMEM126AQ9H061 195 aa4.55□□□□□ -1.68
TRIM55-203ENST00000350034 HUWE1Q7Z6Z7 4374 aaKnown RBP4.55□□□□□ -1.68
TRIM55-203ENST00000350034 IGLV6-57P01721 117 aa4.54□□□□□ -1.68
TRIM55-203ENST00000350034 SYCNQ0VAF6 134 aa4.54□□□□□ -1.68
TRIM55-203ENST00000350034 CASC10Q5T4H9 136 aa4.54□□□□□ -1.68
TRIM55-203ENST00000350034 OR13C6PQ8NH95 151 aa4.54□□□□□ -1.68
TRIM55-203ENST00000350034 Q9HAA7 133 aa4.54□□□□□ -1.68
TRIM55-203ENST00000350034 DYNC2H1Q8NCM8 4307 aaKnown RBP4.53□□□□□ -1.68
TRIM55-203ENST00000350034 A0A1B0GX51 115 aa4.53□□□□□ -1.68
TRIM55-203ENST00000350034 USP17L23D6RBM5 183 aa4.53□□□□□ -1.68
TRIM55-203ENST00000350034 NDUFC2-KCTD14E9PQ53 114 aa4.53□□□□□ -1.68
TRIM55-203ENST00000350034 SLPIP03973 132 aa4.53□□□□□ -1.68
TRIM55-203ENST00000350034 TLX1NBP0CAT3 122 aa4.53□□□□□ -1.68
TRIM55-203ENST00000350034 VPREB1P12018 145 aa4.53□□□□□ -1.68
TRIM55-203ENST00000350034 LINC00167Q96N53 147 aa4.53□□□□□ -1.68
TRIM55-203ENST00000350034 C22orf24Q9Y442 160 aa4.53□□□□□ -1.68
TRIM55-203ENST00000350034 KIAA1109Q2LD37 5005 aa4.53□□□□□ -1.68
TRIM55-203ENST00000350034 A0A087WYN8 130 aa4.52□□□□□ -1.69
TRIM55-203ENST00000350034 NUPR2A6NF83 97 aa4.52□□□□□ -1.69
TRIM55-203ENST00000350034 NCR3O14931 201 aa4.52□□□□□ -1.69
TRIM55-203ENST00000350034 BAALC-AS2P0C853 105 aa4.52□□□□□ -1.69
TRIM55-203ENST00000350034 VPS25Q9BRG1 176 aa4.52□□□□□ -1.69
TRIM55-203ENST00000350034 KRTAP1-5Q9BYS1 174 aa4.52□□□□□ -1.69
TRIM55-203ENST00000350034 XAGE1AQ9HD64 81 aa4.52□□□□□ -1.69
TRIM55-203ENST00000350034 CBY1Q9Y3M2 126 aa4.52□□□□□ -1.69
TRIM55-203ENST00000350034 HERC1Q15751 4861 aa4.52□□□□□ -1.69
TRIM55-203ENST00000350034 RPL18AQ02543 176 aaKnown RBP4.51□□□□□ -1.69
TRIM55-203ENST00000350034 Q6ZRP5 223 aa4.51□□□□□ -1.69
TRIM55-203ENST00000350034 PLA2G2DQ9UNK4 145 aa4.51□□□□□ -1.69
TRIM55-203ENST00000350034 ABCA13Q86UQ4 5058 aa4.51□□□□□ -1.69
TRIM55-203ENST00000350034 SACSQ9NZJ4 4579 aa4.5□□□□□ -1.69
TRIM55-203ENST00000350034 TRBV10-3A0A0K0K1G6 114 aa4.5□□□□□ -1.69
TRIM55-203ENST00000350034 TEX49A0A1B0GTD5 131 aa4.5□□□□□ -1.69
TRIM55-203ENST00000350034 M0R378 163 aa4.5□□□□□ -1.69
TRIM55-203ENST00000350034 LECT2O14960 151 aa4.5□□□□□ -1.69
TRIM55-203ENST00000350034 C6orf99Q4VX62 202 aa4.5□□□□□ -1.69
TRIM55-203ENST00000350034 S100A7L2Q5SY68 101 aa4.5□□□□□ -1.69
TRIM55-203ENST00000350034 C9orf129Q5T035 196 aaKnown RBP4.5□□□□□ -1.69
TRIM55-203ENST00000350034 CDIP1Q9H305 208 aa4.5□□□□□ -1.69
TRIM55-203ENST00000350034 DNAH1Q9P2D7 4330 aa4.5□□□□□ -1.69
TRIM55-203ENST00000350034 IGLV5-37A0A075B6J1 123 aa4.49□□□□□ -1.69
TRIM55-203ENST00000350034 GAGE2EQ4V326 116 aa4.49□□□□□ -1.69
TRIM55-203ENST00000350034 LINC00575Q6W349 94 aa4.49□□□□□ -1.69
TRIM55-203ENST00000350034 UBE2DNLQ8IWF7 75 aa4.49□□□□□ -1.69
TRIM55-203ENST00000350034 Q8N814 137 aa4.49□□□□□ -1.69
TRIM55-203ENST00000350034 OBSCN-AS1Q96MR7 158 aa4.49□□□□□ -1.69
TRIM55-203ENST00000350034 GAGE2DQ9UEU5 116 aa4.49□□□□□ -1.69
TRIM55-203ENST00000350034 TRBV7-6A0A0J9YX20 115 aa4.48□□□□□ -1.69
TRIM55-203ENST00000350034 DNAL4O96015 105 aa4.48□□□□□ -1.69
TRIM55-203ENST00000350034 DNAH9Q9NYC9 4486 aa4.48□□□□□ -1.69
TRIM55-203ENST00000350034 TRAV23DV6A0A075B6W5 121 aa4.47□□□□□ -1.69
TRIM55-203ENST00000350034 KRTAP9-6A0A140TA67 174 aa4.47□□□□□ -1.69
TRIM55-203ENST00000350034 FAM240AA0A1B0GVK7 77 aa4.47□□□□□ -1.69
TRIM55-203ENST00000350034 CNBPP62633 177 aaKnown RBP4.47□□□□□ -1.69
TRIM55-203ENST00000350034 TTC32Q5I0X7 151 aa4.47□□□□□ -1.69
TRIM55-203ENST00000350034 SERTAD4-AS1Q5TG53 156 aa4.47□□□□□ -1.69
TRIM55-203ENST00000350034 DIRC1Q969H9 104 aa4.47□□□□□ -1.69
TRIM55-203ENST00000350034 NBDYA0A0U1RRE5 68 aa4.46□□□□□ -1.7
TRIM55-203ENST00000350034 LOC107984640A0A0U1RRK4 108 aa4.46□□□□□ -1.7
TRIM55-203ENST00000350034 ZNF73O43830 326 aaPredicted RBP4.46□□□□□ -1.7
TRIM55-203ENST00000350034 Q6ZRN7 208 aaPredicted RBP4.46□□□□□ -1.7
TRIM55-203ENST00000350034 KRTAP7-1Q8IUC3 87 aa4.46□□□□□ -1.7
TRIM55-203ENST00000350034 SIGMAR1Q99720 223 aa4.46□□□□□ -1.7
TRIM55-203ENST00000350034 KCNQ1DNQ9H478 68 aa4.46□□□□□ -1.7
TRIM55-203ENST00000350034 ORMDL1Q9P0S3 153 aa4.46□□□□□ -1.7
TRIM55-203ENST00000350034 hADV29S1A0JD25 119 aa4.45□□□□□ -1.7
TRIM55-203ENST00000350034 LRCOL1A6NCL2 159 aa4.45□□□□□ -1.7
TRIM55-203ENST00000350034 INAFM2P0DMQ5 153 aa4.45□□□□□ -1.7
TRIM55-203ENST00000350034 COX7BP24311 80 aa4.45□□□□□ -1.7
TRIM55-203ENST00000350034 ELOF1P60002 83 aaKnown RBP4.45□□□□□ -1.7
TRIM55-203ENST00000350034 C14orf177Q52M58 125 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms