RNA–Protein interactions for RNA: ENST00000346606.10

CSHL1-203, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-203ENST00000346606 TSPAN13O95857 204 aa8.61□□□□□ -1.03
CSHL1-203ENST00000346606 RPL13AP40429 203 aaKnown RBP8.61□□□□□ -1.03
CSHL1-203ENST00000346606 LINC00158P58513 81 aa8.61□□□□□ -1.03
CSHL1-203ENST00000346606 LINC00167Q96N53 147 aa8.61□□□□□ -1.03
CSHL1-203ENST00000346606 SND1-IT1Q9HBX3 110 aa8.61□□□□□ -1.03
CSHL1-203ENST00000346606 HIST1H2BKO60814 126 aa8.6□□□□□ -1.03
CSHL1-203ENST00000346606 HIST1H2BJP06899 126 aa8.6□□□□□ -1.03
CSHL1-203ENST00000346606 HIST1H2BOP23527 126 aa8.6□□□□□ -1.03
CSHL1-203ENST00000346606 HIST1H2BBP33778 126 aa8.6□□□□□ -1.03
CSHL1-203ENST00000346606 HIST1H2BDP58876 126 aa8.6□□□□□ -1.03
CSHL1-203ENST00000346606 HIST1H2BCP62807 126 aa8.6□□□□□ -1.03
CSHL1-203ENST00000346606 HIST2H2BEQ16778 126 aa8.6□□□□□ -1.03
CSHL1-203ENST00000346606 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.6□□□□□ -1.03
CSHL1-203ENST00000346606 HIST1H2BHQ93079 126 aa8.6□□□□□ -1.03
CSHL1-203ENST00000346606 HIST1H2BNQ99877 126 aa8.6□□□□□ -1.03
CSHL1-203ENST00000346606 HIST1H2BMQ99879 126 aa8.6□□□□□ -1.03
CSHL1-203ENST00000346606 MAP1LC3CQ9BXW4 147 aa8.6□□□□□ -1.03
CSHL1-203ENST00000346606 IGLV5-37A0A075B6J1 123 aa8.59□□□□□ -1.03
CSHL1-203ENST00000346606 A0A0U1RRA0 63 aa8.59□□□□□ -1.03
CSHL1-203ENST00000346606 PLNP26678 52 aa8.59□□□□□ -1.03
CSHL1-203ENST00000346606 PMCHL2Q9BQD1 86 aa8.59□□□□□ -1.03
CSHL1-203ENST00000346606 ATP6V1G1O75348 118 aa8.58□□□□□ -1.04
CSHL1-203ENST00000346606 DPM2O94777 84 aa8.58□□□□□ -1.04
CSHL1-203ENST00000346606 RPL24P83731 157 aaKnown RBP8.58□□□□□ -1.04
CSHL1-203ENST00000346606 MEIG1Q5JSS6 88 aa8.58□□□□□ -1.04
CSHL1-203ENST00000346606 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
CSHL1-203ENST00000346606 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
CSHL1-203ENST00000346606 ZNF861PO60384 105 aa8.56□□□□□ -1.04
CSHL1-203ENST00000346606 BCE1O60756 84 aa8.56□□□□□ -1.04
CSHL1-203ENST00000346606 IGKCP01834 107 aa8.56□□□□□ -1.04
CSHL1-203ENST00000346606 SMIM13P0DJ93 91 aa8.56□□□□□ -1.04
CSHL1-203ENST00000346606 HERVK_113P61574 105 aa8.56□□□□□ -1.04
CSHL1-203ENST00000346606 HERV-K104P63124 156 aa8.56□□□□□ -1.04
CSHL1-203ENST00000346606 IGKV2-28A0A075B6P5 120 aa8.55□□□□□ -1.04
CSHL1-203ENST00000346606 LEPROTO15243 131 aa8.55□□□□□ -1.04
CSHL1-203ENST00000346606 IGKV2D-28P01615 120 aa8.55□□□□□ -1.04
CSHL1-203ENST00000346606 VPREB1P12018 145 aa8.55□□□□□ -1.04
CSHL1-203ENST00000346606 PLEKHB2Q96CS7 222 aa8.55□□□□□ -1.04
CSHL1-203ENST00000346606 LINC00587B1AMM8 73 aa8.54□□□□□ -1.04
CSHL1-203ENST00000346606 A0A087X002 238 aa8.53□□□□□ -1.04
CSHL1-203ENST00000346606 RPL28P46779 137 aaKnown RBP8.53□□□□□ -1.04
CSHL1-203ENST00000346606 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
CSHL1-203ENST00000346606 MIR7-3HGQ8N6C7 128 aa8.53□□□□□ -1.04
CSHL1-203ENST00000346606 SYS1-DBNDD2H3BUS1 97 aa8.52□□□□□ -1.05
CSHL1-203ENST00000346606 J3QQQ9 107 aa8.52□□□□□ -1.05
CSHL1-203ENST00000346606 LGALS3P17931 250 aaKnown RBP8.52□□□□□ -1.05
CSHL1-203ENST00000346606 UBE2AP49459 152 aa8.52□□□□□ -1.05
CSHL1-203ENST00000346606 Q8NDZ9 215 aa8.52□□□□□ -1.05
CSHL1-203ENST00000346606 BOD1L2Q8IYS8 172 aa8.51□□□□□ -1.05
CSHL1-203ENST00000346606 FSIP2Q5CZC0 6907 aa8.5□□□□□ -1.05
CSHL1-203ENST00000346606 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
CSHL1-203ENST00000346606 NMUP48645 174 aa8.49□□□□□ -1.05
CSHL1-203ENST00000346606 RETNLBQ9BQ08 111 aa8.49□□□□□ -1.05
CSHL1-203ENST00000346606 M0R378 163 aa8.48□□□□□ -1.05
CSHL1-203ENST00000346606 PET117Q6UWS5 81 aa8.48□□□□□ -1.05
CSHL1-203ENST00000346606 FAM19A1Q7Z5A9 133 aa8.48□□□□□ -1.05
CSHL1-203ENST00000346606 TMEM126AQ9H061 195 aa8.48□□□□□ -1.05
CSHL1-203ENST00000346606 COA6Q5JTJ3 125 aaKnown RBP8.47□□□□□ -1.05
CSHL1-203ENST00000346606 LINC01545Q5VT33 79 aa8.47□□□□□ -1.05
CSHL1-203ENST00000346606 DAND5Q8N907 189 aa8.47□□□□□ -1.05
CSHL1-203ENST00000346606 E9PLD3 99 aa8.46□□□□□ -1.06
CSHL1-203ENST00000346606 NCR3O14931 201 aa8.46□□□□□ -1.06
CSHL1-203ENST00000346606 S100A1P23297 94 aa8.46□□□□□ -1.06
CSHL1-203ENST00000346606 KRTDAPP60985 99 aa8.46□□□□□ -1.06
CSHL1-203ENST00000346606 TYMSOSQ8TAI1 123 aa8.46□□□□□ -1.06
CSHL1-203ENST00000346606 ANAPC11Q9NYG5 84 aa8.46□□□□□ -1.06
CSHL1-203ENST00000346606 C3orf79P0CE67 100 aa8.45□□□□□ -1.06
CSHL1-203ENST00000346606 PRLHP81277 87 aa8.45□□□□□ -1.06
CSHL1-203ENST00000346606 LCE2DQ5TA82 110 aaPredicted RBP8.45□□□□□ -1.06
CSHL1-203ENST00000346606 KRTAP13-1Q8IUC0 172 aa8.45□□□□□ -1.06
CSHL1-203ENST00000346606 CRYGAP11844 174 aa8.44□□□□□ -1.06
CSHL1-203ENST00000346606 KRTAP13-2Q52LG2 175 aa8.44□□□□□ -1.06
CSHL1-203ENST00000346606 MIEN1Q9BRT3 115 aa8.44□□□□□ -1.06
CSHL1-203ENST00000346606 CDIP1Q9H305 208 aa8.44□□□□□ -1.06
CSHL1-203ENST00000346606 IGKV2D-26A0A0A0MRZ7 120 aa8.43□□□□□ -1.06
CSHL1-203ENST00000346606 TPRXLQ17RH7 258 aa8.43□□□□□ -1.06
CSHL1-203ENST00000346606 CRCT1Q9UGL9 99 aa8.43□□□□□ -1.06
CSHL1-203ENST00000346606 A0A0J9YXY3 114 aa8.42□□□□□ -1.06
CSHL1-203ENST00000346606 LOC107984156A0A0G2JMH3 177 aa8.4□□□□□ -1.06
CSHL1-203ENST00000346606 TRBV10-3A0A0K0K1G6 114 aa8.4□□□□□ -1.06
CSHL1-203ENST00000346606 C20orf202A1L168 122 aa8.4□□□□□ -1.06
CSHL1-203ENST00000346606 PRYO14603 147 aa8.4□□□□□ -1.06
CSHL1-203ENST00000346606 NPC2P61916 151 aa8.4□□□□□ -1.06
CSHL1-203ENST00000346606 S100A12P80511 92 aa8.4□□□□□ -1.06
CSHL1-203ENST00000346606 ARL17AQ8IVW1 177 aa8.4□□□□□ -1.06
CSHL1-203ENST00000346606 HIGD2AQ9BW72 106 aa8.4□□□□□ -1.06
CSHL1-203ENST00000346606 IGLV7-46A0A075B6I9 117 aa8.39□□□□□ -1.07
CSHL1-203ENST00000346606 ADAMTSL4-AS1Q5T5F5 129 aa8.39□□□□□ -1.07
CSHL1-203ENST00000346606 ZNF815PA8K554 130 aa8.38□□□□□ -1.07
CSHL1-203ENST00000346606 KCNQ1DNQ9H478 68 aa8.38□□□□□ -1.07
CSHL1-203ENST00000346606 TRBV10-2A0A0K0K1G8 114 aa8.37□□□□□ -1.07
CSHL1-203ENST00000346606 DDTP30046 118 aa8.37□□□□□ -1.07
CSHL1-203ENST00000346606 SPANXB1Q9NS25 103 aaPredicted RBP8.37□□□□□ -1.07
CSHL1-203ENST00000346606 ETDCA0A1B0GVM5 59 aa8.36□□□□□ -1.07
CSHL1-203ENST00000346606 NDUFC2O95298 119 aa8.36□□□□□ -1.07
CSHL1-203ENST00000346606 S100A2P29034 98 aa8.36□□□□□ -1.07
CSHL1-203ENST00000346606 S100A7L2Q5SY68 101 aa8.36□□□□□ -1.07
CSHL1-203ENST00000346606 SOSTDC1Q6X4U4 206 aa8.36□□□□□ -1.07
CSHL1-203ENST00000346606 ATOH7Q8N100 152 aa8.36□□□□□ -1.07
CSHL1-203ENST00000346606 LINC00337Q8N6G1 96 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms