RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 HERV-K104P63124 156 aa11.93□□□□□ -0.5
CLTA-202ENST00000345519 KRTAP13-1Q8IUC0 172 aa11.93□□□□□ -0.5
CLTA-202ENST00000345519 NKAPP1Q8N9T2 125 aa11.93□□□□□ -0.5
CLTA-202ENST00000345519 IGLV1-50A0A075B6I6 118 aa11.91□□□□□ -0.5
CLTA-202ENST00000345519 FABP4P15090 132 aa11.91□□□□□ -0.5
CLTA-202ENST00000345519 TSPEAR-AS2P59090 65 aa11.91□□□□□ -0.5
CLTA-202ENST00000345519 RPL37AP8A6NKH3 93 aa11.9□□□□□ -0.5
CLTA-202ENST00000345519 H0Y8G0 127 aa11.9□□□□□ -0.5
CLTA-202ENST00000345519 DPM2O94777 84 aa11.9□□□□□ -0.5
CLTA-202ENST00000345519 RPL24P83731 157 aaKnown RBP11.9□□□□□ -0.5
CLTA-202ENST00000345519 UBR4Q5T4S7 5183 aa11.9□□□□□ -0.5
CLTA-202ENST00000345519 LEPROTO15243 131 aa11.89□□□□□ -0.51
CLTA-202ENST00000345519 COA6Q5JTJ3 125 aaKnown RBP11.89□□□□□ -0.51
CLTA-202ENST00000345519 NDUFA12Q9UI09 145 aa11.89□□□□□ -0.51
CLTA-202ENST00000345519 IGKCP01834 107 aa11.88□□□□□ -0.51
CLTA-202ENST00000345519 MAP1LC3CQ9BXW4 147 aa11.88□□□□□ -0.51
CLTA-202ENST00000345519 LRP2P98164 4655 aa11.87□□□□□ -0.51
CLTA-202ENST00000345519 GAGE10A6NGK3 116 aa11.87□□□□□ -0.51
CLTA-202ENST00000345519 LINC00587B1AMM8 73 aa11.87□□□□□ -0.51
CLTA-202ENST00000345519 RPL28P46779 137 aaKnown RBP11.87□□□□□ -0.51
CLTA-202ENST00000345519 LINC00158P58513 81 aa11.87□□□□□ -0.51
CLTA-202ENST00000345519 PLEKHB2Q96CS7 222 aa11.87□□□□□ -0.51
CLTA-202ENST00000345519 LOC107984156A0A0G2JMH3 177 aa11.86□□□□□ -0.51
CLTA-202ENST00000345519 MYMXA0A1B0GTQ4 84 aa11.86□□□□□ -0.51
CLTA-202ENST00000345519 SMIM13P0DJ93 91 aa11.86□□□□□ -0.51
CLTA-202ENST00000345519 ARL17AQ8IVW1 177 aa11.86□□□□□ -0.51
CLTA-202ENST00000345519 PRR26Q8N8Z3 221 aa11.85□□□□□ -0.51
CLTA-202ENST00000345519 IGKV2-28A0A075B6P5 120 aa11.84□□□□□ -0.51
CLTA-202ENST00000345519 SYS1-DBNDD2H3BUS1 97 aa11.84□□□□□ -0.51
CLTA-202ENST00000345519 J3QQQ9 107 aa11.84□□□□□ -0.51
CLTA-202ENST00000345519 IGKV2D-28P01615 120 aa11.84□□□□□ -0.51
CLTA-202ENST00000345519 NMUP48645 174 aa11.84□□□□□ -0.51
CLTA-202ENST00000345519 PMCHL2Q9BQD1 86 aa11.84□□□□□ -0.51
CLTA-202ENST00000345519 HERVK_113P61574 105 aa11.83□□□□□ -0.52
CLTA-202ENST00000345519 MIR7-3HGQ8N6C7 128 aa11.83□□□□□ -0.52
CLTA-202ENST00000345519 TMEM126AQ9H061 195 aa11.83□□□□□ -0.52
CLTA-202ENST00000345519 MEIG1Q5JSS6 88 aa11.82□□□□□ -0.52
CLTA-202ENST00000345519 LINC01545Q5VT33 79 aa11.82□□□□□ -0.52
CLTA-202ENST00000345519 IGKV2D-26A0A0A0MRZ7 120 aa11.81□□□□□ -0.52
CLTA-202ENST00000345519 A0A0U1RRA0 63 aa11.81□□□□□ -0.52
CLTA-202ENST00000345519 E9PLD3 99 aa11.81□□□□□ -0.52
CLTA-202ENST00000345519 M0R378 163 aa11.81□□□□□ -0.52
CLTA-202ENST00000345519 RPL13AP40429 203 aaKnown RBP11.81□□□□□ -0.52
CLTA-202ENST00000345519 PET117Q6UWS5 81 aa11.79□□□□□ -0.52
CLTA-202ENST00000345519 TMEM238C9JI98 176 aa11.78□□□□□ -0.52
CLTA-202ENST00000345519 BOD1L2Q8IYS8 172 aa11.77□□□□□ -0.53
CLTA-202ENST00000345519 LGALS3P17931 250 aaKnown RBP11.76□□□□□ -0.53
CLTA-202ENST00000345519 SPRR1AP35321 89 aa11.76□□□□□ -0.53
CLTA-202ENST00000345519 UBE2AP49459 152 aa11.76□□□□□ -0.53
CLTA-202ENST00000345519 A0A087X002 238 aa11.75□□□□□ -0.53
CLTA-202ENST00000345519 ATP6V1G1O75348 118 aa11.75□□□□□ -0.53
CLTA-202ENST00000345519 C3orf79P0CE67 100 aa11.75□□□□□ -0.53
CLTA-202ENST00000345519 PRYO14603 147 aa11.74□□□□□ -0.53
CLTA-202ENST00000345519 KCNQ1DNQ9H478 68 aa11.74□□□□□ -0.53
CLTA-202ENST00000345519 TRBV10-2A0A0K0K1G8 114 aa11.73□□□□□ -0.53
CLTA-202ENST00000345519 KRTAP4-16G5E9R7 235 aaPredicted RBP11.73□□□□□ -0.53
CLTA-202ENST00000345519 PRLHP81277 87 aa11.73□□□□□ -0.53
CLTA-202ENST00000345519 FAM229BQ4G0N7 80 aa11.73□□□□□ -0.53
CLTA-202ENST00000345519 A0A0J9YXY3 114 aa11.72□□□□□ -0.53
CLTA-202ENST00000345519 FAM19A1Q7Z5A9 133 aa11.72□□□□□ -0.53
CLTA-202ENST00000345519 DAND5Q8N907 189 aa11.72□□□□□ -0.53
CLTA-202ENST00000345519 LPAP08519 4548 aa11.71□□□□□ -0.53
CLTA-202ENST00000345519 NDUFC2O95298 119 aa11.71□□□□□ -0.53
CLTA-202ENST00000345519 S100A1P23297 94 aa11.71□□□□□ -0.53
CLTA-202ENST00000345519 LINC00337Q8N6G1 96 aa11.71□□□□□ -0.53
CLTA-202ENST00000345519 NCR3O14931 201 aa11.7□□□□□ -0.54
CLTA-202ENST00000345519 CRYGAP11844 174 aa11.69□□□□□ -0.54
CLTA-202ENST00000345519 LITAFQ99732 161 aa11.69□□□□□ -0.54
CLTA-202ENST00000345519 TRBV10-3A0A0K0K1G6 114 aa11.68□□□□□ -0.54
CLTA-202ENST00000345519 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
CLTA-202ENST00000345519 SPANXB1Q9NS25 103 aaPredicted RBP11.68□□□□□ -0.54
CLTA-202ENST00000345519 TIMM17BO60830 172 aa11.67□□□□□ -0.54
CLTA-202ENST00000345519 KRTAP13-2Q52LG2 175 aa11.67□□□□□ -0.54
CLTA-202ENST00000345519 SOSTDC1Q6X4U4 206 aa11.67□□□□□ -0.54
CLTA-202ENST00000345519 EIF4EBP3O60516 100 aaPredicted RBP11.65□□□□□ -0.54
CLTA-202ENST00000345519 MIEN1Q9BRT3 115 aa11.65□□□□□ -0.54
CLTA-202ENST00000345519 IGLV6-57P01721 117 aa11.64□□□□□ -0.55
CLTA-202ENST00000345519 KRTDAPP60985 99 aa11.64□□□□□ -0.55
CLTA-202ENST00000345519 ANAPC11Q9NYG5 84 aa11.63□□□□□ -0.55
CLTA-202ENST00000345519 DDTP30046 118 aa11.62□□□□□ -0.55
CLTA-202ENST00000345519 AKR1D1P51857 326 aa11.61□□□□□ -0.55
CLTA-202ENST00000345519 TYMSOSQ8TAI1 123 aa11.61□□□□□ -0.55
CLTA-202ENST00000345519 HIGD2AQ9BW72 106 aa11.61□□□□□ -0.55
CLTA-202ENST00000345519 C20orf202A1L168 122 aa11.6□□□□□ -0.55
CLTA-202ENST00000345519 ZNF815PA8K554 130 aa11.6□□□□□ -0.55
CLTA-202ENST00000345519 SMCR5Q8TEV8 140 aa11.6□□□□□ -0.55
CLTA-202ENST00000345519 SPRR4Q96PI1 79 aa11.6□□□□□ -0.55
CLTA-202ENST00000345519 TTTY13Q9BZ97 58 aa11.6□□□□□ -0.55
CLTA-202ENST00000345519 B5MCH6 92 aa11.59□□□□□ -0.55
CLTA-202ENST00000345519 CTAG1AP78358 180 aa11.59□□□□□ -0.55
CLTA-202ENST00000345519 HIST3H2BBQ8N257 126 aa11.59□□□□□ -0.55
CLTA-202ENST00000345519 LINC00308Q8TCZ7 52 aa11.59□□□□□ -0.55
CLTA-202ENST00000345519 SPANXCQ9NY87 97 aa11.59□□□□□ -0.55
CLTA-202ENST00000345519 S100A12P80511 92 aa11.58□□□□□ -0.56
CLTA-202ENST00000345519 PPDPFQ9H3Y8 114 aa11.58□□□□□ -0.56
CLTA-202ENST00000345519 ETDCA0A1B0GVM5 59 aa11.57□□□□□ -0.56
CLTA-202ENST00000345519 ANKRD39Q53RE8 183 aa11.57□□□□□ -0.56
CLTA-202ENST00000345519 ZNF706Q9Y5V0 76 aaPredicted RBP11.57□□□□□ -0.56
CLTA-202ENST00000345519 RNF213Q63HN8 5207 aa11.56□□□□□ -0.56
CLTA-202ENST00000345519 Q6ZRX8 168 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms