RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 HECTD1Q9ULT8 2610 aa2.64□□□□□ -1.99
SYNE2-202ENST00000344113 LELP1Q5T871 98 aa2.64□□□□□ -1.99
SYNE2-202ENST00000344113 REG3GQ6UW15 175 aa2.64□□□□□ -1.99
SYNE2-202ENST00000344113 IGFL2Q6UWQ7 119 aa2.64□□□□□ -1.99
SYNE2-202ENST00000344113 GAS8-AS1O95177 125 aa2.63□□□□□ -1.99
SYNE2-202ENST00000344113 FAM229AH3BQW9 127 aa2.63□□□□□ -1.99
SYNE2-202ENST00000344113 RPL37AP61513 92 aaKnown RBP2.63□□□□□ -1.99
SYNE2-202ENST00000344113 CR1P17927 2039 aa2.63□□□□□ -1.99
SYNE2-202ENST00000344113 IGLV1-47P01700 117 aa2.63□□□□□ -1.99
SYNE2-202ENST00000344113 ZNF575Q86XF7 245 aa2.63□□□□□ -1.99
SYNE2-202ENST00000344113 LINC01558Q9Y6Z2 57 aa2.63□□□□□ -1.99
SYNE2-202ENST00000344113 MSMPQ1L6U9 139 aa2.63□□□□□ -1.99
SYNE2-202ENST00000344113 CNBPP62633 177 aaKnown RBP2.63□□□□□ -1.99
SYNE2-202ENST00000344113 C11orf45Q8TAV5 145 aa2.62□□□□□ -1.99
SYNE2-202ENST00000344113 IGHV4-61A0A0C4DH41 118 aa2.62□□□□□ -1.99
SYNE2-202ENST00000344113 FAM104AQ969W3 186 aa2.62□□□□□ -1.99
SYNE2-202ENST00000344113 PLA2G2AP14555 144 aa2.62□□□□□ -1.99
SYNE2-202ENST00000344113 CHD6Q8TD26 2715 aa2.62□□□□□ -1.99
SYNE2-202ENST00000344113 PINLYPA6NC86 204 aa2.62□□□□□ -1.99
SYNE2-202ENST00000344113 G3V318 75 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 STAB2Q8WWQ8 2551 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 CLPSL2Q6UWE3 100 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 COL4A2P08572 1712 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 GVQW2A0A096LPI5 108 aaPredicted RBP2.61□□□□□ -1.99
SYNE2-202ENST00000344113 OXTP01178 125 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 TRIOO75962 3097 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 IGLV5-37A0A075B6J1 123 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 ADAMTS20P59510 1910 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 LINC00315P59091 139 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 MGAM2Q2M2H8 2515 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 LINC00313P59037 77 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 PRO3102Q9H379 93 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 Q6ZRP5 223 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 Q8N9P0 234 aaPredicted RBP2.61□□□□□ -1.99
SYNE2-202ENST00000344113 NBEAL1Q6ZS30 2694 aa2.61□□□□□ -1.99
SYNE2-202ENST00000344113 RAI1Q7Z5J4 1906 aaPredicted RBP2.6□□□□□ -1.99
SYNE2-202ENST00000344113 A6NN06 94 aa2.6□□□□□ -1.99
SYNE2-202ENST00000344113 IGLV9-49A0A0B4J1Y8 123 aa2.6□□□□□ -1.99
SYNE2-202ENST00000344113 CYSRT1A8MQ03 144 aa2.6□□□□□ -1.99
SYNE2-202ENST00000344113 IGLV8-61A0A075B6I0 122 aa2.6□□□□□ -1.99
SYNE2-202ENST00000344113 LINC00337Q8N6G1 96 aa2.6□□□□□ -1.99
SYNE2-202ENST00000344113 CYSTM1Q9H1C7 97 aa2.6□□□□□ -1.99
SYNE2-202ENST00000344113 DNAH12Q6ZR08 3092 aa2.6□□□□□ -1.99
SYNE2-202ENST00000344113 ZCCHC13Q8WW36 166 aaKnown RBP2.6□□□□□ -1.99
SYNE2-202ENST00000344113 C1orf134Q5TEV5 83 aa2.6□□□□□ -1.99
SYNE2-202ENST00000344113 IGFL3Q6UXB1 125 aa2.6□□□□□ -1.99
SYNE2-202ENST00000344113 FRYLO94915 3013 aa2.6□□□□□ -1.99
SYNE2-202ENST00000344113 KLK12Q9UKR0 248 aa2.6□□□□□ -1.99
SYNE2-202ENST00000344113 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.59□□□□□ -1.99
SYNE2-202ENST00000344113 LRP4O75096 1905 aa2.59□□□□□ -1.99
SYNE2-202ENST00000344113 C8orf17Q9NRJ1 99 aa2.59□□□□□ -1.99
SYNE2-202ENST00000344113 COL4A3Q01955 1670 aa2.59□□□□□ -1.99
SYNE2-202ENST00000344113 STAB1Q9NY15 2570 aa2.59□□□□□ -1.99
SYNE2-202ENST00000344113 LINC00483Q53H64 154 aa2.59□□□□□ -1.99
SYNE2-202ENST00000344113 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.59□□□□□ -1.99
SYNE2-202ENST00000344113 CSNK1G2-AS1Q8NCQ2 148 aa2.59□□□□□ -1.99
SYNE2-202ENST00000344113 TNP2Q05952 138 aa2.59□□□□□ -2
SYNE2-202ENST00000344113 C16orf90A8MZG2 172 aa2.59□□□□□ -2
SYNE2-202ENST00000344113 PRUNE2Q8WUY3 3088 aa2.59□□□□□ -2
SYNE2-202ENST00000344113 ODF3BA8MYP8 253 aa2.59□□□□□ -2
SYNE2-202ENST00000344113 PRAC2D3DTV9 90 aa2.59□□□□□ -2
SYNE2-202ENST00000344113 Q8NAQ8 132 aa2.59□□□□□ -2
SYNE2-202ENST00000344113 ARRDC1-AS1Q9H2J1 176 aa2.59□□□□□ -2
SYNE2-202ENST00000344113 BAHCC1Q9P281 2608 aa2.59□□□□□ -2
SYNE2-202ENST00000344113 A0A0J9YWU9 116 aa2.59□□□□□ -2
SYNE2-202ENST00000344113 NUPR2A6NF83 97 aa2.59□□□□□ -2
SYNE2-202ENST00000344113 K7EQG2 157 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 DEFB116Q30KQ4 102 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 TLX1NBP0CAT3 122 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 Q5VV11 94 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 Q6ZRX8 168 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 IGLV5-48A0A075B6I7 105 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 A0A087WSZ3 146 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 FSHBP01225 129 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 IGHV4-30-4P0DP06 118 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 Q6ZTI0 123 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 TEP1Q99973 2627 aaKnown RBP2.58□□□□□ -2
SYNE2-202ENST00000344113 INAFM1C9JVW0 142 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 A8MTW9 85 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 IGLV6-57P01721 117 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 COX6B2Q6YFQ2 88 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 LINC01565O15544 149 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 Q8NA96 180 aa2.58□□□□□ -2
SYNE2-202ENST00000344113 DSPP15924 2871 aaKnown RBP2.58□□□□□ -2
SYNE2-202ENST00000344113 MAST4O15021 2626 aa2.57□□□□□ -2
SYNE2-202ENST00000344113 MRPL34Q9BQ48 92 aaKnown RBP2.57□□□□□ -2
SYNE2-202ENST00000344113 KIAA1549LQ6ZVL6 1849 aa2.57□□□□□ -2
SYNE2-202ENST00000344113 FAM215AQ9Y5M1 114 aa2.57□□□□□ -2
SYNE2-202ENST00000344113 CEP350Q5VT06 3117 aa2.57□□□□□ -2
SYNE2-202ENST00000344113 LYNX1P0DP58 116 aa2.57□□□□□ -2
SYNE2-202ENST00000344113 PRR26Q8N8Z3 221 aa2.57□□□□□ -2
SYNE2-202ENST00000344113 MGAMO43451 1857 aa2.57□□□□□ -2
SYNE2-202ENST00000344113 HELZ2Q9BYK8 2649 aaKnown RBP2.57□□□□□ -2
SYNE2-202ENST00000344113 UTP20O75691 2785 aaKnown RBP2.57□□□□□ -2
SYNE2-202ENST00000344113 ANKRD11Q6UB99 2663 aaPredicted RBP2.57□□□□□ -2
SYNE2-202ENST00000344113 ZNF503-AS2A6NEH8 195 aa2.56□□□□□ -2
SYNE2-202ENST00000344113 Q6YL49 198 aa2.56□□□□□ -2
SYNE2-202ENST00000344113 ATRQ13535 2644 aa2.56□□□□□ -2
SYNE2-202ENST00000344113 BBC3Q96PG8 261 aaPredicted RBP2.56□□□□□ -2
SYNE2-202ENST00000344113 KALRNO60229 2985 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms