RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 G3V318 75 aa5.06□□□□□ -1.6
ZNF540-202ENST00000343599 SPART-AS1P0CW21 52 aa5.06□□□□□ -1.6
ZNF540-202ENST00000343599 C14orf132Q9NPU4 83 aa5.06□□□□□ -1.6
ZNF540-202ENST00000343599 ROS1P08922 2347 aa5.05□□□□□ -1.6
ZNF540-202ENST00000343599 PKD1P98161 4303 aa5.05□□□□□ -1.6
ZNF540-202ENST00000343599 A0A0J9YXV3 536 aa5.05□□□□□ -1.6
ZNF540-202ENST00000343599 LINC00315P59091 139 aa5.05□□□□□ -1.6
ZNF540-202ENST00000343599 FAM229BQ4G0N7 80 aa5.05□□□□□ -1.6
ZNF540-202ENST00000343599 C9orf129Q5T035 196 aaKnown RBP5.05□□□□□ -1.6
ZNF540-202ENST00000343599 IGFL4Q6B9Z1 124 aa5.05□□□□□ -1.6
ZNF540-202ENST00000343599 KIF25-AS1Q9Y6Z4 181 aa5.05□□□□□ -1.6
ZNF540-202ENST00000343599 TRBV6-5A0A0K0K1A5 114 aa5.05□□□□□ -1.6
ZNF540-202ENST00000343599 MGPP08493 103 aa5.05□□□□□ -1.6
ZNF540-202ENST00000343599 APELAP0DMC3 54 aa5.05□□□□□ -1.6
ZNF540-202ENST00000343599 RNASE4P34096 147 aaKnown RBP5.05□□□□□ -1.6
ZNF540-202ENST00000343599 C15orf32Q32M92 178 aa5.05□□□□□ -1.6
ZNF540-202ENST00000343599 A0A0J9YWU9 116 aa5.04□□□□□ -1.6
ZNF540-202ENST00000343599 C6orf223Q8N319 242 aa5.04□□□□□ -1.6
ZNF540-202ENST00000343599 RMI2Q96E14 147 aa5.04□□□□□ -1.6
ZNF540-202ENST00000343599 C1orf134Q5TEV5 83 aa5.04□□□□□ -1.6
ZNF540-202ENST00000343599 C9orf47Q6ZRZ4 202 aa5.04□□□□□ -1.6
ZNF540-202ENST00000343599 LINC00308Q8TCZ7 52 aa5.04□□□□□ -1.6
ZNF540-202ENST00000343599 SOCS3O14543 225 aa5.03□□□□□ -1.6
ZNF540-202ENST00000343599 OPRPNQ99935 248 aaPredicted RBP5.03□□□□□ -1.6
ZNF540-202ENST00000343599 IGLV4-3A0A075B6K6 122 aa5.03□□□□□ -1.6
ZNF540-202ENST00000343599 MRPL55Q7Z7F7 128 aaKnown RBP5.03□□□□□ -1.6
ZNF540-202ENST00000343599 Q9HAA7 133 aa5.03□□□□□ -1.6
ZNF540-202ENST00000343599 NDUFA1O15239 70 aa5.03□□□□□ -1.6
ZNF540-202ENST00000343599 GIG44P09565 113 aaPredicted RBP5.03□□□□□ -1.6
ZNF540-202ENST00000343599 ECSCRQ19T08 205 aa5.03□□□□□ -1.6
ZNF540-202ENST00000343599 MPLKIPQ8TAP9 179 aa5.03□□□□□ -1.6
ZNF540-202ENST00000343599 ZNF625Q96I27 306 aaPredicted RBP5.03□□□□□ -1.6
ZNF540-202ENST00000343599 CTSGP08311 255 aa5.02□□□□□ -1.61
ZNF540-202ENST00000343599 ENHOQ6UWT2 76 aa5.02□□□□□ -1.61
ZNF540-202ENST00000343599 LENEPQ9Y5L5 61 aa5.02□□□□□ -1.61
ZNF540-202ENST00000343599 ESRGQ1W209 222 aa5.02□□□□□ -1.61
ZNF540-202ENST00000343599 DEFB136Q30KP8 78 aa5.02□□□□□ -1.61
ZNF540-202ENST00000343599 SUMO4Q6EEV6 95 aa5.02□□□□□ -1.61
ZNF540-202ENST00000343599 Q6ZSA8 131 aa5.02□□□□□ -1.61
ZNF540-202ENST00000343599 PHLDA3Q9Y5J5 127 aa5.02□□□□□ -1.61
ZNF540-202ENST00000343599 SNURFQ9Y675 71 aa5.02□□□□□ -1.61
ZNF540-202ENST00000343599 PRB2P02812 416 aaPredicted RBP5.01□□□□□ -1.61
ZNF540-202ENST00000343599 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.01□□□□□ -1.61
ZNF540-202ENST00000343599 C20orf203Q8NBC4 194 aa5.01□□□□□ -1.61
ZNF540-202ENST00000343599 NBDYA0A0U1RRE5 68 aa5.01□□□□□ -1.61
ZNF540-202ENST00000343599 F6UB75 175 aa5.01□□□□□ -1.61
ZNF540-202ENST00000343599 PRR9Q5T870 116 aa5.01□□□□□ -1.61
ZNF540-202ENST00000343599 FAM104AQ969W3 186 aa5.01□□□□□ -1.61
ZNF540-202ENST00000343599 C16orf74Q96GX8 76 aa5.01□□□□□ -1.61
ZNF540-202ENST00000343599 CHCHD7Q9BUK0 85 aa5.01□□□□□ -1.61
ZNF540-202ENST00000343599 TRBV7-4A0A0J9YYF1 115 aa5□□□□□ -1.61
ZNF540-202ENST00000343599 Q1T7F1 81 aa5□□□□□ -1.61
ZNF540-202ENST00000343599 RBM12B-AS1Q9P1G2 102 aa5□□□□□ -1.61
ZNF540-202ENST00000343599 SOSTDC1Q6X4U4 206 aa5□□□□□ -1.61
ZNF540-202ENST00000343599 ERC2-IT1O76042 136 aa4.99□□□□□ -1.61
ZNF540-202ENST00000343599 RNASE3P12724 160 aaKnown RBP4.99□□□□□ -1.61
ZNF540-202ENST00000343599 RYR1P21817 5038 aa4.99□□□□□ -1.61
ZNF540-202ENST00000343599 COL7A1Q02388 2944 aa4.99□□□□□ -1.61
ZNF540-202ENST00000343599 LY6G6CO95867 125 aa4.99□□□□□ -1.61
ZNF540-202ENST00000343599 Q6ZRN7 208 aaPredicted RBP4.99□□□□□ -1.61
ZNF540-202ENST00000343599 A0A087WYN8 130 aa4.98□□□□□ -1.61
ZNF540-202ENST00000343599 TRAV21A0A0B4J279 112 aa4.98□□□□□ -1.61
ZNF540-202ENST00000343599 NCR3O14931 201 aa4.98□□□□□ -1.61
ZNF540-202ENST00000343599 S100A4P26447 101 aaKnown RBP4.98□□□□□ -1.61
ZNF540-202ENST00000343599 DAD1P61803 113 aa4.98□□□□□ -1.61
ZNF540-202ENST00000343599 EPPK1P58107 5090 aaKnown RBP4.98□□□□□ -1.61
ZNF540-202ENST00000343599 H0YGX0 51 aa4.98□□□□□ -1.61
ZNF540-202ENST00000343599 KTN1-AS1Q86SY8 53 aa4.98□□□□□ -1.61
ZNF540-202ENST00000343599 ZFAND2AQ8N6M9 145 aa4.98□□□□□ -1.61
ZNF540-202ENST00000343599 DEFB104AQ8WTQ1 72 aa4.98□□□□□ -1.61
ZNF540-202ENST00000343599 IGHV3-72A0A0B4J1Y9 119 aa4.97□□□□□ -1.61
ZNF540-202ENST00000343599 IGHV4-28A0A0C4DH34 117 aa4.97□□□□□ -1.61
ZNF540-202ENST00000343599 IGLV5-45A0A087WSX0 123 aa4.97□□□□□ -1.61
ZNF540-202ENST00000343599 Q6ZTC4 211 aa4.97□□□□□ -1.61
ZNF540-202ENST00000343599 MIR7-3HGQ8N6C7 128 aa4.97□□□□□ -1.61
ZNF540-202ENST00000343599 UNQ9165/PRO28630Q6UXU0 137 aa4.96□□□□□ -1.61
ZNF540-202ENST00000343599 RHPN1-AS1Q9BWJ2 59 aa4.96□□□□□ -1.61
ZNF540-202ENST00000343599 UBL5Q9BZL1 73 aa4.96□□□□□ -1.61
ZNF540-202ENST00000343599 JMJD7-PLA2G4BH0Y9G9 81 aa4.96□□□□□ -1.62
ZNF540-202ENST00000343599 M0QY20 66 aa4.96□□□□□ -1.62
ZNF540-202ENST00000343599 IGKV2-29A2NJV5 120 aaPredicted RBP4.95□□□□□ -1.62
ZNF540-202ENST00000343599 ORMDL1Q9P0S3 153 aa4.95□□□□□ -1.62
ZNF540-202ENST00000343599 S4R3C0 116 aa4.95□□□□□ -1.62
ZNF540-202ENST00000343599 DEFB131BA0A096LNP1 70 aa4.95□□□□□ -1.62
ZNF540-202ENST00000343599 LINC00167Q96N53 147 aa4.95□□□□□ -1.62
ZNF540-202ENST00000343599 MUC4Q99102 2169 aa4.95□□□□□ -1.62
ZNF540-202ENST00000343599 IGLV5-39A0A0G2JS06 123 aa4.95□□□□□ -1.62
ZNF540-202ENST00000343599 GNRH2O43555 120 aa4.95□□□□□ -1.62
ZNF540-202ENST00000343599 DNAH10OSP0CZ25 163 aa4.95□□□□□ -1.62
ZNF540-202ENST00000343599 C11orf72Q8NBR9 251 aa4.95□□□□□ -1.62
ZNF540-202ENST00000343599 A0A087WZ39 114 aa4.94□□□□□ -1.62
ZNF540-202ENST00000343599 Q6ZRP5 223 aa4.94□□□□□ -1.62
ZNF540-202ENST00000343599 TMEM254Q8TBM7 123 aa4.94□□□□□ -1.62
ZNF540-202ENST00000343599 LINC00588Q9Y4M8 146 aa4.94□□□□□ -1.62
ZNF540-202ENST00000343599 CSMD3Q7Z407 3707 aa4.93□□□□□ -1.62
ZNF540-202ENST00000343599 IGHV1OR15-1A0A075B7D0 117 aa4.93□□□□□ -1.62
ZNF540-202ENST00000343599 hDV103S1A0JD37 113 aa4.93□□□□□ -1.62
ZNF540-202ENST00000343599 CCL18P55774 89 aa4.93□□□□□ -1.62
ZNF540-202ENST00000343599 CXCL6P80162 114 aa4.93□□□□□ -1.62
ZNF540-202ENST00000343599 SMIM11BQ8TCY0 68 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms