RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 S100A6P06703 90 aa11.04□□□□□ -0.64
USF2-202ENST00000343550 LBHQ53QV2 105 aaPredicted RBP11.04□□□□□ -0.64
USF2-202ENST00000343550 SND1-IT1Q9HBX3 110 aa11.04□□□□□ -0.64
USF2-202ENST00000343550 TP73-AS1Q9UF72 201 aa11.04□□□□□ -0.64
USF2-202ENST00000343550 LEPROTO15243 131 aa11.03□□□□□ -0.64
USF2-202ENST00000343550 MRPL55Q7Z7F7 128 aaKnown RBP11.02□□□□□ -0.65
USF2-202ENST00000343550 NDUFA12Q9UI09 145 aa11.02□□□□□ -0.65
USF2-202ENST00000343550 LINC00158P58513 81 aa11.01□□□□□ -0.65
USF2-202ENST00000343550 HERV-K104P63124 156 aa11.01□□□□□ -0.65
USF2-202ENST00000343550 REG3GQ6UW15 175 aa11.01□□□□□ -0.65
USF2-202ENST00000343550 PLEKHB2Q96CS7 222 aa11.01□□□□□ -0.65
USF2-202ENST00000343550 IGLV5-37A0A075B6J1 123 aa11□□□□□ -0.65
USF2-202ENST00000343550 C5orf52A6NGY3 159 aa11□□□□□ -0.65
USF2-202ENST00000343550 IGLV7-43P04211 117 aa11□□□□□ -0.65
USF2-202ENST00000343550 TSPEAR-AS2P59090 65 aa11□□□□□ -0.65
USF2-202ENST00000343550 LINC01545Q5VT33 79 aa11□□□□□ -0.65
USF2-202ENST00000343550 PET117Q6UWS5 81 aa11□□□□□ -0.65
USF2-202ENST00000343550 A0A0U1RRA0 63 aa10.99□□□□□ -0.65
USF2-202ENST00000343550 MYMXA0A1B0GTQ4 84 aa10.99□□□□□ -0.65
USF2-202ENST00000343550 C3orf79P0CE67 100 aa10.99□□□□□ -0.65
USF2-202ENST00000343550 KRTAP10-8P60410 259 aa10.99□□□□□ -0.65
USF2-202ENST00000343550 HERVK_113P61574 105 aa10.99□□□□□ -0.65
USF2-202ENST00000343550 LINC00167Q96N53 147 aa10.99□□□□□ -0.65
USF2-202ENST00000343550 J3QQQ9 107 aa10.99□□□□□ -0.65
USF2-202ENST00000343550 SMIM13P0DJ93 91 aa10.99□□□□□ -0.65
USF2-202ENST00000343550 SNRPEP62304 92 aaKnown RBP10.99□□□□□ -0.65
USF2-202ENST00000343550 LINC00587B1AMM8 73 aa10.97□□□□□ -0.65
USF2-202ENST00000343550 MEIG1Q5JSS6 88 aa10.97□□□□□ -0.65
USF2-202ENST00000343550 NKAPP1Q8N9T2 125 aa10.97□□□□□ -0.65
USF2-202ENST00000343550 RPL37AP8A6NKH3 93 aa10.96□□□□□ -0.65
USF2-202ENST00000343550 VPREB1P12018 145 aa10.96□□□□□ -0.65
USF2-202ENST00000343550 GAGE10A6NGK3 116 aa10.95□□□□□ -0.66
USF2-202ENST00000343550 KRTDAPP60985 99 aa10.95□□□□□ -0.66
USF2-202ENST00000343550 RPL24P83731 157 aaKnown RBP10.95□□□□□ -0.66
USF2-202ENST00000343550 Q8NDZ9 215 aa10.95□□□□□ -0.66
USF2-202ENST00000343550 LRP2P98164 4655 aa10.94□□□□□ -0.66
USF2-202ENST00000343550 E9PLD3 99 aa10.94□□□□□ -0.66
USF2-202ENST00000343550 LGALS3P17931 250 aaKnown RBP10.94□□□□□ -0.66
USF2-202ENST00000343550 NMUP48645 174 aa10.94□□□□□ -0.66
USF2-202ENST00000343550 MIR7-3HGQ8N6C7 128 aa10.94□□□□□ -0.66
USF2-202ENST00000343550 DIRC1Q969H9 104 aa10.91□□□□□ -0.66
USF2-202ENST00000343550 IGLV1-50A0A075B6I6 118 aa10.9□□□□□ -0.66
USF2-202ENST00000343550 HIST3H2BBQ8N257 126 aa10.9□□□□□ -0.66
USF2-202ENST00000343550 ZNF861PO60384 105 aa10.89□□□□□ -0.67
USF2-202ENST00000343550 IGKV2-28A0A075B6P5 120 aa10.89□□□□□ -0.67
USF2-202ENST00000343550 H0Y9J4 135 aa10.89□□□□□ -0.67
USF2-202ENST00000343550 BCE1O60756 84 aa10.89□□□□□ -0.67
USF2-202ENST00000343550 IGKV2D-28P01615 120 aa10.89□□□□□ -0.67
USF2-202ENST00000343550 AKR1D1P51857 326 aa10.89□□□□□ -0.67
USF2-202ENST00000343550 BOD1L2Q8IYS8 172 aa10.89□□□□□ -0.67
USF2-202ENST00000343550 LOC107984156A0A0G2JMH3 177 aa10.88□□□□□ -0.67
USF2-202ENST00000343550 ARL17AQ8IVW1 177 aa10.88□□□□□ -0.67
USF2-202ENST00000343550 DAND5Q8N907 189 aa10.88□□□□□ -0.67
USF2-202ENST00000343550 A0A0J9YXY3 114 aa10.87□□□□□ -0.67
USF2-202ENST00000343550 C20orf202A1L168 122 aa10.87□□□□□ -0.67
USF2-202ENST00000343550 HIST1H2BLQ99880 126 aa10.87□□□□□ -0.67
USF2-202ENST00000343550 IGKV2D-26A0A0A0MRZ7 120 aa10.86□□□□□ -0.67
USF2-202ENST00000343550 M0R378 163 aa10.86□□□□□ -0.67
USF2-202ENST00000343550 S100A2P29034 98 aa10.86□□□□□ -0.67
USF2-202ENST00000343550 RNF213Q63HN8 5207 aa10.86□□□□□ -0.67
USF2-202ENST00000343550 ADAMTSL4-AS1Q5T5F5 129 aa10.84□□□□□ -0.67
USF2-202ENST00000343550 RPL28P46779 137 aaKnown RBP10.84□□□□□ -0.67
USF2-202ENST00000343550 LINC00518Q8N0U6 118 aa10.84□□□□□ -0.67
USF2-202ENST00000343550 TMEM238C9JI98 176 aa10.83□□□□□ -0.68
USF2-202ENST00000343550 ATOH7Q8N100 152 aa10.83□□□□□ -0.68
USF2-202ENST00000343550 TMEM126AQ9H061 195 aa10.83□□□□□ -0.68
USF2-202ENST00000343550 SMIM6P0DI80 62 aa10.82□□□□□ -0.68
USF2-202ENST00000343550 TTTY13Q9BZ97 58 aa10.82□□□□□ -0.68
USF2-202ENST00000343550 KRTAP1-4P0C5Y4 121 aa10.81□□□□□ -0.68
USF2-202ENST00000343550 KRTAP13-1Q8IUC0 172 aa10.81□□□□□ -0.68
USF2-202ENST00000343550 ZNF815PA8K554 130 aa10.8□□□□□ -0.68
USF2-202ENST00000343550 NCR3O14931 201 aa10.8□□□□□ -0.68
USF2-202ENST00000343550 ANKRD39Q53RE8 183 aa10.8□□□□□ -0.68
USF2-202ENST00000343550 LITAFQ99732 161 aa10.8□□□□□ -0.68
USF2-202ENST00000343550 EIF4EBP3O60516 100 aaPredicted RBP10.79□□□□□ -0.68
USF2-202ENST00000343550 UBE2AP49459 152 aa10.79□□□□□ -0.68
USF2-202ENST00000343550 MIEN1Q9BRT3 115 aa10.79□□□□□ -0.68
USF2-202ENST00000343550 SOSTDC1Q6X4U4 206 aa10.79□□□□□ -0.68
USF2-202ENST00000343550 TIMM17BO60830 172 aa10.78□□□□□ -0.68
USF2-202ENST00000343550 FAM19A1Q7Z5A9 133 aa10.78□□□□□ -0.68
USF2-202ENST00000343550 NDUFC2O95298 119 aa10.77□□□□□ -0.69
USF2-202ENST00000343550 NPC2P61916 151 aa10.77□□□□□ -0.69
USF2-202ENST00000343550 PRR26Q8N8Z3 221 aa10.77□□□□□ -0.69
USF2-202ENST00000343550 C12orf57Q99622 126 aa10.77□□□□□ -0.69
USF2-202ENST00000343550 TRBV10-2A0A0K0K1G8 114 aa10.76□□□□□ -0.69
USF2-202ENST00000343550 PRLHP81277 87 aa10.76□□□□□ -0.69
USF2-202ENST00000343550 KCNQ1DNQ9H478 68 aa10.76□□□□□ -0.69
USF2-202ENST00000343550 TRBV10-3A0A0K0K1G6 114 aa10.75□□□□□ -0.69
USF2-202ENST00000343550 LINC00308Q8TCZ7 52 aa10.74□□□□□ -0.69
USF2-202ENST00000343550 SPANXB1Q9NS25 103 aaPredicted RBP10.74□□□□□ -0.69
USF2-202ENST00000343550 PRYO14603 147 aa10.74□□□□□ -0.69
USF2-202ENST00000343550 SPRR1AP35321 89 aa10.73□□□□□ -0.69
USF2-202ENST00000343550 PCP2Q8IVA1 136 aa10.73□□□□□ -0.69
USF2-202ENST00000343550 DDTP30046 118 aa10.72□□□□□ -0.69
USF2-202ENST00000343550 PYY3Q5JQD4 70 aa10.71□□□□□ -0.69
USF2-202ENST00000343550 SCGB1D4Q6XE38 83 aa10.71□□□□□ -0.69
USF2-202ENST00000343550 LINC00337Q8N6G1 96 aa10.71□□□□□ -0.69
USF2-202ENST00000343550 KRTAP4-16G5E9R7 235 aaPredicted RBP10.7□□□□□ -0.7
USF2-202ENST00000343550 JOSD1Q15040 202 aaPredicted RBP10.7□□□□□ -0.7
USF2-202ENST00000343550 IGLV6-57P01721 117 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms