RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 C4orf48Q5BLP8 95 aa3.29□□□□□ -1.88
CSMD3-203ENST00000343508 KIAA0087Q14695 138 aa3.29□□□□□ -1.88
CSMD3-203ENST00000343508 A0A096LNI7 61 aa3.28□□□□□ -1.88
CSMD3-203ENST00000343508 FRYQ5TBA9 3013 aa3.28□□□□□ -1.88
CSMD3-203ENST00000343508 OBSCN-AS1Q96MR7 158 aa3.28□□□□□ -1.88
CSMD3-203ENST00000343508 TP53AIP1Q9HCN2 124 aa3.28□□□□□ -1.88
CSMD3-203ENST00000343508 NOTCH3Q9UM47 2321 aa3.27□□□□□ -1.89
CSMD3-203ENST00000343508 PLA2G2AP14555 144 aa3.27□□□□□ -1.89
CSMD3-203ENST00000343508 C6orf48Q9UBA6 75 aa3.27□□□□□ -1.89
CSMD3-203ENST00000343508 RETNQ9HD89 108 aa3.27□□□□□ -1.89
CSMD3-203ENST00000343508 A0A087WSZ3 146 aa3.27□□□□□ -1.89
CSMD3-203ENST00000343508 LAMA5O15230 3695 aa3.27□□□□□ -1.89
CSMD3-203ENST00000343508 MUC3AQ02505 3323 aa3.27□□□□□ -1.89
CSMD3-203ENST00000343508 LINC00336Q6ZUF6 198 aa3.27□□□□□ -1.89
CSMD3-203ENST00000343508 Q9BRP9 147 aa3.27□□□□□ -1.89
CSMD3-203ENST00000343508 Q6ZRX8 168 aa3.26□□□□□ -1.89
CSMD3-203ENST00000343508 TRBV7-4A0A0J9YYF1 115 aa3.26□□□□□ -1.89
CSMD3-203ENST00000343508 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-203ENST00000343508 C1orf64Q8NEQ6 169 aa3.26□□□□□ -1.89
CSMD3-203ENST00000343508 OTOGLQ3ZCN5 2332 aa3.26□□□□□ -1.89
CSMD3-203ENST00000343508 RIF1Q5UIP0 2472 aaKnown RBP3.26□□□□□ -1.89
CSMD3-203ENST00000343508 DEFB116Q30KQ4 102 aa3.26□□□□□ -1.89
CSMD3-203ENST00000343508 Q8NBF4 154 aa3.26□□□□□ -1.89
CSMD3-203ENST00000343508 GVINP1Q7Z2Y8 2422 aa3.25□□□□□ -1.89
CSMD3-203ENST00000343508 K7ERS5 55 aa3.25□□□□□ -1.89
CSMD3-203ENST00000343508 CYP4F30PQ9H0H9 118 aa3.25□□□□□ -1.89
CSMD3-203ENST00000343508 NANOS2P60321 138 aaKnown RBP3.25□□□□□ -1.89
CSMD3-203ENST00000343508 Q6ZTC4 211 aa3.25□□□□□ -1.89
CSMD3-203ENST00000343508 C22orf24Q9Y442 160 aa3.25□□□□□ -1.89
CSMD3-203ENST00000343508 LINC01556Q5JQF7 62 aa3.25□□□□□ -1.89
CSMD3-203ENST00000343508 CSNK1G2-AS1Q8NCQ2 148 aa3.25□□□□□ -1.89
CSMD3-203ENST00000343508 SPENQ96T58 3664 aaKnown RBP3.25□□□□□ -1.89
CSMD3-203ENST00000343508 IGLV9-49A0A0B4J1Y8 123 aa3.25□□□□□ -1.89
CSMD3-203ENST00000343508 C9orf129Q5T035 196 aaKnown RBP3.25□□□□□ -1.89
CSMD3-203ENST00000343508 INAFM1C9JVW0 142 aa3.24□□□□□ -1.89
CSMD3-203ENST00000343508 TRAV22A0A0B4J277 110 aa3.24□□□□□ -1.89
CSMD3-203ENST00000343508 NBASA2RRP1 2371 aa3.24□□□□□ -1.89
CSMD3-203ENST00000343508 CFAP47Q6ZTR5 3102 aa3.24□□□□□ -1.89
CSMD3-203ENST00000343508 PRR15Q8IV56 129 aa3.24□□□□□ -1.89
CSMD3-203ENST00000343508 LINC00476Q8WZB0 136 aa3.24□□□□□ -1.89
CSMD3-203ENST00000343508 PTPRQQ9UMZ3 2332 aa3.24□□□□□ -1.89
CSMD3-203ENST00000343508 VPREB1P12018 145 aa3.24□□□□□ -1.89
CSMD3-203ENST00000343508 Q6ZRP5 223 aa3.23□□□□□ -1.89
CSMD3-203ENST00000343508 SMG1Q96Q15 3661 aaKnown RBP3.23□□□□□ -1.89
CSMD3-203ENST00000343508 C7orf33Q8WU49 177 aa3.23□□□□□ -1.89
CSMD3-203ENST00000343508 K7EQZ3 153 aa3.23□□□□□ -1.89
CSMD3-203ENST00000343508 X6R8D5 127 aa3.23□□□□□ -1.89
CSMD3-203ENST00000343508 IGHV6-1A0A0B4J1U7 121 aa3.22□□□□□ -1.89
CSMD3-203ENST00000343508 LINC00528Q8N1L1 170 aa3.22□□□□□ -1.89
CSMD3-203ENST00000343508 ACYP2P14621 99 aa3.22□□□□□ -1.89
CSMD3-203ENST00000343508 KCNQ1DNQ9H478 68 aa3.22□□□□□ -1.89
CSMD3-203ENST00000343508 CSPG4Q6UVK1 2322 aa3.22□□□□□ -1.89
CSMD3-203ENST00000343508 FAM104AQ969W3 186 aa3.22□□□□□ -1.89
CSMD3-203ENST00000343508 PRR34Q9NV39 138 aa3.22□□□□□ -1.89
CSMD3-203ENST00000343508 ZZEF1O43149 2961 aa3.22□□□□□ -1.89
CSMD3-203ENST00000343508 PRRC2CQ9Y520 2896 aaKnown RBP3.22□□□□□ -1.89
CSMD3-203ENST00000343508 FSHBP01225 129 aa3.22□□□□□ -1.89
CSMD3-203ENST00000343508 CD164Q04900 197 aa3.22□□□□□ -1.89
CSMD3-203ENST00000343508 Q1T7F1 81 aa3.22□□□□□ -1.89
CSMD3-203ENST00000343508 PIEZO2Q9H5I5 2752 aa3.21□□□□□ -1.9
CSMD3-203ENST00000343508 BOD1L1Q8NFC6 3051 aa3.21□□□□□ -1.9
CSMD3-203ENST00000343508 PCOTHQ58A44 107 aa3.21□□□□□ -1.9
CSMD3-203ENST00000343508 SPINK6Q6UWN8 80 aa3.21□□□□□ -1.9
CSMD3-203ENST00000343508 PRLHP81277 87 aa3.21□□□□□ -1.9
CSMD3-203ENST00000343508 SPAG11AQ6PDA7 123 aa3.21□□□□□ -1.9
CSMD3-203ENST00000343508 SVEP1Q4LDE5 3571 aa3.21□□□□□ -1.9
CSMD3-203ENST00000343508 Q8NAQ8 132 aa3.21□□□□□ -1.9
CSMD3-203ENST00000343508 Q8N377 158 aa3.21□□□□□ -1.9
CSMD3-203ENST00000343508 A8MWP4 228 aa3.2□□□□□ -1.9
CSMD3-203ENST00000343508 Q5XG85 94 aa3.2□□□□□ -1.9
CSMD3-203ENST00000343508 ZFHX3Q15911 3703 aa3.2□□□□□ -1.9
CSMD3-203ENST00000343508 A0A1B0GU69 56 aa3.2□□□□□ -1.9
CSMD3-203ENST00000343508 SPANXA2-OT1Q8N9U9 137 aa3.2□□□□□ -1.9
CSMD3-203ENST00000343508 ZFHX2Q9C0A1 2572 aaPredicted RBP3.2□□□□□ -1.9
CSMD3-203ENST00000343508 C16orf90A8MZG2 172 aa3.2□□□□□ -1.9
CSMD3-203ENST00000343508 MOBPQ13875 183 aa3.2□□□□□ -1.9
CSMD3-203ENST00000343508 OXLD1Q5BKU9 147 aa3.2□□□□□ -1.9
CSMD3-203ENST00000343508 CREBBPQ92793 2442 aa3.2□□□□□ -1.9
CSMD3-203ENST00000343508 ATP11AUNQ6ZP68 121 aa3.19□□□□□ -1.9
CSMD3-203ENST00000343508 KRTAP10-9P60411 292 aa3.19□□□□□ -1.9
CSMD3-203ENST00000343508 KTN1-AS1Q86SY8 53 aa3.19□□□□□ -1.9
CSMD3-203ENST00000343508 IGLV5-48A0A075B6I7 105 aa3.19□□□□□ -1.9
CSMD3-203ENST00000343508 IGLV1-50A0A075B6I6 118 aa3.19□□□□□ -1.9
CSMD3-203ENST00000343508 PLA2G2DQ9UNK4 145 aa3.19□□□□□ -1.9
CSMD3-203ENST00000343508 OCR1Q9BZK8 76 aa3.19□□□□□ -1.9
CSMD3-203ENST00000343508 LINC00612Q8N6U2 182 aa3.18□□□□□ -1.9
CSMD3-203ENST00000343508 A8MUN3 132 aa3.18□□□□□ -1.9
CSMD3-203ENST00000343508 COA5Q86WW8 74 aa3.18□□□□□ -1.9
CSMD3-203ENST00000343508 CIRBP-AS1Q8TBR5 109 aa3.18□□□□□ -1.9
CSMD3-203ENST00000343508 C8orf87E5RJ46 101 aa3.18□□□□□ -1.9
CSMD3-203ENST00000343508 GIG44P09565 113 aaPredicted RBP3.18□□□□□ -1.9
CSMD3-203ENST00000343508 TLX1NBP0CAT3 122 aa3.18□□□□□ -1.9
CSMD3-203ENST00000343508 NUPR2A6NF83 97 aa3.17□□□□□ -1.9
CSMD3-203ENST00000343508 DNAH10OSP0CZ25 163 aa3.17□□□□□ -1.9
CSMD3-203ENST00000343508 ADGRG4Q8IZF6 3080 aa3.17□□□□□ -1.9
CSMD3-203ENST00000343508 LOC101927531A0A1B0GV80 90 aa3.17□□□□□ -1.9
CSMD3-203ENST00000343508 ST20-AS1Q8NBB2 130 aa3.17□□□□□ -1.9
CSMD3-203ENST00000343508 RPL37AP61513 92 aaKnown RBP3.17□□□□□ -1.9
CSMD3-203ENST00000343508 SMR3AQ99954 134 aa3.17□□□□□ -1.9
CSMD3-203ENST00000343508 EPM2AB3EWF7 344 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms