RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 BAALC-AS2P0C853 105 aa9.06□□□□□ -0.96
COL18A1-201ENST00000342220 LINC00308Q8TCZ7 52 aa9.06□□□□□ -0.96
COL18A1-201ENST00000342220 Q9HAA7 133 aa9.06□□□□□ -0.96
COL18A1-201ENST00000342220 IGLV5-39A0A0G2JS06 123 aa9.05□□□□□ -0.96
COL18A1-201ENST00000342220 USP17L23D6RBM5 183 aa9.05□□□□□ -0.96
COL18A1-201ENST00000342220 KPRPQ5T749 579 aaPredicted RBP9.05□□□□□ -0.96
COL18A1-201ENST00000342220 SMIM1B2RUZ4 78 aa9.04□□□□□ -0.96
COL18A1-201ENST00000342220 SOSTDC1Q6X4U4 206 aa9.04□□□□□ -0.96
COL18A1-201ENST00000342220 DNAL4O96015 105 aa9.03□□□□□ -0.96
COL18A1-201ENST00000342220 ANK2Q01484 3957 aa9.03□□□□□ -0.96
COL18A1-201ENST00000342220 CDC42SE2Q9NRR3 84 aa9.02□□□□□ -0.97
COL18A1-201ENST00000342220 BRK1Q8WUW1 75 aa9.01□□□□□ -0.97
COL18A1-201ENST00000342220 INAFM2P0DMQ5 153 aa9.01□□□□□ -0.97
COL18A1-201ENST00000342220 C1orf195Q5TG92 126 aa9.01□□□□□ -0.97
COL18A1-201ENST00000342220 C20orf197Q8N268 126 aa9□□□□□ -0.97
COL18A1-201ENST00000342220 COX7A2LO14548 114 aa8.99□□□□□ -0.97
COL18A1-201ENST00000342220 FAM19A3Q7Z5A8 133 aa8.99□□□□□ -0.97
COL18A1-201ENST00000342220 LINC01561Q8N1V8 128 aa8.99□□□□□ -0.97
COL18A1-201ENST00000342220 EGFEM1PQ0D2K5 195 aa8.99□□□□□ -0.97
COL18A1-201ENST00000342220 WFDC10BQ8IUB3 73 aa8.99□□□□□ -0.97
COL18A1-201ENST00000342220 C6orf226Q5I0X4 101 aa8.99□□□□□ -0.97
COL18A1-201ENST00000342220 CRPP02741 224 aa8.98□□□□□ -0.97
COL18A1-201ENST00000342220 C14orf132Q9NPU4 83 aa8.98□□□□□ -0.97
COL18A1-201ENST00000342220 GHRHP01286 108 aa8.97□□□□□ -0.97
COL18A1-201ENST00000342220 SS18Q15532 418 aa8.97□□□□□ -0.97
COL18A1-201ENST00000342220 TRAV23DV6A0A075B6W5 121 aa8.96□□□□□ -0.97
COL18A1-201ENST00000342220 LINC00158P58513 81 aa8.96□□□□□ -0.97
COL18A1-201ENST00000342220 REG3AQ06141 175 aa8.96□□□□□ -0.97
COL18A1-201ENST00000342220 LINC00846Q9NV44 126 aa8.96□□□□□ -0.97
COL18A1-201ENST00000342220 NDUFC2O95298 119 aa8.96□□□□□ -0.98
COL18A1-201ENST00000342220 IGKV2D-24A0A075B6R9 120 aa8.95□□□□□ -0.98
COL18A1-201ENST00000342220 FAM218AQ96MZ4 157 aa8.95□□□□□ -0.98
COL18A1-201ENST00000342220 LINC00959A0A1B0GUT2 108 aa8.94□□□□□ -0.98
COL18A1-201ENST00000342220 LECT2O14960 151 aa8.94□□□□□ -0.98
COL18A1-201ENST00000342220 Q6JHZ5 121 aa8.94□□□□□ -0.98
COL18A1-201ENST00000342220 COPS9Q8WXC6 57 aa8.94□□□□□ -0.98
COL18A1-201ENST00000342220 C22orf24Q9Y442 160 aa8.94□□□□□ -0.98
COL18A1-201ENST00000342220 SERP1Q9Y6X1 66 aa8.94□□□□□ -0.98
COL18A1-201ENST00000342220 HIGD2BQ4VC39 106 aa8.93□□□□□ -0.98
COL18A1-201ENST00000342220 LYPD5Q6UWN5 251 aa8.93□□□□□ -0.98
COL18A1-201ENST00000342220 ESRGQ1W209 222 aa8.93□□□□□ -0.98
COL18A1-201ENST00000342220 CHCHD10Q8WYQ3 142 aaPredicted RBP8.93□□□□□ -0.98
COL18A1-201ENST00000342220 C9orf129Q5T035 196 aaKnown RBP8.92□□□□□ -0.98
COL18A1-201ENST00000342220 COX7B2Q8TF08 81 aa8.92□□□□□ -0.98
COL18A1-201ENST00000342220 UBE2DNLQ8IWF7 75 aa8.92□□□□□ -0.98
COL18A1-201ENST00000342220 MIR7-3HGQ8N6C7 128 aa8.92□□□□□ -0.98
COL18A1-201ENST00000342220 LINC00612Q8N6U2 182 aa8.92□□□□□ -0.98
COL18A1-201ENST00000342220 CMYA5Q8N3K9 4069 aa8.91□□□□□ -0.98
COL18A1-201ENST00000342220 NDUFC2-KCTD14E9PQ53 114 aa8.91□□□□□ -0.98
COL18A1-201ENST00000342220 DNHD1Q96M86 4753 aa8.91□□□□□ -0.98
COL18A1-201ENST00000342220 COL7A1Q02388 2944 aa8.91□□□□□ -0.98
COL18A1-201ENST00000342220 C9orf116Q5BN46 136 aaPredicted RBP8.9□□□□□ -0.98
COL18A1-201ENST00000342220 LINC00474Q9P2X8 69 aa8.9□□□□□ -0.98
COL18A1-201ENST00000342220 FP248Q71RG6 208 aaPredicted RBP8.9□□□□□ -0.98
COL18A1-201ENST00000342220 LINC00337Q8N6G1 96 aa8.9□□□□□ -0.98
COL18A1-201ENST00000342220 RPL28P46779 137 aaKnown RBP8.9□□□□□ -0.99
COL18A1-201ENST00000342220 SMIM26A0A096LP01 95 aa8.89□□□□□ -0.99
COL18A1-201ENST00000342220 LELP1Q5T871 98 aa8.89□□□□□ -0.99
COL18A1-201ENST00000342220 SND1-IT1Q9HBX3 110 aa8.89□□□□□ -0.99
COL18A1-201ENST00000342220 IGKV2-28A0A075B6P5 120 aa8.89□□□□□ -0.99
COL18A1-201ENST00000342220 IGKV2D-28P01615 120 aa8.89□□□□□ -0.99
COL18A1-201ENST00000342220 C6orf223Q8N319 242 aa8.89□□□□□ -0.99
COL18A1-201ENST00000342220 RBM3P98179 157 aaKnown RBP8.88□□□□□ -0.99
COL18A1-201ENST00000342220 TRAV13-2A0A0B4J235 113 aa8.87□□□□□ -0.99
COL18A1-201ENST00000342220 IGHV3OR16-9A0A0B4J2B5 98 aa8.87□□□□□ -0.99
COL18A1-201ENST00000342220 FAM19A1Q7Z5A9 133 aa8.87□□□□□ -0.99
COL18A1-201ENST00000342220 DNAH3Q8TD57 4116 aa8.87□□□□□ -0.99
COL18A1-201ENST00000342220 NCR3O14931 201 aa8.87□□□□□ -0.99
COL18A1-201ENST00000342220 SNURFQ9Y675 71 aa8.87□□□□□ -0.99
COL18A1-201ENST00000342220 TRAV10A0A0B4J240 114 aa8.86□□□□□ -0.99
COL18A1-201ENST00000342220 CCL18P55774 89 aa8.86□□□□□ -0.99
COL18A1-201ENST00000342220 M0R2N4 97 aa8.86□□□□□ -0.99
COL18A1-201ENST00000342220 H7BZZ5 65 aa8.85□□□□□ -0.99
COL18A1-201ENST00000342220 ENHOQ6UWT2 76 aa8.85□□□□□ -0.99
COL18A1-201ENST00000342220 SMIM11BQ8TCY0 68 aa8.85□□□□□ -0.99
COL18A1-201ENST00000342220 MPLKIPQ8TAP9 179 aa8.85□□□□□ -0.99
COL18A1-201ENST00000342220 A0A087WYN8 130 aa8.84□□□□□ -0.99
COL18A1-201ENST00000342220 A0A087WZ39 114 aa8.84□□□□□ -0.99
COL18A1-201ENST00000342220 SPAG11BQ08648 103 aa8.83□□□□□ -1
COL18A1-201ENST00000342220 TM2D3Q9BRN9 247 aa8.83□□□□□ -1
COL18A1-201ENST00000342220 EPM2AB3EWF7 344 aa8.82□□□□□ -1
COL18A1-201ENST00000342220 ZNF561-AS1K7EIQ3 104 aa8.82□□□□□ -1
COL18A1-201ENST00000342220 RMI2Q96E14 147 aa8.82□□□□□ -1
COL18A1-201ENST00000342220 CSMD3Q7Z407 3707 aa8.82□□□□□ -1
COL18A1-201ENST00000342220 MEGF8Q7Z7M0 2845 aa8.82□□□□□ -1
COL18A1-201ENST00000342220 PRR3P79522 188 aaKnown RBP8.82□□□□□ -1
COL18A1-201ENST00000342220 IBA57-AS1B1ANH7 110 aa8.82□□□□□ -1
COL18A1-201ENST00000342220 F8WEM9 126 aa8.82□□□□□ -1
COL18A1-201ENST00000342220 UNQ6190/PRO20217Q6UXQ8 127 aa8.82□□□□□ -1
COL18A1-201ENST00000342220 XAGE1AQ9HD64 81 aa8.82□□□□□ -1
COL18A1-201ENST00000342220 SLPIP03973 132 aa8.81□□□□□ -1
COL18A1-201ENST00000342220 TRBV7-6A0A0J9YX20 115 aa8.81□□□□□ -1
COL18A1-201ENST00000342220 A0A1B0GUV1 79 aa8.8□□□□□ -1
COL18A1-201ENST00000342220 CD164L2Q6UWJ8 174 aa8.8□□□□□ -1
COL18A1-201ENST00000342220 LINC00588Q9Y4M8 146 aa8.8□□□□□ -1
COL18A1-201ENST00000342220 PSCAO43653 123 aa8.79□□□□□ -1
COL18A1-201ENST00000342220 C10orf25Q5T742 122 aa8.79□□□□□ -1
COL18A1-201ENST00000342220 CCKP06307 115 aa8.79□□□□□ -1
COL18A1-201ENST00000342220 S100A7L2Q5SY68 101 aa8.78□□□□□ -1
COL18A1-201ENST00000342220 CAMK2N2Q96S95 79 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms