RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 C20orf202A1L168 122 aa9.55□□□□□ -0.88
TNFRSF12A-202ENST00000341627 S100A2P29034 98 aa9.55□□□□□ -0.88
TNFRSF12A-202ENST00000341627 SND1-IT1Q9HBX3 110 aa9.55□□□□□ -0.88
TNFRSF12A-202ENST00000341627 TP73-AS1Q9UF72 201 aa9.55□□□□□ -0.88
TNFRSF12A-202ENST00000341627 PSORS1C2Q9UIG4 136 aa9.55□□□□□ -0.88
TNFRSF12A-202ENST00000341627 J3QL48 77 aa9.54□□□□□ -0.88
TNFRSF12A-202ENST00000341627 NMUP48645 174 aa9.54□□□□□ -0.88
TNFRSF12A-202ENST00000341627 TSPEAR-AS2P59090 65 aa9.54□□□□□ -0.88
TNFRSF12A-202ENST00000341627 E9PLD3 99 aa9.53□□□□□ -0.88
TNFRSF12A-202ENST00000341627 C1orf137Q5JT78 98 aa9.53□□□□□ -0.88
TNFRSF12A-202ENST00000341627 MRPL55Q7Z7F7 128 aaKnown RBP9.53□□□□□ -0.88
TNFRSF12A-202ENST00000341627 NKAPP1Q8N9T2 125 aa9.53□□□□□ -0.88
TNFRSF12A-202ENST00000341627 IGLV5-37A0A075B6J1 123 aa9.52□□□□□ -0.89
TNFRSF12A-202ENST00000341627 A0A0U1RRA0 63 aa9.52□□□□□ -0.89
TNFRSF12A-202ENST00000341627 SMIM13P0DJ93 91 aa9.52□□□□□ -0.89
TNFRSF12A-202ENST00000341627 AKR1D1P51857 326 aa9.52□□□□□ -0.89
TNFRSF12A-202ENST00000341627 RPL24P83731 157 aaKnown RBP9.52□□□□□ -0.89
TNFRSF12A-202ENST00000341627 HIST3H2BBQ8N257 126 aa9.52□□□□□ -0.89
TNFRSF12A-202ENST00000341627 OXTP01178 125 aa9.5□□□□□ -0.89
TNFRSF12A-202ENST00000341627 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
TNFRSF12A-202ENST00000341627 KRTAP11-1Q8IUC1 163 aa9.5□□□□□ -0.89
TNFRSF12A-202ENST00000341627 MIR7-3HGQ8N6C7 128 aa9.49□□□□□ -0.89
TNFRSF12A-202ENST00000341627 HIST1H2BLQ99880 126 aa9.49□□□□□ -0.89
TNFRSF12A-202ENST00000341627 VPREB1P12018 145 aa9.48□□□□□ -0.89
TNFRSF12A-202ENST00000341627 LINC00167Q96N53 147 aa9.48□□□□□ -0.89
TNFRSF12A-202ENST00000341627 GAGE10A6NGK3 116 aa9.47□□□□□ -0.89
TNFRSF12A-202ENST00000341627 IGLV7-43P04211 117 aa9.47□□□□□ -0.89
TNFRSF12A-202ENST00000341627 SRSF9Q13242 221 aaKnown RBP eCLIP9.47□□□□□ -0.89
TNFRSF12A-202ENST00000341627 HMCN2Q8NDA2 5059 aa9.46□□□□□ -0.89
TNFRSF12A-202ENST00000341627 RPL37AP8A6NKH3 93 aa9.46□□□□□ -0.9
TNFRSF12A-202ENST00000341627 SNRPEP62304 92 aaKnown RBP9.46□□□□□ -0.9
TNFRSF12A-202ENST00000341627 BOD1L2Q8IYS8 172 aa9.45□□□□□ -0.9
TNFRSF12A-202ENST00000341627 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
TNFRSF12A-202ENST00000341627 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
TNFRSF12A-202ENST00000341627 IGKV2D-26A0A0A0MRZ7 120 aa9.43□□□□□ -0.9
TNFRSF12A-202ENST00000341627 C5orf52A6NGY3 159 aa9.43□□□□□ -0.9
TNFRSF12A-202ENST00000341627 ZNF815PA8K554 130 aa9.43□□□□□ -0.9
TNFRSF12A-202ENST00000341627 ATOH7Q8N100 152 aa9.43□□□□□ -0.9
TNFRSF12A-202ENST00000341627 MIEN1Q9BRT3 115 aa9.43□□□□□ -0.9
TNFRSF12A-202ENST00000341627 DAND5Q8N907 189 aa9.42□□□□□ -0.9
TNFRSF12A-202ENST00000341627 Q8NDZ9 215 aa9.42□□□□□ -0.9
TNFRSF12A-202ENST00000341627 DIRC1Q969H9 104 aa9.42□□□□□ -0.9
TNFRSF12A-202ENST00000341627 IGKV2-28A0A075B6P5 120 aa9.41□□□□□ -0.9
TNFRSF12A-202ENST00000341627 M0R378 163 aa9.41□□□□□ -0.9
TNFRSF12A-202ENST00000341627 BCE1O60756 84 aa9.41□□□□□ -0.9
TNFRSF12A-202ENST00000341627 IGKV2D-28P01615 120 aa9.41□□□□□ -0.9
TNFRSF12A-202ENST00000341627 IGLV1-50A0A075B6I6 118 aa9.4□□□□□ -0.9
TNFRSF12A-202ENST00000341627 LOC107984156A0A0G2JMH3 177 aa9.4□□□□□ -0.9
TNFRSF12A-202ENST00000341627 MT1HL1P0DM35 61 aa9.4□□□□□ -0.9
TNFRSF12A-202ENST00000341627 ANKRD39Q53RE8 183 aa9.4□□□□□ -0.9
TNFRSF12A-202ENST00000341627 ARL17AQ8IVW1 177 aa9.4□□□□□ -0.9
TNFRSF12A-202ENST00000341627 HSBP1L1C9JCN9 74 aa9.39□□□□□ -0.91
TNFRSF12A-202ENST00000341627 TIMM17BO60830 172 aa9.39□□□□□ -0.91
TNFRSF12A-202ENST00000341627 H0Y9J4 135 aa9.38□□□□□ -0.91
TNFRSF12A-202ENST00000341627 NCR3O14931 201 aa9.38□□□□□ -0.91
TNFRSF12A-202ENST00000341627 ZNF861PO60384 105 aa9.38□□□□□ -0.91
TNFRSF12A-202ENST00000341627 RPL28P46779 137 aaKnown RBP9.38□□□□□ -0.91
TNFRSF12A-202ENST00000341627 TTTY13Q9BZ97 58 aa9.38□□□□□ -0.91
TNFRSF12A-202ENST00000341627 TNXBP22105 4242 aa9.38□□□□□ -0.91
TNFRSF12A-202ENST00000341627 ADAMTSL4-AS1Q5T5F5 129 aa9.37□□□□□ -0.91
TNFRSF12A-202ENST00000341627 SCGB1D4Q6XE38 83 aa9.37□□□□□ -0.91
TNFRSF12A-202ENST00000341627 SCGB1D1O95968 90 aa9.36□□□□□ -0.91
TNFRSF12A-202ENST00000341627 UBE2AP49459 152 aa9.36□□□□□ -0.91
TNFRSF12A-202ENST00000341627 LINC01600Q96MT4 127 aa9.36□□□□□ -0.91
TNFRSF12A-202ENST00000341627 TMEM126AQ9H061 195 aa9.36□□□□□ -0.91
TNFRSF12A-202ENST00000341627 NDUFC2O95298 119 aa9.35□□□□□ -0.91
TNFRSF12A-202ENST00000341627 NPC2P61916 151 aa9.35□□□□□ -0.91
TNFRSF12A-202ENST00000341627 S100A12P80511 92 aa9.35□□□□□ -0.91
TNFRSF12A-202ENST00000341627 LITAFQ99732 161 aa9.35□□□□□ -0.91
TNFRSF12A-202ENST00000341627 SPANXB1Q9NS25 103 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF12A-202ENST00000341627 TRBV10-2A0A0K0K1G8 114 aa9.34□□□□□ -0.91
TNFRSF12A-202ENST00000341627 TMEM238C9JI98 176 aa9.34□□□□□ -0.91
TNFRSF12A-202ENST00000341627 PRYO14603 147 aa9.33□□□□□ -0.92
TNFRSF12A-202ENST00000341627 SOSTDC1Q6X4U4 206 aa9.33□□□□□ -0.92
TNFRSF12A-202ENST00000341627 FAM19A1Q7Z5A9 133 aa9.33□□□□□ -0.92
TNFRSF12A-202ENST00000341627 PCP2Q8IVA1 136 aa9.33□□□□□ -0.92
TNFRSF12A-202ENST00000341627 LINC00308Q8TCZ7 52 aa9.33□□□□□ -0.92
TNFRSF12A-202ENST00000341627 TRBV10-3A0A0K0K1G6 114 aa9.31□□□□□ -0.92
TNFRSF12A-202ENST00000341627 COPS9Q8WXC6 57 aa9.31□□□□□ -0.92
TNFRSF12A-202ENST00000341627 KCNQ1DNQ9H478 68 aa9.31□□□□□ -0.92
TNFRSF12A-202ENST00000341627 SPANXCQ9NY87 97 aa9.31□□□□□ -0.92
TNFRSF12A-202ENST00000341627 EIF4EBP3O60516 100 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF12A-202ENST00000341627 DDTP30046 118 aa9.3□□□□□ -0.92
TNFRSF12A-202ENST00000341627 S100A7L2Q5SY68 101 aa9.3□□□□□ -0.92
TNFRSF12A-202ENST00000341627 KRTAP13-1Q8IUC0 172 aa9.3□□□□□ -0.92
TNFRSF12A-202ENST00000341627 SPANXDQ9BXN6 97 aa9.3□□□□□ -0.92
TNFRSF12A-202ENST00000341627 PRLHP81277 87 aa9.29□□□□□ -0.92
TNFRSF12A-202ENST00000341627 Q6ZVH6 145 aa9.29□□□□□ -0.92
TNFRSF12A-202ENST00000341627 IFITM1P13164 125 aa9.27□□□□□ -0.93
TNFRSF12A-202ENST00000341627 SPRR1AP35321 89 aa9.27□□□□□ -0.93
TNFRSF12A-202ENST00000341627 LINC00337Q8N6G1 96 aa9.27□□□□□ -0.93
TNFRSF12A-202ENST00000341627 TMA7Q9Y2S6 64 aaKnown RBP9.27□□□□□ -0.93
TNFRSF12A-202ENST00000341627 CBY1Q9Y3M2 126 aa9.27□□□□□ -0.93
TNFRSF12A-202ENST00000341627 ETDCA0A1B0GVM5 59 aa9.26□□□□□ -0.93
TNFRSF12A-202ENST00000341627 IGLV6-57P01721 117 aa9.26□□□□□ -0.93
TNFRSF12A-202ENST00000341627 KRTAP1-4P0C5Y4 121 aa9.26□□□□□ -0.93
TNFRSF12A-202ENST00000341627 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
TNFRSF12A-202ENST00000341627 LINC00518Q8N0U6 118 aa9.26□□□□□ -0.93
TNFRSF12A-202ENST00000341627 PPDPFQ9H3Y8 114 aa9.26□□□□□ -0.93
TNFRSF12A-202ENST00000341627 UBR4Q5T4S7 5183 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms