RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 C4orf48Q5BLP8 95 aa7.56□□□□□ -1.2
NECTIN1-203ENST00000341398 BAGE3Q86Y29 109 aa7.56□□□□□ -1.2
NECTIN1-203ENST00000341398 HIGD2AQ9BW72 106 aa7.56□□□□□ -1.2
NECTIN1-203ENST00000341398 RPS10P5Q9NQ39 176 aa7.56□□□□□ -1.2
NECTIN1-203ENST00000341398 ATP6V1G1O75348 118 aa7.55□□□□□ -1.2
NECTIN1-203ENST00000341398 RHEBQ15382 184 aa7.55□□□□□ -1.2
NECTIN1-203ENST00000341398 TRAPPC1Q9Y5R8 145 aa7.55□□□□□ -1.2
NECTIN1-203ENST00000341398 LCE2AQ5TA79 106 aaPredicted RBP7.54□□□□□ -1.2
NECTIN1-203ENST00000341398 ZNF706Q9Y5V0 76 aaPredicted RBP7.54□□□□□ -1.2
NECTIN1-203ENST00000341398 A0A096LNJ9 63 aa7.53□□□□□ -1.2
NECTIN1-203ENST00000341398 C11orf86A6NJI1 115 aa7.53□□□□□ -1.2
NECTIN1-203ENST00000341398 C18orf32Q8TCD1 76 aa7.53□□□□□ -1.2
NECTIN1-203ENST00000341398 C3orf22Q8N5N4 141 aa7.52□□□□□ -1.21
NECTIN1-203ENST00000341398 PPDPFQ9H3Y8 114 aa7.52□□□□□ -1.21
NECTIN1-203ENST00000341398 CHTOPQ9Y3Y2 248 aaKnown RBP7.52□□□□□ -1.21
NECTIN1-203ENST00000341398 PMCHL1Q16048 86 aa7.51□□□□□ -1.21
NECTIN1-203ENST00000341398 S100A12P80511 92 aa7.5□□□□□ -1.21
NECTIN1-203ENST00000341398 COMMD7Q86VX2 200 aa7.5□□□□□ -1.21
NECTIN1-203ENST00000341398 URB1-AS1Q96HZ7 61 aa7.5□□□□□ -1.21
NECTIN1-203ENST00000341398 SPRR4Q96PI1 79 aa7.5□□□□□ -1.21
NECTIN1-203ENST00000341398 A0A0U1RRA0 63 aa7.49□□□□□ -1.21
NECTIN1-203ENST00000341398 LINC00587B1AMM8 73 aa7.49□□□□□ -1.21
NECTIN1-203ENST00000341398 C10orf91Q5T1B1 145 aa7.49□□□□□ -1.21
NECTIN1-203ENST00000341398 FP248Q71RG6 208 aaPredicted RBP7.49□□□□□ -1.21
NECTIN1-203ENST00000341398 LINC00337Q8N6G1 96 aa7.49□□□□□ -1.21
NECTIN1-203ENST00000341398 Q8NDZ9 215 aa7.49□□□□□ -1.21
NECTIN1-203ENST00000341398 PRYO14603 147 aa7.48□□□□□ -1.21
NECTIN1-203ENST00000341398 MEIG1Q5JSS6 88 aa7.48□□□□□ -1.21
NECTIN1-203ENST00000341398 TMEM223A0PJW6 202 aa7.47□□□□□ -1.21
NECTIN1-203ENST00000341398 HERV-K104P63124 156 aa7.47□□□□□ -1.21
NECTIN1-203ENST00000341398 IFITM2Q01629 132 aa7.47□□□□□ -1.21
NECTIN1-203ENST00000341398 BOD1L2Q8IYS8 172 aa7.47□□□□□ -1.21
NECTIN1-203ENST00000341398 FSIP2Q5CZC0 6907 aa7.47□□□□□ -1.21
NECTIN1-203ENST00000341398 TRAV12-1A0A0B4J245 112 aa7.46□□□□□ -1.21
NECTIN1-203ENST00000341398 ETDCA0A1B0GVM5 59 aa7.46□□□□□ -1.21
NECTIN1-203ENST00000341398 SMIM13P0DJ93 91 aa7.46□□□□□ -1.21
NECTIN1-203ENST00000341398 MAP1LC3CQ9BXW4 147 aa7.46□□□□□ -1.21
NECTIN1-203ENST00000341398 MUC17Q685J3 4493 aa7.46□□□□□ -1.22
NECTIN1-203ENST00000341398 SPINK1P00995 79 aa7.46□□□□□ -1.22
NECTIN1-203ENST00000341398 SMCR5Q8TEV8 140 aa7.46□□□□□ -1.22
NECTIN1-203ENST00000341398 IFI27L1Q96BM0 104 aa7.46□□□□□ -1.22
NECTIN1-203ENST00000341398 KCNQ1DNQ9H478 68 aa7.46□□□□□ -1.22
NECTIN1-203ENST00000341398 Q8NBF4 154 aa7.45□□□□□ -1.22
NECTIN1-203ENST00000341398 CHCHD1Q96BP2 118 aaKnown RBP7.45□□□□□ -1.22
NECTIN1-203ENST00000341398 NCR3O14931 201 aa7.44□□□□□ -1.22
NECTIN1-203ENST00000341398 NDUFA5Q16718 116 aa7.44□□□□□ -1.22
NECTIN1-203ENST00000341398 MIR7-3HGQ8N6C7 128 aa7.44□□□□□ -1.22
NECTIN1-203ENST00000341398 MYMXA0A1B0GTQ4 84 aa7.43□□□□□ -1.22
NECTIN1-203ENST00000341398 SNAPINO95295 136 aa7.43□□□□□ -1.22
NECTIN1-203ENST00000341398 SPRR1AP35321 89 aa7.43□□□□□ -1.22
NECTIN1-203ENST00000341398 DAND5Q8N907 189 aa7.43□□□□□ -1.22
NECTIN1-203ENST00000341398 NDUFA12Q9UI09 145 aa7.43□□□□□ -1.22
NECTIN1-203ENST00000341398 APOC3P02656 99 aa7.42□□□□□ -1.22
NECTIN1-203ENST00000341398 SVBPQ8N300 66 aa7.41□□□□□ -1.22
NECTIN1-203ENST00000341398 TRBV10-3A0A0K0K1G6 114 aa7.4□□□□□ -1.22
NECTIN1-203ENST00000341398 GAGE2AQ6NT46 116 aa7.4□□□□□ -1.22
NECTIN1-203ENST00000341398 SSBP3-AS1Q7Z2R9 100 aa7.4□□□□□ -1.22
NECTIN1-203ENST00000341398 FAM19A2Q8N3H0 131 aa7.4□□□□□ -1.22
NECTIN1-203ENST00000341398 KRTAP4-16G5E9R7 235 aaPredicted RBP7.39□□□□□ -1.23
NECTIN1-203ENST00000341398 HSBP1O75506 76 aa7.39□□□□□ -1.23
NECTIN1-203ENST00000341398 KRTAP13-3Q3SY46 172 aa7.39□□□□□ -1.23
NECTIN1-203ENST00000341398 LINC00483Q53H64 154 aa7.39□□□□□ -1.23
NECTIN1-203ENST00000341398 SEC61BP60468 96 aaKnown RBP7.38□□□□□ -1.23
NECTIN1-203ENST00000341398 IGLV9-49A0A0B4J1Y8 123 aa7.37□□□□□ -1.23
NECTIN1-203ENST00000341398 TRBV10-2A0A0K0K1G8 114 aa7.37□□□□□ -1.23
NECTIN1-203ENST00000341398 B5MCH6 92 aa7.37□□□□□ -1.23
NECTIN1-203ENST00000341398 DDTP30046 118 aa7.37□□□□□ -1.23
NECTIN1-203ENST00000341398 RPS29P62273 56 aaKnown RBP7.37□□□□□ -1.23
NECTIN1-203ENST00000341398 ASB16-AS1Q495Z4 193 aa7.37□□□□□ -1.23
NECTIN1-203ENST00000341398 MIEN1Q9BRT3 115 aa7.37□□□□□ -1.23
NECTIN1-203ENST00000341398 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
NECTIN1-203ENST00000341398 LOC107984156A0A0G2JMH3 177 aa7.36□□□□□ -1.23
NECTIN1-203ENST00000341398 H0Y8G0 127 aa7.36□□□□□ -1.23
NECTIN1-203ENST00000341398 LINC01547P58512 204 aaPredicted RBP7.36□□□□□ -1.23
NECTIN1-203ENST00000341398 MOBPQ13875 183 aa7.36□□□□□ -1.23
NECTIN1-203ENST00000341398 ARL17AQ8IVW1 177 aa7.36□□□□□ -1.23
NECTIN1-203ENST00000341398 LEPROTO15243 131 aa7.35□□□□□ -1.23
NECTIN1-203ENST00000341398 SLC25A20O43772 301 aa7.35□□□□□ -1.23
NECTIN1-203ENST00000341398 JOSD1Q15040 202 aaPredicted RBP7.35□□□□□ -1.23
NECTIN1-203ENST00000341398 S100A7L2Q5SY68 101 aa7.35□□□□□ -1.23
NECTIN1-203ENST00000341398 PLNP26678 52 aa7.34□□□□□ -1.23
NECTIN1-203ENST00000341398 HERVK_113P61574 105 aa7.34□□□□□ -1.23
NECTIN1-203ENST00000341398 SPANXB1Q9NS25 103 aaPredicted RBP7.34□□□□□ -1.23
NECTIN1-203ENST00000341398 LEPROTL1O95214 131 aa7.33□□□□□ -1.24
NECTIN1-203ENST00000341398 NMUP48645 174 aa7.33□□□□□ -1.24
NECTIN1-203ENST00000341398 Q6ZRX8 168 aa7.33□□□□□ -1.24
NECTIN1-203ENST00000341398 J3QQQ9 107 aa7.33□□□□□ -1.24
NECTIN1-203ENST00000341398 ERC2-IT1O76042 136 aa7.33□□□□□ -1.24
NECTIN1-203ENST00000341398 NDUFC2O95298 119 aa7.33□□□□□ -1.24
NECTIN1-203ENST00000341398 Q8N377 158 aa7.33□□□□□ -1.24
NECTIN1-203ENST00000341398 CBY1Q9Y3M2 126 aa7.33□□□□□ -1.24
NECTIN1-203ENST00000341398 LGALS3P17931 250 aaKnown RBP7.32□□□□□ -1.24
NECTIN1-203ENST00000341398 HINT1P49773 126 aaPredicted RBP7.32□□□□□ -1.24
NECTIN1-203ENST00000341398 HSPB8Q9UJY1 196 aa7.32□□□□□ -1.24
NECTIN1-203ENST00000341398 C9orf153Q5TBE3 101 aa7.31□□□□□ -1.24
NECTIN1-203ENST00000341398 YPEL4Q96NS1 127 aa7.31□□□□□ -1.24
NECTIN1-203ENST00000341398 Q9BRP9 147 aa7.31□□□□□ -1.24
NECTIN1-203ENST00000341398 DPM2O94777 84 aa7.3□□□□□ -1.24
NECTIN1-203ENST00000341398 TSPEAR-AS2P59090 65 aa7.3□□□□□ -1.24
NECTIN1-203ENST00000341398 TRAV23DV6A0A075B6W5 121 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms