RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 UQCR10Q9UDW1 63 aa6.59□□□□□ -1.35
TPM3-207ENST00000341372 ABCA13Q86UQ4 5058 aa6.59□□□□□ -1.35
TPM3-207ENST00000341372 DPM2O94777 84 aa6.59□□□□□ -1.36
TPM3-207ENST00000341372 PRR3P79522 188 aaKnown RBP6.59□□□□□ -1.36
TPM3-207ENST00000341372 VPS13BQ7Z7G8 4022 aa6.58□□□□□ -1.36
TPM3-207ENST00000341372 PCLOQ9Y6V0 5065 aa6.58□□□□□ -1.36
TPM3-207ENST00000341372 IGHV1-58A0A0C4DH39 117 aa6.58□□□□□ -1.36
TPM3-207ENST00000341372 LINC01549A6NIU2 74 aa6.58□□□□□ -1.36
TPM3-207ENST00000341372 COX8AP10176 69 aa6.58□□□□□ -1.36
TPM3-207ENST00000341372 PMVKQ15126 192 aa6.58□□□□□ -1.36
TPM3-207ENST00000341372 AMELXQ99217 191 aa6.58□□□□□ -1.36
TPM3-207ENST00000341372 SNHG12Q9BXW3 62 aa6.58□□□□□ -1.36
TPM3-207ENST00000341372 TRAV13-1A0A0B4J241 112 aa6.57□□□□□ -1.36
TPM3-207ENST00000341372 C11orf86A6NJI1 115 aa6.57□□□□□ -1.36
TPM3-207ENST00000341372 C2orf91Q6ZV80 131 aa6.57□□□□□ -1.36
TPM3-207ENST00000341372 PCP2Q8IVA1 136 aa6.57□□□□□ -1.36
TPM3-207ENST00000341372 TTTY13Q9BZ97 58 aa6.57□□□□□ -1.36
TPM3-207ENST00000341372 A0A1B0GV90 55 aa6.57□□□□□ -1.36
TPM3-207ENST00000341372 SDIM1Q6ZPB5 146 aa6.57□□□□□ -1.36
TPM3-207ENST00000341372 NKAPP1Q8N9T2 125 aa6.57□□□□□ -1.36
TPM3-207ENST00000341372 Q8NBF4 154 aa6.57□□□□□ -1.36
TPM3-207ENST00000341372 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.56□□□□□ -1.36
TPM3-207ENST00000341372 HAMPP81172 84 aa6.56□□□□□ -1.36
TPM3-207ENST00000341372 KIAA0087Q14695 138 aa6.56□□□□□ -1.36
TPM3-207ENST00000341372 HIGD2BQ4VC39 106 aa6.56□□□□□ -1.36
TPM3-207ENST00000341372 SCXQ7RTU7 201 aa6.56□□□□□ -1.36
TPM3-207ENST00000341372 CHAC1Q9BUX1 264 aa6.56□□□□□ -1.36
TPM3-207ENST00000341372 IGHV3OR16-9A0A0B4J2B5 98 aa6.55□□□□□ -1.36
TPM3-207ENST00000341372 COX7A2LO14548 114 aa6.55□□□□□ -1.36
TPM3-207ENST00000341372 PLNP26678 52 aa6.55□□□□□ -1.36
TPM3-207ENST00000341372 CIRBPQ14011 172 aaKnown RBP6.55□□□□□ -1.36
TPM3-207ENST00000341372 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
TPM3-207ENST00000341372 IGHV3-64A0A075B6Q5 118 aa6.55□□□□□ -1.36
TPM3-207ENST00000341372 SLC25A34Q6PIV7 304 aa6.55□□□□□ -1.36
TPM3-207ENST00000341372 EPM2AB3EWF7 344 aa6.54□□□□□ -1.36
TPM3-207ENST00000341372 A0A0J9YXV3 536 aa6.54□□□□□ -1.36
TPM3-207ENST00000341372 DLEU1O43261 78 aa6.54□□□□□ -1.36
TPM3-207ENST00000341372 UBE2D1P51668 147 aa6.54□□□□□ -1.36
TPM3-207ENST00000341372 Q5VSD8 79 aa6.54□□□□□ -1.36
TPM3-207ENST00000341372 FAM19A3Q7Z5A8 133 aa6.54□□□□□ -1.36
TPM3-207ENST00000341372 H0Y9J4 135 aa6.53□□□□□ -1.36
TPM3-207ENST00000341372 NMUP48645 174 aa6.53□□□□□ -1.36
TPM3-207ENST00000341372 C5orf38Q86SI9 138 aa6.53□□□□□ -1.36
TPM3-207ENST00000341372 CIRBP-AS1Q8TBR5 109 aa6.53□□□□□ -1.36
TPM3-207ENST00000341372 PANO1I0J062 215 aa6.52□□□□□ -1.37
TPM3-207ENST00000341372 APOMO95445 188 aa6.52□□□□□ -1.37
TPM3-207ENST00000341372 SMR3BP02814 79 aaPredicted RBP6.52□□□□□ -1.37
TPM3-207ENST00000341372 C2orf88Q9BSF0 95 aa6.52□□□□□ -1.37
TPM3-207ENST00000341372 M0R143 59 aa6.52□□□□□ -1.37
TPM3-207ENST00000341372 ZNF22P17026 224 aaPredicted RBP6.52□□□□□ -1.37
TPM3-207ENST00000341372 PRR4Q16378 134 aa6.52□□□□□ -1.37
TPM3-207ENST00000341372 CARD19Q96LW7 228 aa6.52□□□□□ -1.37
TPM3-207ENST00000341372 TSPEAR-AS2P59090 65 aa6.51□□□□□ -1.37
TPM3-207ENST00000341372 SYCNQ0VAF6 134 aa6.51□□□□□ -1.37
TPM3-207ENST00000341372 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
TPM3-207ENST00000341372 SPACA4Q8TDM5 124 aa6.51□□□□□ -1.37
TPM3-207ENST00000341372 LINC00526Q96FQ7 95 aa6.51□□□□□ -1.37
TPM3-207ENST00000341372 TMEM223A0PJW6 202 aa6.5□□□□□ -1.37
TPM3-207ENST00000341372 COX6A2Q02221 97 aa6.5□□□□□ -1.37
TPM3-207ENST00000341372 SPAG11BQ08648 103 aa6.5□□□□□ -1.37
TPM3-207ENST00000341372 PKIGQ9Y2B9 76 aa6.5□□□□□ -1.37
TPM3-207ENST00000341372 HINT1P49773 126 aaPredicted RBP6.5□□□□□ -1.37
TPM3-207ENST00000341372 CHTF8P0CG12 524 aa6.49□□□□□ -1.37
TPM3-207ENST00000341372 CXCL6P80162 114 aa6.49□□□□□ -1.37
TPM3-207ENST00000341372 Q6ZRU5 148 aa6.49□□□□□ -1.37
TPM3-207ENST00000341372 ORAOV1Q8WV07 137 aa6.49□□□□□ -1.37
TPM3-207ENST00000341372 SRRM2Q9UQ35 2752 aaKnown RBP6.49□□□□□ -1.37
TPM3-207ENST00000341372 SEC11AP67812 179 aa6.49□□□□□ -1.37
TPM3-207ENST00000341372 TMEM170BQ5T4T1 132 aa6.49□□□□□ -1.37
TPM3-207ENST00000341372 CAMK2N2Q96S95 79 aa6.49□□□□□ -1.37
TPM3-207ENST00000341372 A0A096LNI7 61 aa6.48□□□□□ -1.37
TPM3-207ENST00000341372 SMIM26A0A096LP01 95 aa6.48□□□□□ -1.37
TPM3-207ENST00000341372 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
TPM3-207ENST00000341372 HERVK_113P63121 156 aa6.48□□□□□ -1.37
TPM3-207ENST00000341372 BVES-AS1Q5T3Y7 98 aa6.48□□□□□ -1.37
TPM3-207ENST00000341372 A0A087WYN8 130 aa6.47□□□□□ -1.37
TPM3-207ENST00000341372 PLEKHB2Q96CS7 222 aa6.47□□□□□ -1.37
TPM3-207ENST00000341372 PLAC8Q9NZF1 115 aa6.47□□□□□ -1.37
TPM3-207ENST00000341372 BATFQ16520 125 aa6.47□□□□□ -1.37
TPM3-207ENST00000341372 HIGD1BQ9P298 99 aa6.47□□□□□ -1.37
TPM3-207ENST00000341372 MYMXA0A1B0GTQ4 84 aa6.46□□□□□ -1.38
TPM3-207ENST00000341372 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
TPM3-207ENST00000341372 LINC00474Q9P2X8 69 aa6.46□□□□□ -1.38
TPM3-207ENST00000341372 CDKN2A-AS1Q9UH64 79 aa6.46□□□□□ -1.38
TPM3-207ENST00000341372 LOC107984640A0A0U1RRK4 108 aa6.45□□□□□ -1.38
TPM3-207ENST00000341372 NDUFA1O15239 70 aa6.45□□□□□ -1.38
TPM3-207ENST00000341372 PKHD1L1Q86WI1 4243 aa6.45□□□□□ -1.38
TPM3-207ENST00000341372 LEPROTO15243 131 aa6.45□□□□□ -1.38
TPM3-207ENST00000341372 INAFM2P0DMQ5 153 aa6.45□□□□□ -1.38
TPM3-207ENST00000341372 C1orf195Q5TG92 126 aa6.45□□□□□ -1.38
TPM3-207ENST00000341372 FLG2Q5D862 2391 aaPredicted RBP6.45□□□□□ -1.38
TPM3-207ENST00000341372 IGKV2-24A0A0C4DH68 120 aa6.44□□□□□ -1.38
TPM3-207ENST00000341372 J3QQQ9 107 aa6.44□□□□□ -1.38
TPM3-207ENST00000341372 SPINK8P0C7L1 97 aa6.44□□□□□ -1.38
TPM3-207ENST00000341372 TLX1NBP0CAT3 122 aa6.44□□□□□ -1.38
TPM3-207ENST00000341372 Q8IZM0 81 aa6.44□□□□□ -1.38
TPM3-207ENST00000341372 ZNF815PA8K554 130 aa6.43□□□□□ -1.38
TPM3-207ENST00000341372 NDUFS5O43920 106 aa6.43□□□□□ -1.38
TPM3-207ENST00000341372 HERVK_113P61574 105 aa6.43□□□□□ -1.38
TPM3-207ENST00000341372 UNQ6190/PRO20217Q6UXQ8 127 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms