RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 A0A096LNJ9 63 aa9.36□□□□□ -0.91
H3F3C-201ENST00000340398 TMEM218A2RU14 115 aa9.36□□□□□ -0.91
H3F3C-201ENST00000340398 RPL24P83731 157 aaKnown RBP9.36□□□□□ -0.91
H3F3C-201ENST00000340398 CBLN2Q8IUK8 224 aa9.36□□□□□ -0.91
H3F3C-201ENST00000340398 PPDPFQ9H3Y8 114 aa9.36□□□□□ -0.91
H3F3C-201ENST00000340398 S100PP25815 95 aa9.34□□□□□ -0.91
H3F3C-201ENST00000340398 URB1-AS1Q96HZ7 61 aa9.34□□□□□ -0.91
H3F3C-201ENST00000340398 HIGD2AQ9BW72 106 aa9.34□□□□□ -0.91
H3F3C-201ENST00000340398 COX17Q14061 63 aa9.33□□□□□ -0.92
H3F3C-201ENST00000340398 PMCHL1Q16048 86 aa9.33□□□□□ -0.92
H3F3C-201ENST00000340398 A0A0U1RRA0 63 aa9.31□□□□□ -0.92
H3F3C-201ENST00000340398 C11orf86A6NJI1 115 aa9.31□□□□□ -0.92
H3F3C-201ENST00000340398 CTAG1AP78358 180 aa9.31□□□□□ -0.92
H3F3C-201ENST00000340398 LINC00614P0C842 121 aa9.3□□□□□ -0.92
H3F3C-201ENST00000340398 LINC00158P58513 81 aa9.3□□□□□ -0.92
H3F3C-201ENST00000340398 TMEM170BQ5T4T1 132 aa9.3□□□□□ -0.92
H3F3C-201ENST00000340398 UQCC3Q6UW78 93 aa9.3□□□□□ -0.92
H3F3C-201ENST00000340398 BAGE3Q86Y29 109 aa9.3□□□□□ -0.92
H3F3C-201ENST00000340398 SPRR4Q96PI1 79 aa9.3□□□□□ -0.92
H3F3C-201ENST00000340398 KRTAP9-6A0A140TA67 174 aa9.29□□□□□ -0.92
H3F3C-201ENST00000340398 COX19Q49B96 90 aa9.29□□□□□ -0.92
H3F3C-201ENST00000340398 COMMD7Q86VX2 200 aa9.29□□□□□ -0.92
H3F3C-201ENST00000340398 DAND5Q8N907 189 aa9.29□□□□□ -0.92
H3F3C-201ENST00000340398 SEC11CQ9BY50 192 aa9.29□□□□□ -0.92
H3F3C-201ENST00000340398 SPAG11AQ6PDA7 123 aa9.28□□□□□ -0.92
H3F3C-201ENST00000340398 C18orf32Q8TCD1 76 aa9.28□□□□□ -0.92
H3F3C-201ENST00000340398 HBDP02042 147 aa9.27□□□□□ -0.93
H3F3C-201ENST00000340398 Q8NBF4 154 aa9.25□□□□□ -0.93
H3F3C-201ENST00000340398 RPS10P5Q9NQ39 176 aa9.25□□□□□ -0.93
H3F3C-201ENST00000340398 TRAPPC1Q9Y5R8 145 aa9.25□□□□□ -0.93
H3F3C-201ENST00000340398 LINC00337Q8N6G1 96 aa9.24□□□□□ -0.93
H3F3C-201ENST00000340398 SMCR5Q8TEV8 140 aa9.24□□□□□ -0.93
H3F3C-201ENST00000340398 SMIM13P0DJ93 91 aa9.23□□□□□ -0.93
H3F3C-201ENST00000340398 KRTAP13-3Q3SY46 172 aa9.23□□□□□ -0.93
H3F3C-201ENST00000340398 CHTOPQ9Y3Y2 248 aaKnown RBP9.23□□□□□ -0.93
H3F3C-201ENST00000340398 SFTA2Q6UW10 78 aa9.22□□□□□ -0.93
H3F3C-201ENST00000340398 FP248Q71RG6 208 aaPredicted RBP9.22□□□□□ -0.93
H3F3C-201ENST00000340398 KRTAP4-1Q9BYQ7 146 aa9.22□□□□□ -0.93
H3F3C-201ENST00000340398 TMEM223A0PJW6 202 aa9.21□□□□□ -0.94
H3F3C-201ENST00000340398 NCR3O14931 201 aa9.21□□□□□ -0.94
H3F3C-201ENST00000340398 C10orf91Q5T1B1 145 aa9.21□□□□□ -0.94
H3F3C-201ENST00000340398 BOD1L2Q8IYS8 172 aa9.21□□□□□ -0.94
H3F3C-201ENST00000340398 ZNF706Q9Y5V0 76 aaPredicted RBP9.21□□□□□ -0.94
H3F3C-201ENST00000340398 KRTAP4-16G5E9R7 235 aaPredicted RBP9.19□□□□□ -0.94
H3F3C-201ENST00000340398 PRYO14603 147 aa9.19□□□□□ -0.94
H3F3C-201ENST00000340398 SPRR1AP35321 89 aa9.19□□□□□ -0.94
H3F3C-201ENST00000340398 RHEBQ15382 184 aa9.19□□□□□ -0.94
H3F3C-201ENST00000340398 KCNQ1DNQ9H478 68 aa9.19□□□□□ -0.94
H3F3C-201ENST00000340398 ASB16-AS1Q495Z4 193 aa9.18□□□□□ -0.94
H3F3C-201ENST00000340398 MEIG1Q5JSS6 88 aa9.18□□□□□ -0.94
H3F3C-201ENST00000340398 MIR7-3HGQ8N6C7 128 aa9.18□□□□□ -0.94
H3F3C-201ENST00000340398 TRBV10-3A0A0K0K1G6 114 aa9.17□□□□□ -0.94
H3F3C-201ENST00000340398 GAGE2AQ6NT46 116 aa9.17□□□□□ -0.94
H3F3C-201ENST00000340398 ETDCA0A1B0GVM5 59 aa9.16□□□□□ -0.94
H3F3C-201ENST00000340398 SPINK1P00995 79 aa9.16□□□□□ -0.94
H3F3C-201ENST00000340398 ERC2-IT1O76042 136 aa9.15□□□□□ -0.94
H3F3C-201ENST00000340398 LINC00483Q53H64 154 aa9.15□□□□□ -0.94
H3F3C-201ENST00000340398 IFI27L1Q96BM0 104 aa9.15□□□□□ -0.94
H3F3C-201ENST00000340398 IGLV9-49A0A0B4J1Y8 123 aa9.14□□□□□ -0.95
H3F3C-201ENST00000340398 TRAV12-1A0A0B4J245 112 aa9.14□□□□□ -0.95
H3F3C-201ENST00000340398 LINC01547P58512 204 aaPredicted RBP9.13□□□□□ -0.95
H3F3C-201ENST00000340398 MOBPQ13875 183 aa9.13□□□□□ -0.95
H3F3C-201ENST00000340398 B5MCH6 92 aa9.12□□□□□ -0.95
H3F3C-201ENST00000340398 NDUFA12Q9UI09 145 aa9.12□□□□□ -0.95
H3F3C-201ENST00000340398 HERV-K104P63124 156 aa9.11□□□□□ -0.95
H3F3C-201ENST00000340398 LCE2CQ5TA81 110 aa9.11□□□□□ -0.95
H3F3C-201ENST00000340398 Q8N377 158 aa9.11□□□□□ -0.95
H3F3C-201ENST00000340398 SEC61BP60468 96 aaKnown RBP9.1□□□□□ -0.95
H3F3C-201ENST00000340398 SSBP3-AS1Q7Z2R9 100 aa9.1□□□□□ -0.95
H3F3C-201ENST00000340398 SVBPQ8N300 66 aa9.09□□□□□ -0.95
H3F3C-201ENST00000340398 FAM19A2Q8N3H0 131 aa9.09□□□□□ -0.95
H3F3C-201ENST00000340398 CHCHD1Q96BP2 118 aaKnown RBP9.09□□□□□ -0.95
H3F3C-201ENST00000340398 Q9BRP9 147 aa9.09□□□□□ -0.95
H3F3C-201ENST00000340398 MYMXA0A1B0GTQ4 84 aa9.08□□□□□ -0.96
H3F3C-201ENST00000340398 TSPEAR-AS2P59090 65 aa9.08□□□□□ -0.96
H3F3C-201ENST00000340398 LINC00587B1AMM8 73 aa9.07□□□□□ -0.96
H3F3C-201ENST00000340398 H0Y8G0 127 aa9.07□□□□□ -0.96
H3F3C-201ENST00000340398 APOC3P02656 99 aa9.07□□□□□ -0.96
H3F3C-201ENST00000340398 DDTP30046 118 aa9.07□□□□□ -0.96
H3F3C-201ENST00000340398 MAP1LC3CQ9BXW4 147 aa9.06□□□□□ -0.96
H3F3C-201ENST00000340398 LOC107984156A0A0G2JMH3 177 aa9.05□□□□□ -0.96
H3F3C-201ENST00000340398 SNAPINO95295 136 aa9.05□□□□□ -0.96
H3F3C-201ENST00000340398 S100A12P80511 92 aa9.05□□□□□ -0.96
H3F3C-201ENST00000340398 ARL17AQ8IVW1 177 aa9.05□□□□□ -0.96
H3F3C-201ENST00000340398 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
H3F3C-201ENST00000340398 SLC25A20O43772 301 aa9.04□□□□□ -0.96
H3F3C-201ENST00000340398 RPS29P62273 56 aaKnown RBP9.04□□□□□ -0.96
H3F3C-201ENST00000340398 TMA7Q9Y2S6 64 aaKnown RBP9.04□□□□□ -0.96
H3F3C-201ENST00000340398 TRBV10-2A0A0K0K1G8 114 aa9.03□□□□□ -0.96
H3F3C-201ENST00000340398 LEPROTO15243 131 aa9.03□□□□□ -0.96
H3F3C-201ENST00000340398 XP32Q5T750 250 aa9.03□□□□□ -0.96
H3F3C-201ENST00000340398 Q6ZRX8 168 aa9.03□□□□□ -0.96
H3F3C-201ENST00000340398 HSBP1O75506 76 aa9.02□□□□□ -0.97
H3F3C-201ENST00000340398 C9orf153Q5TBE3 101 aa9.01□□□□□ -0.97
H3F3C-201ENST00000340398 ST20-AS1Q8NBB2 130 aa9.01□□□□□ -0.97
H3F3C-201ENST00000340398 EIF4EBP3O60516 100 aaPredicted RBP9□□□□□ -0.97
H3F3C-201ENST00000340398 IGLV6-57P01721 117 aa9□□□□□ -0.97
H3F3C-201ENST00000340398 S100A7L2Q5SY68 101 aa9□□□□□ -0.97
H3F3C-201ENST00000340398 NPC2P61916 151 aa8.99□□□□□ -0.97
H3F3C-201ENST00000340398 PMCHL2Q9BQD1 86 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms