RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 IGLV1-50A0A075B6I6 118 aa8.76□□□□□ -1.01
ERCC1-203ENST00000340192 PLNP26678 52 aa8.76□□□□□ -1.01
ERCC1-203ENST00000340192 SMIM13P0DJ93 91 aa8.75□□□□□ -1.01
ERCC1-203ENST00000340192 HERV-K104P63124 156 aa8.75□□□□□ -1.01
ERCC1-203ENST00000340192 PMCHL2Q9BQD1 86 aa8.75□□□□□ -1.01
ERCC1-203ENST00000340192 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
ERCC1-203ENST00000340192 UBR4Q5T4S7 5183 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 HIST1H2BKO60814 126 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 DPM2O94777 84 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 HIST1H2BJP06899 126 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 HIST1H2BOP23527 126 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 HIST1H2BBP33778 126 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 HIST1H2BDP58876 126 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 TSPEAR-AS2P59090 65 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 HIST1H2BCP62807 126 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 HIST2H2BEQ16778 126 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 MEIG1Q5JSS6 88 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.74□□□□□ -1.01
ERCC1-203ENST00000340192 HIST1H2BHQ93079 126 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 HIST1H2BNQ99877 126 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 HIST1H2BMQ99879 126 aa8.74□□□□□ -1.01
ERCC1-203ENST00000340192 MYMXA0A1B0GTQ4 84 aa8.73□□□□□ -1.01
ERCC1-203ENST00000340192 LEPROTO15243 131 aa8.73□□□□□ -1.01
ERCC1-203ENST00000340192 ATP6V1G1O75348 118 aa8.73□□□□□ -1.01
ERCC1-203ENST00000340192 KRTAP13-1Q8IUC0 172 aa8.73□□□□□ -1.01
ERCC1-203ENST00000340192 MAP1LC3CQ9BXW4 147 aa8.73□□□□□ -1.01
ERCC1-203ENST00000340192 TMEM238C9JI98 176 aa8.72□□□□□ -1.01
ERCC1-203ENST00000340192 IGKCP01834 107 aa8.72□□□□□ -1.01
ERCC1-203ENST00000340192 UBE2AP49459 152 aa8.72□□□□□ -1.01
ERCC1-203ENST00000340192 MIR7-3HGQ8N6C7 128 aa8.72□□□□□ -1.01
ERCC1-203ENST00000340192 RPL13AP40429 203 aaKnown RBP8.71□□□□□ -1.02
ERCC1-203ENST00000340192 PLEKHB2Q96CS7 222 aa8.71□□□□□ -1.02
ERCC1-203ENST00000340192 TMEM126AQ9H061 195 aa8.71□□□□□ -1.02
ERCC1-203ENST00000340192 LINC00587B1AMM8 73 aa8.7□□□□□ -1.02
ERCC1-203ENST00000340192 J3QQQ9 107 aa8.7□□□□□ -1.02
ERCC1-203ENST00000340192 HERVK_113P61574 105 aa8.7□□□□□ -1.02
ERCC1-203ENST00000340192 M0R378 163 aa8.69□□□□□ -1.02
ERCC1-203ENST00000340192 PRLHP81277 87 aa8.69□□□□□ -1.02
ERCC1-203ENST00000340192 BOD1L2Q8IYS8 172 aa8.69□□□□□ -1.02
ERCC1-203ENST00000340192 FAM19A1Q7Z5A9 133 aa8.68□□□□□ -1.02
ERCC1-203ENST00000340192 A0A087X002 238 aa8.67□□□□□ -1.02
ERCC1-203ENST00000340192 SYS1-DBNDD2H3BUS1 97 aa8.67□□□□□ -1.02
ERCC1-203ENST00000340192 LGALS3P17931 250 aaKnown RBP8.67□□□□□ -1.02
ERCC1-203ENST00000340192 NMUP48645 174 aa8.67□□□□□ -1.02
ERCC1-203ENST00000340192 NCR3O14931 201 aa8.66□□□□□ -1.02
ERCC1-203ENST00000340192 DAND5Q8N907 189 aa8.66□□□□□ -1.02
ERCC1-203ENST00000340192 ANAPC11Q9NYG5 84 aa8.66□□□□□ -1.02
ERCC1-203ENST00000340192 LRP2P98164 4655 aa8.66□□□□□ -1.02
ERCC1-203ENST00000340192 E9PLD3 99 aa8.64□□□□□ -1.03
ERCC1-203ENST00000340192 CRYGAP11844 174 aa8.64□□□□□ -1.03
ERCC1-203ENST00000340192 IGKV2D-26A0A0A0MRZ7 120 aa8.63□□□□□ -1.03
ERCC1-203ENST00000340192 LOC107984156A0A0G2JMH3 177 aa8.63□□□□□ -1.03
ERCC1-203ENST00000340192 ARL17AQ8IVW1 177 aa8.63□□□□□ -1.03
ERCC1-203ENST00000340192 PRYO14603 147 aa8.62□□□□□ -1.03
ERCC1-203ENST00000340192 COA6Q5JTJ3 125 aaKnown RBP8.62□□□□□ -1.03
ERCC1-203ENST00000340192 LINC01545Q5VT33 79 aa8.62□□□□□ -1.03
ERCC1-203ENST00000340192 PET117Q6UWS5 81 aa8.62□□□□□ -1.03
ERCC1-203ENST00000340192 TRBV10-3A0A0K0K1G6 114 aa8.61□□□□□ -1.03
ERCC1-203ENST00000340192 TYMSOSQ8TAI1 123 aa8.61□□□□□ -1.03
ERCC1-203ENST00000340192 HIGD2AQ9BW72 106 aa8.61□□□□□ -1.03
ERCC1-203ENST00000340192 KCNQ1DNQ9H478 68 aa8.61□□□□□ -1.03
ERCC1-203ENST00000340192 A0A0J9YXY3 114 aa8.6□□□□□ -1.03
ERCC1-203ENST00000340192 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
ERCC1-203ENST00000340192 FAM229BQ4G0N7 80 aa8.6□□□□□ -1.03
ERCC1-203ENST00000340192 KRTAP13-2Q52LG2 175 aa8.6□□□□□ -1.03
ERCC1-203ENST00000340192 ADAMTSL4-AS1Q5T5F5 129 aa8.59□□□□□ -1.03
ERCC1-203ENST00000340192 MIEN1Q9BRT3 115 aa8.59□□□□□ -1.03
ERCC1-203ENST00000340192 TRBV10-2A0A0K0K1G8 114 aa8.58□□□□□ -1.04
ERCC1-203ENST00000340192 SPRR1AP35321 89 aa8.58□□□□□ -1.04
ERCC1-203ENST00000340192 KRTDAPP60985 99 aa8.58□□□□□ -1.04
ERCC1-203ENST00000340192 LINC00337Q8N6G1 96 aa8.58□□□□□ -1.04
ERCC1-203ENST00000340192 LPAP08519 4548 aa8.58□□□□□ -1.04
ERCC1-203ENST00000340192 KRTAP4-16G5E9R7 235 aaPredicted RBP8.57□□□□□ -1.04
ERCC1-203ENST00000340192 TSPAN13O95857 204 aa8.57□□□□□ -1.04
ERCC1-203ENST00000340192 NPC2P61916 151 aa8.57□□□□□ -1.04
ERCC1-203ENST00000340192 SPANXB1Q9NS25 103 aaPredicted RBP8.57□□□□□ -1.04
ERCC1-203ENST00000340192 ETDCA0A1B0GVM5 59 aa8.56□□□□□ -1.04
ERCC1-203ENST00000340192 EIF4EBP3O60516 100 aaPredicted RBP8.56□□□□□ -1.04
ERCC1-203ENST00000340192 NDUFC2O95298 119 aa8.56□□□□□ -1.04
ERCC1-203ENST00000340192 DDTP30046 118 aa8.56□□□□□ -1.04
ERCC1-203ENST00000340192 S100A12P80511 92 aa8.56□□□□□ -1.04
ERCC1-203ENST00000340192 SOSTDC1Q6X4U4 206 aa8.56□□□□□ -1.04
ERCC1-203ENST00000340192 SPRR4Q96PI1 79 aa8.54□□□□□ -1.04
ERCC1-203ENST00000340192 LITAFQ99732 161 aa8.54□□□□□ -1.04
ERCC1-203ENST00000340192 ZNF815PA8K554 130 aa8.53□□□□□ -1.04
ERCC1-203ENST00000340192 IGLV6-57P01721 117 aa8.53□□□□□ -1.04
ERCC1-203ENST00000340192 PRR4Q16378 134 aa8.53□□□□□ -1.04
ERCC1-203ENST00000340192 S100A7L2Q5SY68 101 aa8.53□□□□□ -1.04
ERCC1-203ENST00000340192 TTTY13Q9BZ97 58 aa8.53□□□□□ -1.04
ERCC1-203ENST00000340192 ZNF706Q9Y5V0 76 aaPredicted RBP8.53□□□□□ -1.04
ERCC1-203ENST00000340192 C20orf202A1L168 122 aa8.52□□□□□ -1.05
ERCC1-203ENST00000340192 B5MCH6 92 aa8.52□□□□□ -1.05
ERCC1-203ENST00000340192 TIMM17BO60830 172 aa8.52□□□□□ -1.05
ERCC1-203ENST00000340192 SMCR5Q8TEV8 140 aa8.52□□□□□ -1.05
ERCC1-203ENST00000340192 S100A1P23297 94 aa8.51□□□□□ -1.05
ERCC1-203ENST00000340192 C3orf22Q8N5N4 141 aa8.51□□□□□ -1.05
ERCC1-203ENST00000340192 LINC00304Q8N9R0 145 aa8.51□□□□□ -1.05
ERCC1-203ENST00000340192 LINC00308Q8TCZ7 52 aa8.51□□□□□ -1.05
ERCC1-203ENST00000340192 RNF213Q63HN8 5207 aa8.5□□□□□ -1.05
ERCC1-203ENST00000340192 ATOH7Q8N100 152 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms