RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 GVQW2A0A096LPI5 108 aaPredicted RBP14.82□□□□□ -0.04
PDLIM2-203ENST00000339162 UBE2DNLQ8IWF7 75 aa14.82□□□□□ -0.04
PDLIM2-203ENST00000339162 PPDPFLQ8WWR9 84 aa14.82□□□□□ -0.04
PDLIM2-203ENST00000339162 SMIM11BQ8TCY0 68 aa14.81□□□□□ -0.04
PDLIM2-203ENST00000339162 KRTAP1-5Q9BYS1 174 aa14.81□□□□□ -0.04
PDLIM2-203ENST00000339162 XAGE1AQ9HD64 81 aa14.81□□□□□ -0.04
PDLIM2-203ENST00000339162 DNAH1Q9P2D7 4330 aa14.8□□□□□ -0.04
PDLIM2-203ENST00000339162 LINC01620Q4KN68 170 aa14.8□□□□□ -0.04
PDLIM2-203ENST00000339162 CARD19Q96LW7 228 aa14.8□□□□□ -0.04
PDLIM2-203ENST00000339162 CDIP1Q9H305 208 aa14.79□□□□□ -0.04
PDLIM2-203ENST00000339162 NCR3O14931 201 aa14.78□□□□□ -0.04
PDLIM2-203ENST00000339162 LECT2O14960 151 aa14.78□□□□□ -0.04
PDLIM2-203ENST00000339162 M0QXV9 152 aa14.78□□□□□ -0.04
PDLIM2-203ENST00000339162 C2orf48Q96LS8 159 aa14.78□□□□□ -0.04
PDLIM2-203ENST00000339162 DNAH7Q8WXX0 4024 aa14.78□□□□□ -0.04
PDLIM2-203ENST00000339162 LST1O00453 97 aa14.77□□□□□ -0.04
PDLIM2-203ENST00000339162 RPL28P46779 137 aaKnown RBP14.77□□□□□ -0.04
PDLIM2-203ENST00000339162 SLC25A20O43772 301 aa14.77□□□□□ -0.05
PDLIM2-203ENST00000339162 DYNC2H1Q8NCM8 4307 aaKnown RBP14.77□□□□□ -0.05
PDLIM2-203ENST00000339162 NDUFC2O95298 119 aa14.76□□□□□ -0.05
PDLIM2-203ENST00000339162 USP17L23D6RBM5 183 aa14.76□□□□□ -0.05
PDLIM2-203ENST00000339162 PLECQ15149 4684 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-203ENST00000339162 NUPR2A6NF83 97 aa14.74□□□□□ -0.05
PDLIM2-203ENST00000339162 FAM218AQ96MZ4 157 aa14.74□□□□□ -0.05
PDLIM2-203ENST00000339162 SYCNQ0VAF6 134 aa14.74□□□□□ -0.05
PDLIM2-203ENST00000339162 RMI2Q96E14 147 aa14.74□□□□□ -0.05
PDLIM2-203ENST00000339162 A0A1B0GV72 72 aa14.73□□□□□ -0.05
PDLIM2-203ENST00000339162 GAGE2EQ4V326 116 aa14.73□□□□□ -0.05
PDLIM2-203ENST00000339162 ANKRD29Q8N6D5 301 aa14.73□□□□□ -0.05
PDLIM2-203ENST00000339162 MUC7Q8TAX7 377 aa14.73□□□□□ -0.05
PDLIM2-203ENST00000339162 GAGE2DQ9UEU5 116 aa14.73□□□□□ -0.05
PDLIM2-203ENST00000339162 SLPIP03973 132 aa14.72□□□□□ -0.05
PDLIM2-203ENST00000339162 NDUFC2-KCTD14E9PQ53 114 aa14.7□□□□□ -0.06
PDLIM2-203ENST00000339162 RPL18AQ02543 176 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-203ENST00000339162 LINC01600Q96MT4 127 aa14.7□□□□□ -0.06
PDLIM2-203ENST00000339162 TRBV10-2A0A0K0K1G8 114 aa14.69□□□□□ -0.06
PDLIM2-203ENST00000339162 Q6ZRP5 223 aa14.69□□□□□ -0.06
PDLIM2-203ENST00000339162 DNAH10Q8IVF4 4471 aa14.69□□□□□ -0.06
PDLIM2-203ENST00000339162 STARD9Q9P2P6 4700 aa14.69□□□□□ -0.06
PDLIM2-203ENST00000339162 TMEM126AQ9H061 195 aa14.68□□□□□ -0.06
PDLIM2-203ENST00000339162 S100A7L2Q5SY68 101 aa14.68□□□□□ -0.06
PDLIM2-203ENST00000339162 FBN3Q75N90 2809 aa14.67□□□□□ -0.06
PDLIM2-203ENST00000339162 XGP55808 180 aa14.66□□□□□ -0.06
PDLIM2-203ENST00000339162 A0A087WYN8 130 aa14.65□□□□□ -0.06
PDLIM2-203ENST00000339162 MT-ATP8P03928 68 aa14.65□□□□□ -0.06
PDLIM2-203ENST00000339162 KRTAP21-3Q3LHN1 58 aa14.65□□□□□ -0.06
PDLIM2-203ENST00000339162 F8WDY8 70 aa14.64□□□□□ -0.07
PDLIM2-203ENST00000339162 PSCAO43653 123 aa14.62□□□□□ -0.07
PDLIM2-203ENST00000339162 C9orf129Q5T035 196 aaKnown RBP14.61□□□□□ -0.07
PDLIM2-203ENST00000339162 H0YGX0 51 aa14.61□□□□□ -0.07
PDLIM2-203ENST00000339162 TRACP01848 142 aa14.61□□□□□ -0.07
PDLIM2-203ENST00000339162 VPREB1P12018 145 aa14.61□□□□□ -0.07
PDLIM2-203ENST00000339162 C6orf99Q4VX62 202 aa14.6□□□□□ -0.07
PDLIM2-203ENST00000339162 TRBV10-3A0A0K0K1G6 114 aa14.6□□□□□ -0.07
PDLIM2-203ENST00000339162 IGLV6-57P01721 117 aa14.59□□□□□ -0.07
PDLIM2-203ENST00000339162 H3BT86 120 aa14.58□□□□□ -0.07
PDLIM2-203ENST00000339162 NBDYA0A0U1RRE5 68 aa14.58□□□□□ -0.08
PDLIM2-203ENST00000339162 TEX49A0A1B0GTD5 131 aa14.58□□□□□ -0.08
PDLIM2-203ENST00000339162 TGP01266 2768 aa14.58□□□□□ -0.08
PDLIM2-203ENST00000339162 M0R2N4 97 aa14.55□□□□□ -0.08
PDLIM2-203ENST00000339162 BAALC-AS2P0C853 105 aa14.55□□□□□ -0.08
PDLIM2-203ENST00000339162 DNAL4O96015 105 aa14.54□□□□□ -0.08
PDLIM2-203ENST00000339162 TLX1NBP0CAT3 122 aa14.53□□□□□ -0.08
PDLIM2-203ENST00000339162 GAGE2BQ13066 116 aa14.53□□□□□ -0.08
PDLIM2-203ENST00000339162 SERTAD4-AS1Q5TG53 156 aa14.53□□□□□ -0.08
PDLIM2-203ENST00000339162 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.51□□□□□ -0.09
PDLIM2-203ENST00000339162 TRAV23DV6A0A075B6W5 121 aa14.51□□□□□ -0.09
PDLIM2-203ENST00000339162 FAM168BA1KXE4 195 aa14.51□□□□□ -0.09
PDLIM2-203ENST00000339162 M0R378 163 aa14.51□□□□□ -0.09
PDLIM2-203ENST00000339162 TTC32Q5I0X7 151 aa14.51□□□□□ -0.09
PDLIM2-203ENST00000339162 C22orf24Q9Y442 160 aa14.49□□□□□ -0.09
PDLIM2-203ENST00000339162 VPS13DQ5THJ4 4388 aa14.48□□□□□ -0.09
PDLIM2-203ENST00000339162 Q8N814 137 aa14.47□□□□□ -0.09
PDLIM2-203ENST00000339162 NKAPP1Q8N9T2 125 aa14.46□□□□□ -0.09
PDLIM2-203ENST00000339162 ZNF73O43830 326 aaPredicted RBP14.46□□□□□ -0.1
PDLIM2-203ENST00000339162 LOC107984640A0A0U1RRK4 108 aa14.45□□□□□ -0.1
PDLIM2-203ENST00000339162 Q6ZRN7 208 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-203ENST00000339162 DIRC1Q969H9 104 aa14.44□□□□□ -0.1
PDLIM2-203ENST00000339162 LINC00575Q6W349 94 aa14.43□□□□□ -0.1
PDLIM2-203ENST00000339162 KRTAP7-1Q8IUC3 87 aa14.43□□□□□ -0.1
PDLIM2-203ENST00000339162 LRCOL1A6NCL2 159 aa14.43□□□□□ -0.1
PDLIM2-203ENST00000339162 SNCGO76070 127 aa14.43□□□□□ -0.1
PDLIM2-203ENST00000339162 C7orf33Q8WU49 177 aa14.43□□□□□ -0.1
PDLIM2-203ENST00000339162 CNBPP62633 177 aaKnown RBP14.42□□□□□ -0.1
PDLIM2-203ENST00000339162 FAM19A5Q7Z5A7 132 aaPredicted RBP14.41□□□□□ -0.1
PDLIM2-203ENST00000339162 KMT2AQ03164 3969 aa14.4□□□□□ -0.1
PDLIM2-203ENST00000339162 IGKV2-24A0A0C4DH68 120 aa14.4□□□□□ -0.1
PDLIM2-203ENST00000339162 ORMDL1Q9P0S3 153 aa14.4□□□□□ -0.1
PDLIM2-203ENST00000339162 RPL37AP8A6NKH3 93 aa14.39□□□□□ -0.11
PDLIM2-203ENST00000339162 A0A096LNI7 61 aa14.39□□□□□ -0.11
PDLIM2-203ENST00000339162 FAM240AA0A1B0GVK7 77 aa14.39□□□□□ -0.11
PDLIM2-203ENST00000339162 A0A1B0GX51 115 aa14.39□□□□□ -0.11
PDLIM2-203ENST00000339162 C14orf177Q52M58 125 aa14.39□□□□□ -0.11
PDLIM2-203ENST00000339162 Q6Q795 121 aa14.39□□□□□ -0.11
PDLIM2-203ENST00000339162 hADV29S1A0JD25 119 aa14.38□□□□□ -0.11
PDLIM2-203ENST00000339162 LINC00167Q96N53 147 aa14.38□□□□□ -0.11
PDLIM2-203ENST00000339162 PLA2G2DQ9UNK4 145 aa14.38□□□□□ -0.11
PDLIM2-203ENST00000339162 ANAPC13Q9BS18 74 aa14.38□□□□□ -0.11
PDLIM2-203ENST00000339162 COX7BP24311 80 aa14.37□□□□□ -0.11
PDLIM2-203ENST00000339162 ELOF1P60002 83 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms