RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 TRAPPC1Q9Y5R8 145 aa9.12□□□□□ -0.95
LINC01116-202ENST00000339037 IGLV5-39A0A0G2JS06 123 aa9.11□□□□□ -0.95
LINC01116-202ENST00000339037 ZNF22P17026 224 aaPredicted RBP9.11□□□□□ -0.95
LINC01116-202ENST00000339037 KRTAP13-2Q52LG2 175 aa9.11□□□□□ -0.95
LINC01116-202ENST00000339037 KRTAP13-1Q8IUC0 172 aa9.11□□□□□ -0.95
LINC01116-202ENST00000339037 NKAPP1Q8N9T2 125 aa9.11□□□□□ -0.95
LINC01116-202ENST00000339037 IGLV5-37A0A075B6J1 123 aa9.1□□□□□ -0.95
LINC01116-202ENST00000339037 ATP5LO75964 103 aa9.1□□□□□ -0.95
LINC01116-202ENST00000339037 HBDP02042 147 aa9.1□□□□□ -0.95
LINC01116-202ENST00000339037 LINC00614P0C842 121 aa9.1□□□□□ -0.95
LINC01116-202ENST00000339037 FAM229BQ4G0N7 80 aa9.1□□□□□ -0.95
LINC01116-202ENST00000339037 LINC00304Q8N9R0 145 aa9.1□□□□□ -0.95
LINC01116-202ENST00000339037 MUC17Q685J3 4493 aa9.09□□□□□ -0.95
LINC01116-202ENST00000339037 SCO1O75880 301 aa9.09□□□□□ -0.95
LINC01116-202ENST00000339037 PFN2P35080 140 aa9.09□□□□□ -0.95
LINC01116-202ENST00000339037 KRTAP3-1Q9BYR8 98 aa9.09□□□□□ -0.95
LINC01116-202ENST00000339037 APOC3P02656 99 aa9.08□□□□□ -0.96
LINC01116-202ENST00000339037 IGKV2-28A0A075B6P5 120 aa9.07□□□□□ -0.96
LINC01116-202ENST00000339037 C11orf86A6NJI1 115 aa9.07□□□□□ -0.96
LINC01116-202ENST00000339037 IGKV2D-28P01615 120 aa9.07□□□□□ -0.96
LINC01116-202ENST00000339037 TPRXLQ17RH7 258 aa9.07□□□□□ -0.96
LINC01116-202ENST00000339037 IGKV2D-26A0A0A0MRZ7 120 aa9.06□□□□□ -0.96
LINC01116-202ENST00000339037 KRTAP4-12Q9BQ66 201 aa9.06□□□□□ -0.96
LINC01116-202ENST00000339037 ERG28Q9UKR5 140 aa9.06□□□□□ -0.96
LINC01116-202ENST00000339037 BAGE3Q86Y29 109 aa9.05□□□□□ -0.96
LINC01116-202ENST00000339037 ZNF625Q96I27 306 aaPredicted RBP9.05□□□□□ -0.96
LINC01116-202ENST00000339037 SND1-IT1Q9HBX3 110 aa9.05□□□□□ -0.96
LINC01116-202ENST00000339037 IGLV7-46A0A075B6I9 117 aa9.04□□□□□ -0.96
LINC01116-202ENST00000339037 SNAPINO95295 136 aa9.04□□□□□ -0.96
LINC01116-202ENST00000339037 VPREB1P12018 145 aa9.04□□□□□ -0.96
LINC01116-202ENST00000339037 PRLHP81277 87 aa9.04□□□□□ -0.96
LINC01116-202ENST00000339037 TMEM170BQ5T4T1 132 aa9.04□□□□□ -0.96
LINC01116-202ENST00000339037 SVBPQ8N300 66 aa9.03□□□□□ -0.96
LINC01116-202ENST00000339037 Q8NDZ9 215 aa9.03□□□□□ -0.96
LINC01116-202ENST00000339037 COX17Q14061 63 aa9.02□□□□□ -0.97
LINC01116-202ENST00000339037 YPEL4Q96NS1 127 aa9.02□□□□□ -0.97
LINC01116-202ENST00000339037 CTAG1AP78358 180 aa9.01□□□□□ -0.97
LINC01116-202ENST00000339037 NDUFA5Q16718 116 aa9.01□□□□□ -0.97
LINC01116-202ENST00000339037 FAM19A1Q7Z5A9 133 aa9.01□□□□□ -0.97
LINC01116-202ENST00000339037 TMEM126AQ9H061 195 aa9.01□□□□□ -0.97
LINC01116-202ENST00000339037 CHTOPQ9Y3Y2 248 aaKnown RBP9.01□□□□□ -0.97
LINC01116-202ENST00000339037 TMEM238C9JI98 176 aa9□□□□□ -0.97
LINC01116-202ENST00000339037 KRTAP9-6A0A140TA67 174 aa8.99□□□□□ -0.97
LINC01116-202ENST00000339037 RPL24P83731 157 aaKnown RBP8.98□□□□□ -0.97
LINC01116-202ENST00000339037 SFTA2Q6UW10 78 aa8.98□□□□□ -0.97
LINC01116-202ENST00000339037 TMEM223A0PJW6 202 aa8.97□□□□□ -0.97
LINC01116-202ENST00000339037 IFI27L1Q96BM0 104 aa8.97□□□□□ -0.97
LINC01116-202ENST00000339037 CHCHD1Q96BP2 118 aaKnown RBP8.97□□□□□ -0.97
LINC01116-202ENST00000339037 PLEKHB2Q96CS7 222 aa8.97□□□□□ -0.97
LINC01116-202ENST00000339037 PPDPFQ9H3Y8 114 aa8.97□□□□□ -0.97
LINC01116-202ENST00000339037 TRAV12-1A0A0B4J245 112 aa8.96□□□□□ -0.98
LINC01116-202ENST00000339037 A0A0U1RRA0 63 aa8.96□□□□□ -0.98
LINC01116-202ENST00000339037 M0R378 163 aa8.96□□□□□ -0.98
LINC01116-202ENST00000339037 TRIAP1O43715 76 aa8.96□□□□□ -0.98
LINC01116-202ENST00000339037 CBLN2Q8IUK8 224 aa8.96□□□□□ -0.98
LINC01116-202ENST00000339037 C3orf22Q8N5N4 141 aa8.96□□□□□ -0.98
LINC01116-202ENST00000339037 LINC00158P58513 81 aa8.95□□□□□ -0.98
LINC01116-202ENST00000339037 FAM19A2Q8N3H0 131 aa8.94□□□□□ -0.98
LINC01116-202ENST00000339037 HIGD2AQ9BW72 106 aa8.94□□□□□ -0.98
LINC01116-202ENST00000339037 SPAG11AQ6PDA7 123 aa8.93□□□□□ -0.98
LINC01116-202ENST00000339037 SMIM13P0DJ93 91 aa8.92□□□□□ -0.98
LINC01116-202ENST00000339037 HSBP1O75506 76 aa8.91□□□□□ -0.98
LINC01116-202ENST00000339037 FP248Q71RG6 208 aaPredicted RBP8.91□□□□□ -0.98
LINC01116-202ENST00000339037 H0Y8G0 127 aa8.89□□□□□ -0.99
LINC01116-202ENST00000339037 MEIG1Q5JSS6 88 aa8.89□□□□□ -0.99
LINC01116-202ENST00000339037 SPRR4Q96PI1 79 aa8.89□□□□□ -0.99
LINC01116-202ENST00000339037 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.88□□□□□ -0.99
LINC01116-202ENST00000339037 TRGC2P03986 189 aa8.88□□□□□ -0.99
LINC01116-202ENST00000339037 BOD1L2Q8IYS8 172 aa8.88□□□□□ -0.99
LINC01116-202ENST00000339037 MIR7-3HGQ8N6C7 128 aa8.88□□□□□ -0.99
LINC01116-202ENST00000339037 LINC00337Q8N6G1 96 aa8.88□□□□□ -0.99
LINC01116-202ENST00000339037 ZNF706Q9Y5V0 76 aaPredicted RBP8.88□□□□□ -0.99
LINC01116-202ENST00000339037 NCR3O14931 201 aa8.87□□□□□ -0.99
LINC01116-202ENST00000339037 ATP6V1G1O75348 118 aa8.87□□□□□ -0.99
LINC01116-202ENST00000339037 TSPEAR-AS2P59090 65 aa8.87□□□□□ -0.99
LINC01116-202ENST00000339037 NDUFA12Q9UI09 145 aa8.87□□□□□ -0.99
LINC01116-202ENST00000339037 SERF1AO75920 110 aa8.86□□□□□ -0.99
LINC01116-202ENST00000339037 HERV-K104P63124 156 aa8.86□□□□□ -0.99
LINC01116-202ENST00000339037 FSIP2Q5CZC0 6907 aa8.85□□□□□ -0.99
LINC01116-202ENST00000339037 PRYO14603 147 aa8.85□□□□□ -0.99
LINC01116-202ENST00000339037 LEPROTL1O95214 131 aa8.85□□□□□ -0.99
LINC01116-202ENST00000339037 KRTAP13-3Q3SY46 172 aa8.85□□□□□ -0.99
LINC01116-202ENST00000339037 Q8NBF4 154 aa8.85□□□□□ -0.99
LINC01116-202ENST00000339037 ASB16-AS1Q495Z4 193 aa8.84□□□□□ -0.99
LINC01116-202ENST00000339037 DAND5Q8N907 189 aa8.84□□□□□ -0.99
LINC01116-202ENST00000339037 MYMXA0A1B0GTQ4 84 aa8.83□□□□□ -1
LINC01116-202ENST00000339037 SPRR1AP35321 89 aa8.83□□□□□ -1
LINC01116-202ENST00000339037 TRBV10-3A0A0K0K1G6 114 aa8.82□□□□□ -1
LINC01116-202ENST00000339037 KRTAP4-16G5E9R7 235 aaPredicted RBP8.82□□□□□ -1
LINC01116-202ENST00000339037 LEPROTO15243 131 aa8.82□□□□□ -1
LINC01116-202ENST00000339037 LINC01547P58512 204 aaPredicted RBP8.82□□□□□ -1
LINC01116-202ENST00000339037 KCNQ1DNQ9H478 68 aa8.82□□□□□ -1
LINC01116-202ENST00000339037 LINC00587B1AMM8 73 aa8.81□□□□□ -1
LINC01116-202ENST00000339037 SPINK1P00995 79 aa8.81□□□□□ -1
LINC01116-202ENST00000339037 PMCHL2Q9BQD1 86 aa8.81□□□□□ -1
LINC01116-202ENST00000339037 MAP1LC3CQ9BXW4 147 aa8.81□□□□□ -1
LINC01116-202ENST00000339037 FABP4P15090 132 aa8.8□□□□□ -1
LINC01116-202ENST00000339037 PLNP26678 52 aa8.8□□□□□ -1
LINC01116-202ENST00000339037 J3QQQ9 107 aa8.79□□□□□ -1
LINC01116-202ENST00000339037 SEC61BP60468 96 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms