RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 Q9BRP9 147 aa5.7□□□□□ -1.5
TNPO1-201ENST00000337273 IGLV5-39A0A0G2JS06 123 aa5.7□□□□□ -1.5
TNPO1-201ENST00000337273 GCN1Q92616 2671 aaKnown RBP5.68□□□□□ -1.5
TNPO1-201ENST00000337273 ZNF292O60281 2723 aa5.68□□□□□ -1.5
TNPO1-201ENST00000337273 IGLV8-61A0A075B6I0 122 aa5.67□□□□□ -1.5
TNPO1-201ENST00000337273 SBSPONQ8IVN8 264 aa5.67□□□□□ -1.5
TNPO1-201ENST00000337273 IGHV6-1A0A0B4J1U7 121 aa5.67□□□□□ -1.5
TNPO1-201ENST00000337273 LY6G6DO95868 133 aa5.67□□□□□ -1.5
TNPO1-201ENST00000337273 IGLV5-45A0A087WSX0 123 aa5.67□□□□□ -1.5
TNPO1-201ENST00000337273 A0A087WSZ3 146 aa5.67□□□□□ -1.5
TNPO1-201ENST00000337273 KIF25-AS1Q9Y6Z4 181 aa5.67□□□□□ -1.5
TNPO1-201ENST00000337273 ITPR3Q14573 2671 aa5.66□□□□□ -1.5
TNPO1-201ENST00000337273 ACYP2P14621 99 aa5.66□□□□□ -1.5
TNPO1-201ENST00000337273 LINC00337Q8N6G1 96 aa5.66□□□□□ -1.5
TNPO1-201ENST00000337273 LOC110117498A0A087WWA1 95 aa5.66□□□□□ -1.5
TNPO1-201ENST00000337273 FHL3Q13643 280 aa5.66□□□□□ -1.5
TNPO1-201ENST00000337273 FAM19A4Q96LR4 140 aa5.65□□□□□ -1.5
TNPO1-201ENST00000337273 H3BNG1 76 aa5.65□□□□□ -1.5
TNPO1-201ENST00000337273 TEP1Q99973 2627 aaKnown RBP5.65□□□□□ -1.5
TNPO1-201ENST00000337273 LYPD5Q6UWN5 251 aa5.65□□□□□ -1.5
TNPO1-201ENST00000337273 CIRBP-AS1Q8TBR5 109 aa5.65□□□□□ -1.51
TNPO1-201ENST00000337273 TRANK1O15050 2925 aa5.65□□□□□ -1.51
TNPO1-201ENST00000337273 C1orf64Q8NEQ6 169 aa5.65□□□□□ -1.51
TNPO1-201ENST00000337273 Q6ZTC4 211 aa5.64□□□□□ -1.51
TNPO1-201ENST00000337273 PRO3102Q9H379 93 aa5.64□□□□□ -1.51
TNPO1-201ENST00000337273 FAM218AQ96MZ4 157 aa5.64□□□□□ -1.51
TNPO1-201ENST00000337273 SMCPP49901 116 aaPredicted RBP5.64□□□□□ -1.51
TNPO1-201ENST00000337273 IGHV3OR16-9A0A0B4J2B5 98 aa5.63□□□□□ -1.51
TNPO1-201ENST00000337273 A0A1B0GU69 56 aa5.63□□□□□ -1.51
TNPO1-201ENST00000337273 CDSNQ15517 529 aa5.63□□□□□ -1.51
TNPO1-201ENST00000337273 C11orf72Q8NBR9 251 aa5.63□□□□□ -1.51
TNPO1-201ENST00000337273 ELOF1P60002 83 aaKnown RBP5.63□□□□□ -1.51
TNPO1-201ENST00000337273 A0A0G2JQZ4 141 aa5.63□□□□□ -1.51
TNPO1-201ENST00000337273 A0A1W2PNN7 141 aa5.63□□□□□ -1.51
TNPO1-201ENST00000337273 SMCR5Q8TEV8 140 aa5.63□□□□□ -1.51
TNPO1-201ENST00000337273 FLNBO75369 2602 aaKnown RBP5.63□□□□□ -1.51
TNPO1-201ENST00000337273 PRO0461Q9UI25 63 aa5.62□□□□□ -1.51
TNPO1-201ENST00000337273 SPATA3Q8NHX4 192 aa5.62□□□□□ -1.51
TNPO1-201ENST00000337273 ERC2-IT1O76042 136 aa5.62□□□□□ -1.51
TNPO1-201ENST00000337273 IGLV5-52A0A0A0MRZ9 124 aa5.62□□□□□ -1.51
TNPO1-201ENST00000337273 Q6ZRU5 148 aa5.61□□□□□ -1.51
TNPO1-201ENST00000337273 SMIM29Q86T20 159 aa5.61□□□□□ -1.51
TNPO1-201ENST00000337273 AVPP01185 164 aa5.61□□□□□ -1.51
TNPO1-201ENST00000337273 MDFIQ99750 246 aa5.61□□□□□ -1.51
TNPO1-201ENST00000337273 C22orf24Q9Y442 160 aa5.61□□□□□ -1.51
TNPO1-201ENST00000337273 Q6ZQT0 140 aa5.6□□□□□ -1.51
TNPO1-201ENST00000337273 LINC00315P59091 139 aa5.6□□□□□ -1.51
TNPO1-201ENST00000337273 LINC01556Q5JQF7 62 aa5.6□□□□□ -1.51
TNPO1-201ENST00000337273 SPAG11AQ6PDA7 123 aa5.6□□□□□ -1.51
TNPO1-201ENST00000337273 VPREB1P12018 145 aa5.59□□□□□ -1.51
TNPO1-201ENST00000337273 COL6A5A8TX70 2615 aa5.59□□□□□ -1.51
TNPO1-201ENST00000337273 LY6G6CO95867 125 aa5.59□□□□□ -1.51
TNPO1-201ENST00000337273 NHLRC4P0CG21 123 aaPredicted RBP5.59□□□□□ -1.51
TNPO1-201ENST00000337273 CYP4F30PQ9H0H9 118 aa5.59□□□□□ -1.51
TNPO1-201ENST00000337273 SRCAPQ6ZRS2 3230 aa5.59□□□□□ -1.52
TNPO1-201ENST00000337273 KIAA0087Q14695 138 aa5.58□□□□□ -1.52
TNPO1-201ENST00000337273 FLNAP21333 2647 aaKnown RBP5.58□□□□□ -1.52
TNPO1-201ENST00000337273 FSHBP01225 129 aa5.58□□□□□ -1.52
TNPO1-201ENST00000337273 C8orf87E5RJ46 101 aa5.57□□□□□ -1.52
TNPO1-201ENST00000337273 TRAV22A0A0B4J277 110 aa5.57□□□□□ -1.52
TNPO1-201ENST00000337273 OXLD1Q5BKU9 147 aa5.57□□□□□ -1.52
TNPO1-201ENST00000337273 Q8NBF4 154 aa5.57□□□□□ -1.52
TNPO1-201ENST00000337273 UNC79Q9P2D8 2635 aa5.57□□□□□ -1.52
TNPO1-201ENST00000337273 C7orf65Q6ZTY9 151 aa5.57□□□□□ -1.52
TNPO1-201ENST00000337273 SPINT4Q6UDR6 99 aa5.57□□□□□ -1.52
TNPO1-201ENST00000337273 BAHCC1Q9P281 2608 aa5.56□□□□□ -1.52
TNPO1-201ENST00000337273 GVQW2A0A096LPI5 108 aaPredicted RBP5.56□□□□□ -1.52
TNPO1-201ENST00000337273 PRLHP81277 87 aa5.56□□□□□ -1.52
TNPO1-201ENST00000337273 SMR3AQ99954 134 aa5.56□□□□□ -1.52
TNPO1-201ENST00000337273 C6orf48Q9UBA6 75 aa5.56□□□□□ -1.52
TNPO1-201ENST00000337273 TRBV7-4A0A0J9YYF1 115 aa5.55□□□□□ -1.52
TNPO1-201ENST00000337273 MOBPQ13875 183 aa5.55□□□□□ -1.52
TNPO1-201ENST00000337273 C1orf134Q5TEV5 83 aa5.55□□□□□ -1.52
TNPO1-201ENST00000337273 KLK9Q2XQG4 91 aa5.55□□□□□ -1.52
TNPO1-201ENST00000337273 RPL37AP61513 92 aaKnown RBP5.55□□□□□ -1.52
TNPO1-201ENST00000337273 LOC101927531A0A1B0GV80 90 aa5.55□□□□□ -1.52
TNPO1-201ENST00000337273 Q6ZRX8 168 aa5.55□□□□□ -1.52
TNPO1-201ENST00000337273 DNAH12Q6ZR08 3092 aa5.54□□□□□ -1.52
TNPO1-201ENST00000337273 DMBT1Q9UGM3 2413 aaPredicted RBP5.54□□□□□ -1.52
TNPO1-201ENST00000337273 LINC00167Q96N53 147 aa5.53□□□□□ -1.52
TNPO1-201ENST00000337273 NBEAL2Q6ZNJ1 2754 aa5.53□□□□□ -1.52
TNPO1-201ENST00000337273 CEP350Q5VT06 3117 aa5.52□□□□□ -1.53
TNPO1-201ENST00000337273 A0A0C4DFX4 3053 aa5.52□□□□□ -1.53
TNPO1-201ENST00000337273 LINC00476Q8WZB0 136 aa5.52□□□□□ -1.53
TNPO1-201ENST00000337273 KLKP1Q107X0 134 aa5.51□□□□□ -1.53
TNPO1-201ENST00000337273 LINC00313P59037 77 aa5.51□□□□□ -1.53
TNPO1-201ENST00000337273 CFAP54Q96N23 3096 aa5.5□□□□□ -1.53
TNPO1-201ENST00000337273 C16orf90A8MZG2 172 aa5.5□□□□□ -1.53
TNPO1-201ENST00000337273 IGLV6-57P01721 117 aa5.5□□□□□ -1.53
TNPO1-201ENST00000337273 IGKV2D-30A0A075B6S6 120 aa5.49□□□□□ -1.53
TNPO1-201ENST00000337273 IGKV2-30P06310 120 aa5.49□□□□□ -1.53
TNPO1-201ENST00000337273 LITAFQ99732 161 aa5.49□□□□□ -1.53
TNPO1-201ENST00000337273 TM2D3Q9BRN9 247 aa5.49□□□□□ -1.53
TNPO1-201ENST00000337273 A8MWP4 228 aa5.49□□□□□ -1.53
TNPO1-201ENST00000337273 CFAP46Q8IYW2 2715 aa5.49□□□□□ -1.53
TNPO1-201ENST00000337273 ATP11AUNQ6ZP68 121 aa5.49□□□□□ -1.53
TNPO1-201ENST00000337273 NBEAL1Q6ZS30 2694 aa5.48□□□□□ -1.53
TNPO1-201ENST00000337273 CHTF8P0CG12 524 aa5.48□□□□□ -1.53
TNPO1-201ENST00000337273 COL4A2P08572 1712 aa5.48□□□□□ -1.53
TNPO1-201ENST00000337273 FAM229AH3BQW9 127 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms