RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 ZNF861PO60384 105 aa8.96□□□□□ -0.97
KATNA1-201ENST00000335643 TSPEAR-AS2P59090 65 aa8.96□□□□□ -0.97
KATNA1-201ENST00000335643 PMCHL2Q9BQD1 86 aa8.96□□□□□ -0.97
KATNA1-201ENST00000335643 IGKV2-28A0A075B6P5 120 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 HIST1H2BKO60814 126 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 GHRHP01286 108 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 IGKV2D-28P01615 120 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 HIST1H2BJP06899 126 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 HIST1H2BOP23527 126 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 HIST1H2BBP33778 126 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 HIST1H2BDP58876 126 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 HIST1H2BCP62807 126 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 HIST2H2BEQ16778 126 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.95□□□□□ -0.98
KATNA1-201ENST00000335643 NKAPP1Q8N9T2 125 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 HIST1H2BHQ93079 126 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 HIST1H2BNQ99877 126 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 HIST1H2BMQ99879 126 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 BCE1O60756 84 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 SFTA2Q6UW10 78 aa8.95□□□□□ -0.98
KATNA1-201ENST00000335643 SMIM13P0DJ93 91 aa8.94□□□□□ -0.98
KATNA1-201ENST00000335643 LINC00158P58513 81 aa8.94□□□□□ -0.98
KATNA1-201ENST00000335643 HSPB8Q9UJY1 196 aa8.94□□□□□ -0.98
KATNA1-201ENST00000335643 LPAP08519 4548 aa8.92□□□□□ -0.98
KATNA1-201ENST00000335643 IGLV1-50A0A075B6I6 118 aa8.92□□□□□ -0.98
KATNA1-201ENST00000335643 KRTAP13-1Q8IUC0 172 aa8.92□□□□□ -0.98
KATNA1-201ENST00000335643 NDUFA12Q9UI09 145 aa8.91□□□□□ -0.98
KATNA1-201ENST00000335643 TMEM238C9JI98 176 aa8.9□□□□□ -0.98
KATNA1-201ENST00000335643 DPM2O94777 84 aa8.9□□□□□ -0.98
KATNA1-201ENST00000335643 PLNP26678 52 aa8.9□□□□□ -0.98
KATNA1-201ENST00000335643 LEPROTO15243 131 aa8.9□□□□□ -0.99
KATNA1-201ENST00000335643 IGKCP01834 107 aa8.89□□□□□ -0.99
KATNA1-201ENST00000335643 RPL28P46779 137 aaKnown RBP8.89□□□□□ -0.99
KATNA1-201ENST00000335643 RPL24P83731 157 aaKnown RBP8.89□□□□□ -0.99
KATNA1-201ENST00000335643 MEIG1Q5JSS6 88 aa8.89□□□□□ -0.99
KATNA1-201ENST00000335643 MIR7-3HGQ8N6C7 128 aa8.89□□□□□ -0.99
KATNA1-201ENST00000335643 MAP1LC3CQ9BXW4 147 aa8.88□□□□□ -0.99
KATNA1-201ENST00000335643 TMEM126AQ9H061 195 aa8.88□□□□□ -0.99
KATNA1-201ENST00000335643 J3QQQ9 107 aa8.87□□□□□ -0.99
KATNA1-201ENST00000335643 M0R378 163 aa8.87□□□□□ -0.99
KATNA1-201ENST00000335643 EIF4EBP3O60516 100 aaPredicted RBP8.87□□□□□ -0.99
KATNA1-201ENST00000335643 HERV-K104P63124 156 aa8.87□□□□□ -0.99
KATNA1-201ENST00000335643 PRLHP81277 87 aa8.87□□□□□ -0.99
KATNA1-201ENST00000335643 A0A087X002 238 aa8.86□□□□□ -0.99
KATNA1-201ENST00000335643 MYMXA0A1B0GTQ4 84 aa8.86□□□□□ -0.99
KATNA1-201ENST00000335643 ANKRD39Q53RE8 183 aa8.86□□□□□ -0.99
KATNA1-201ENST00000335643 DAND5Q8N907 189 aa8.86□□□□□ -0.99
KATNA1-201ENST00000335643 RNF213Q63HN8 5207 aa8.86□□□□□ -0.99
KATNA1-201ENST00000335643 SYS1-DBNDD2H3BUS1 97 aa8.86□□□□□ -0.99
KATNA1-201ENST00000335643 PLEKHB2Q96CS7 222 aa8.86□□□□□ -0.99
KATNA1-201ENST00000335643 ANAPC11Q9NYG5 84 aa8.86□□□□□ -0.99
KATNA1-201ENST00000335643 UBE2AP49459 152 aa8.85□□□□□ -0.99
KATNA1-201ENST00000335643 BOD1L2Q8IYS8 172 aa8.85□□□□□ -0.99
KATNA1-201ENST00000335643 NCR3O14931 201 aa8.84□□□□□ -0.99
KATNA1-201ENST00000335643 FAM19A1Q7Z5A9 133 aa8.84□□□□□ -0.99
KATNA1-201ENST00000335643 HERVK_113P61574 105 aa8.83□□□□□ -1
KATNA1-201ENST00000335643 LOC105371267A0A1B0GV96 52 aa8.82□□□□□ -1
KATNA1-201ENST00000335643 LGALS3P17931 250 aaKnown RBP8.82□□□□□ -1
KATNA1-201ENST00000335643 COA6Q5JTJ3 125 aaKnown RBP8.82□□□□□ -1
KATNA1-201ENST00000335643 LINC01545Q5VT33 79 aa8.82□□□□□ -1
KATNA1-201ENST00000335643 E9PLD3 99 aa8.81□□□□□ -1
KATNA1-201ENST00000335643 C3orf79P0CE67 100 aa8.81□□□□□ -1
KATNA1-201ENST00000335643 RPL13AP40429 203 aaKnown RBP8.81□□□□□ -1
KATNA1-201ENST00000335643 LINC00587B1AMM8 73 aa8.8□□□□□ -1
KATNA1-201ENST00000335643 NMUP48645 174 aa8.8□□□□□ -1
KATNA1-201ENST00000335643 KRTAP13-2Q52LG2 175 aa8.8□□□□□ -1
KATNA1-201ENST00000335643 LOC107984156A0A0G2JMH3 177 aa8.79□□□□□ -1
KATNA1-201ENST00000335643 ADAMTSL4-AS1Q5T5F5 129 aa8.79□□□□□ -1
KATNA1-201ENST00000335643 ARL17AQ8IVW1 177 aa8.79□□□□□ -1
KATNA1-201ENST00000335643 A0A0J9YXY3 114 aa8.78□□□□□ -1
KATNA1-201ENST00000335643 PET117Q6UWS5 81 aa8.78□□□□□ -1
KATNA1-201ENST00000335643 SOSTDC1Q6X4U4 206 aa8.78□□□□□ -1
KATNA1-201ENST00000335643 IGKV2D-26A0A0A0MRZ7 120 aa8.78□□□□□ -1
KATNA1-201ENST00000335643 TRBV10-3A0A0K0K1G6 114 aa8.78□□□□□ -1
KATNA1-201ENST00000335643 CRYGAP11844 174 aa8.77□□□□□ -1.01
KATNA1-201ENST00000335643 SPRR1AP35321 89 aa8.77□□□□□ -1.01
KATNA1-201ENST00000335643 NPC2P61916 151 aa8.77□□□□□ -1.01
KATNA1-201ENST00000335643 TTTY13Q9BZ97 58 aa8.77□□□□□ -1.01
KATNA1-201ENST00000335643 KCNQ1DNQ9H478 68 aa8.77□□□□□ -1.01
KATNA1-201ENST00000335643 KRTAP4-16G5E9R7 235 aaPredicted RBP8.76□□□□□ -1.01
KATNA1-201ENST00000335643 PRYO14603 147 aa8.76□□□□□ -1.01
KATNA1-201ENST00000335643 KRTDAPP60985 99 aa8.76□□□□□ -1.01
KATNA1-201ENST00000335643 HIGD2AQ9BW72 106 aa8.76□□□□□ -1.01
KATNA1-201ENST00000335643 LITAFQ99732 161 aa8.75□□□□□ -1.01
KATNA1-201ENST00000335643 TYMSOSQ8TAI1 123 aa8.74□□□□□ -1.01
KATNA1-201ENST00000335643 FAM229BQ4G0N7 80 aa8.73□□□□□ -1.01
KATNA1-201ENST00000335643 LINC00337Q8N6G1 96 aa8.73□□□□□ -1.01
KATNA1-201ENST00000335643 TSPAN13O95857 204 aa8.72□□□□□ -1.01
KATNA1-201ENST00000335643 DDTP30046 118 aa8.72□□□□□ -1.01
KATNA1-201ENST00000335643 MIEN1Q9BRT3 115 aa8.72□□□□□ -1.01
KATNA1-201ENST00000335643 TRBV10-2A0A0K0K1G8 114 aa8.71□□□□□ -1.02
KATNA1-201ENST00000335643 SMCR5Q8TEV8 140 aa8.71□□□□□ -1.02
KATNA1-201ENST00000335643 SPANXB1Q9NS25 103 aaPredicted RBP8.71□□□□□ -1.02
KATNA1-201ENST00000335643 NDUFC2O95298 119 aa8.7□□□□□ -1.02
KATNA1-201ENST00000335643 ATOH7Q8N100 152 aa8.7□□□□□ -1.02
KATNA1-201ENST00000335643 C3orf22Q8N5N4 141 aa8.7□□□□□ -1.02
KATNA1-201ENST00000335643 SPRR4Q96PI1 79 aa8.7□□□□□ -1.02
KATNA1-201ENST00000335643 ZNF815PA8K554 130 aa8.69□□□□□ -1.02
KATNA1-201ENST00000335643 IGLV6-57P01721 117 aa8.69□□□□□ -1.02
KATNA1-201ENST00000335643 ETDCA0A1B0GVM5 59 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 454.3 ms