RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 LINC01546A6NGU7 62 aa4.43□□□□□ -1.7
CSMD1-201ENST00000335551 ADORA2A-AS1P86434 159 aa4.42□□□□□ -1.7
CSMD1-201ENST00000335551 COX6A2Q02221 97 aa4.42□□□□□ -1.7
CSMD1-201ENST00000335551 PRR3P79522 188 aaKnown RBP4.42□□□□□ -1.7
CSMD1-201ENST00000335551 SSBP3-AS1Q7Z2R9 100 aa4.42□□□□□ -1.7
CSMD1-201ENST00000335551 Q6ZSV7 163 aa4.42□□□□□ -1.7
CSMD1-201ENST00000335551 LINC00482Q8N8I6 264 aa4.42□□□□□ -1.7
CSMD1-201ENST00000335551 MDFIQ99750 246 aa4.42□□□□□ -1.7
CSMD1-201ENST00000335551 COX8CQ7Z4L0 72 aa4.42□□□□□ -1.7
CSMD1-201ENST00000335551 ITPR3Q14573 2671 aa4.42□□□□□ -1.7
CSMD1-201ENST00000335551 EDN2P20800 178 aa4.41□□□□□ -1.7
CSMD1-201ENST00000335551 LMO4P61968 165 aa4.41□□□□□ -1.7
CSMD1-201ENST00000335551 C11orf72Q8NBR9 251 aa4.41□□□□□ -1.7
CSMD1-201ENST00000335551 URB1-AS1Q96HZ7 61 aa4.41□□□□□ -1.7
CSMD1-201ENST00000335551 SPATA3Q8NHX4 192 aa4.4□□□□□ -1.7
CSMD1-201ENST00000335551 CRIPTQ9P021 101 aa4.4□□□□□ -1.7
CSMD1-201ENST00000335551 CRIP3Q6Q6R5 217 aa4.4□□□□□ -1.7
CSMD1-201ENST00000335551 IGLV2-18A0A075B6J9 118 aa4.4□□□□□ -1.71
CSMD1-201ENST00000335551 BAHCC1Q9P281 2608 aa4.4□□□□□ -1.71
CSMD1-201ENST00000335551 DEFB116Q30KQ4 102 aa4.39□□□□□ -1.71
CSMD1-201ENST00000335551 PRO0461Q9UI25 63 aa4.39□□□□□ -1.71
CSMD1-201ENST00000335551 UQCR11O14957 56 aa4.39□□□□□ -1.71
CSMD1-201ENST00000335551 FLNAP21333 2647 aaKnown RBP4.39□□□□□ -1.71
CSMD1-201ENST00000335551 STAB2Q8WWQ8 2551 aa4.39□□□□□ -1.71
CSMD1-201ENST00000335551 IGLV5-39A0A0G2JS06 123 aa4.39□□□□□ -1.71
CSMD1-201ENST00000335551 IGLV1-40P01703 118 aa4.39□□□□□ -1.71
CSMD1-201ENST00000335551 LINC01556Q5JQF7 62 aa4.39□□□□□ -1.71
CSMD1-201ENST00000335551 IGLV5-52A0A0A0MRZ9 124 aa4.39□□□□□ -1.71
CSMD1-201ENST00000335551 C6orf223Q8N319 242 aa4.38□□□□□ -1.71
CSMD1-201ENST00000335551 A0A096LNJ9 63 aa4.38□□□□□ -1.71
CSMD1-201ENST00000335551 FAM19A4Q96LR4 140 aa4.38□□□□□ -1.71
CSMD1-201ENST00000335551 Q8NA96 180 aa4.38□□□□□ -1.71
CSMD1-201ENST00000335551 Q6ZQT0 140 aa4.38□□□□□ -1.71
CSMD1-201ENST00000335551 CHD6Q8TD26 2715 aa4.38□□□□□ -1.71
CSMD1-201ENST00000335551 TM2D3Q9BRN9 247 aa4.38□□□□□ -1.71
CSMD1-201ENST00000335551 LOC101927531A0A1B0GV80 90 aa4.38□□□□□ -1.71
CSMD1-201ENST00000335551 MOBPQ13875 183 aa4.38□□□□□ -1.71
CSMD1-201ENST00000335551 GCN1Q92616 2671 aaKnown RBP4.37□□□□□ -1.71
CSMD1-201ENST00000335551 INAFM1C9JVW0 142 aa4.37□□□□□ -1.71
CSMD1-201ENST00000335551 LCA10Q71F78 164 aa4.37□□□□□ -1.71
CSMD1-201ENST00000335551 COL6A5A8TX70 2615 aa4.37□□□□□ -1.71
CSMD1-201ENST00000335551 KIAA0087Q14695 138 aa4.37□□□□□ -1.71
CSMD1-201ENST00000335551 ELOF1P60002 83 aaKnown RBP4.37□□□□□ -1.71
CSMD1-201ENST00000335551 PRR15Q8IV56 129 aa4.37□□□□□ -1.71
CSMD1-201ENST00000335551 LINC01600Q96MT4 127 aa4.37□□□□□ -1.71
CSMD1-201ENST00000335551 IGLV8-61A0A075B6I0 122 aa4.36□□□□□ -1.71
CSMD1-201ENST00000335551 A8MTW9 85 aa4.36□□□□□ -1.71
CSMD1-201ENST00000335551 HELZ2Q9BYK8 2649 aaKnown RBP4.36□□□□□ -1.71
CSMD1-201ENST00000335551 FHL2Q14192 279 aa4.36□□□□□ -1.71
CSMD1-201ENST00000335551 IGLV4-60A0A075B6I1 120 aa4.36□□□□□ -1.71
CSMD1-201ENST00000335551 Q8NBF4 154 aa4.36□□□□□ -1.71
CSMD1-201ENST00000335551 COA5Q86WW8 74 aa4.35□□□□□ -1.71
CSMD1-201ENST00000335551 ZNF580Q9UK33 172 aa4.35□□□□□ -1.71
CSMD1-201ENST00000335551 M0R2N4 97 aa4.35□□□□□ -1.71
CSMD1-201ENST00000335551 SMCPP49901 116 aaPredicted RBP4.35□□□□□ -1.71
CSMD1-201ENST00000335551 MIR22HGQ0VDD5 57 aa4.34□□□□□ -1.71
CSMD1-201ENST00000335551 COX6B2Q6YFQ2 88 aa4.34□□□□□ -1.71
CSMD1-201ENST00000335551 C1orf134Q5TEV5 83 aa4.34□□□□□ -1.71
CSMD1-201ENST00000335551 KLKP1Q107X0 134 aa4.34□□□□□ -1.72
CSMD1-201ENST00000335551 IGLV5-45A0A087WSX0 123 aa4.33□□□□□ -1.72
CSMD1-201ENST00000335551 LINC01006Q8NI28 216 aa4.33□□□□□ -1.72
CSMD1-201ENST00000335551 BRI3O95415 125 aa4.33□□□□□ -1.72
CSMD1-201ENST00000335551 C10orf99Q6UWK7 81 aa4.33□□□□□ -1.72
CSMD1-201ENST00000335551 LINC00336Q6ZUF6 198 aa4.33□□□□□ -1.72
CSMD1-201ENST00000335551 Q6ZRX8 168 aa4.32□□□□□ -1.72
CSMD1-201ENST00000335551 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
CSMD1-201ENST00000335551 FAM218AQ96MZ4 157 aa4.32□□□□□ -1.72
CSMD1-201ENST00000335551 A8MUN3 132 aa4.32□□□□□ -1.72
CSMD1-201ENST00000335551 UNC79Q9P2D8 2635 aa4.32□□□□□ -1.72
CSMD1-201ENST00000335551 TRBV7-4A0A0J9YYF1 115 aa4.32□□□□□ -1.72
CSMD1-201ENST00000335551 A8MWP4 228 aa4.32□□□□□ -1.72
CSMD1-201ENST00000335551 ODF3L2Q3SX64 289 aa4.31□□□□□ -1.72
CSMD1-201ENST00000335551 A0A1W2PNU3 283 aaPredicted RBP4.31□□□□□ -1.72
CSMD1-201ENST00000335551 C11orf71Q6IPW1 123 aa4.31□□□□□ -1.72
CSMD1-201ENST00000335551 SMCR5Q8TEV8 140 aa4.31□□□□□ -1.72
CSMD1-201ENST00000335551 LINC00313P59037 77 aa4.31□□□□□ -1.72
CSMD1-201ENST00000335551 C22orf24Q9Y442 160 aa4.3□□□□□ -1.72
CSMD1-201ENST00000335551 IGHV3OR16-9A0A0B4J2B5 98 aa4.3□□□□□ -1.72
CSMD1-201ENST00000335551 IGLV1-51P01701 117 aa4.29□□□□□ -1.72
CSMD1-201ENST00000335551 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
CSMD1-201ENST00000335551 WIPF1O43516 503 aa4.29□□□□□ -1.72
CSMD1-201ENST00000335551 LY6G6DO95868 133 aa4.29□□□□□ -1.72
CSMD1-201ENST00000335551 Q6ZRU5 148 aa4.29□□□□□ -1.72
CSMD1-201ENST00000335551 Q6ZSN1 163 aa4.29□□□□□ -1.72
CSMD1-201ENST00000335551 LINC01554Q52M75 96 aa4.29□□□□□ -1.72
CSMD1-201ENST00000335551 LINC00476Q8WZB0 136 aa4.29□□□□□ -1.72
CSMD1-201ENST00000335551 EPM2AB3EWF7 344 aa4.29□□□□□ -1.72
CSMD1-201ENST00000335551 LYPD5Q6UWN5 251 aa4.29□□□□□ -1.72
CSMD1-201ENST00000335551 C19orf84I3L1E1 186 aa4.28□□□□□ -1.72
CSMD1-201ENST00000335551 C18orf65Q6ZTR6 163 aa4.28□□□□□ -1.72
CSMD1-201ENST00000335551 SPANXA2-OT1Q8N9U9 137 aa4.27□□□□□ -1.73
CSMD1-201ENST00000335551 TEX15Q9BXT5 2789 aa4.27□□□□□ -1.73
CSMD1-201ENST00000335551 SPACA4Q8TDM5 124 aa4.27□□□□□ -1.73
CSMD1-201ENST00000335551 KIF25-AS1Q9Y6Z4 181 aa4.27□□□□□ -1.73
CSMD1-201ENST00000335551 H7BZZ5 65 aa4.27□□□□□ -1.73
CSMD1-201ENST00000335551 MAP1AP78559 2803 aaPredicted RBP4.27□□□□□ -1.73
CSMD1-201ENST00000335551 APLNQ9ULZ1 77 aa4.26□□□□□ -1.73
CSMD1-201ENST00000335551 LINC00167Q96N53 147 aa4.26□□□□□ -1.73
CSMD1-201ENST00000335551 PRO3102Q9H379 93 aa4.25□□□□□ -1.73
CSMD1-201ENST00000335551 H3BS24 57 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms